RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 RASL12Q9NYN1 266 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 KCNIP1Q9NZI2 227 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 MTCH1Q9NZJ7 389 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 RCC2Q9P258 522 aaKnown RBP5.14□□□□□ -1.59
VPS50-205ENST00000441602 Q9UFV3 132 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 DUSP13Q9UII6 198 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 TINAGQ9UJW2 476 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 TEX13DA0A0J9YY54 714 aaPredicted RBP5.14□□□□□ -1.59
VPS50-205ENST00000441602 NOS1APO75052 506 aaPredicted RBP5.14□□□□□ -1.59
VPS50-205ENST00000441602 IFNA21P01568 189 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 PGA5P0DJD9 388 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 NPBWR2P48146 333 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 NPY4RP50391 375 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 SHEQ5VZ18 495 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 SIGIRRQ6IA17 410 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 GSG1LQ6UXU4 331 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 OVCH2Q7RTZ1 564 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 FAM185AQ8N0U4 392 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 OR11H7Q8NGC8 314 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 CASTOR1Q8WTX7 329 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 DOCK7Q96N67 2140 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 ZNF2Q9BSG1 426 aaPredicted RBP5.14□□□□□ -1.59
VPS50-205ENST00000441602 GON7Q9BXV9 100 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 SLC23A1Q9UHI7 598 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 GPR132Q9UNW8 380 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 OSGIN2Q9Y236 505 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 VSIG4Q9Y279 399 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 NPTNQ9Y639 398 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 CEACAM18A8MTB9 384 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 SFT2D2O95562 160 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 DUS4LO95620 317 aaKnown RBP5.14□□□□□ -1.59
VPS50-205ENST00000441602 NUP62P37198 522 aaPredicted RBP5.14□□□□□ -1.59
VPS50-205ENST00000441602 CD200P41217 278 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 ERVS71-1P61550 626 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 SRPXP78539 464 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 DHRS2Q13268 280 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 NLRC3Q7RTR2 1065 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 FAM90A1Q86YD7 464 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 MUC20Q8N307 709 aaPredicted RBP5.14□□□□□ -1.59
VPS50-205ENST00000441602 GRPEL2Q8TAA5 225 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 MAFIPQ8WZ33 124 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 DPCDQ9BVM2 203 aaPredicted RBP5.14□□□□□ -1.59
VPS50-205ENST00000441602 DLL4Q9NR61 685 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 NDRG3Q9UGV2 375 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 ZNF230Q9UIE0 474 aaPredicted RBP5.14□□□□□ -1.59
VPS50-205ENST00000441602 ATP23Q9Y6H3 246 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 FREM1Q5H8C1 2179 aa5.14□□□□□ -1.59
VPS50-205ENST00000441602 CACNA1GO43497 2377 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 TRBV6-6A0A0A6YYG2 114 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 C9orf170A2RU37 121 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 TRDCB7Z8K6 153 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 SDCBPO00560 298 aaPredicted RBP5.13□□□□□ -1.59
VPS50-205ENST00000441602 KNG1P01042 644 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 IGHV3-13P01766 116 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 IRF2P14316 349 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 ZNF250P15622 560 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 GLRA1P23415 457 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 ZBTB25P24278 435 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 CD40P25942 277 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 CA7P43166 264 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 NKX2-5P52952 324 aaPredicted RBP5.13□□□□□ -1.59
VPS50-205ENST00000441602 UCP3P55916 312 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 FAM76BQ5HYJ3 339 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 TRAT1Q6PIZ9 186 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 MYPOPQ86VE0 399 aaPredicted RBP5.13□□□□□ -1.59
VPS50-205ENST00000441602 SLC38A6Q8IZM9 456 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 RPRMLQ8N4K4 120 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 SUMF2Q8NBJ7 301 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 OR5T2Q8NGG2 359 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 ELMOD3Q96FG2 381 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 NRIP2Q9BQI9 281 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 TREM2Q9NZC2 230 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 POU2F3Q9UKI9 436 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 HSPB11Q9Y547 144 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 TMEM30CPA0ZSE6 113 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 C5orf51A6NDU8 294 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 OR2AT4A6NND4 320 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 CDIPTO14735 213 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 FAM27E3Q08E93 113 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 ZNF154Q13106 437 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 VHLLQ6RSH7 139 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 LHFPL1Q86WI0 220 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 ASCC1Q8N9N2 400 aaKnown RBP5.13□□□□□ -1.59
VPS50-205ENST00000441602 NUP37Q8NFH4 326 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 OR2Z1Q8NG97 314 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 OR52B4Q8NGK2 314 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 MITD1Q8WV92 249 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 RDH5Q92781 318 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 ERGIC1Q969X5 290 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 FGF23Q9GZV9 251 aaPredicted RBP5.13□□□□□ -1.59
VPS50-205ENST00000441602 ESRP2Q9H6T0 727 aaKnown RBP5.13□□□□□ -1.59
VPS50-205ENST00000441602 Q9N2K0 584 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 C1orf123Q9NWV4 160 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 TAAR3PQ9P1P4 343 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 DNAJB11Q9UBS4 358 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 ATP6V1G2-DDX39BF2Z307 99 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 IFNL4K9M1U5 179 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 L7N2F9 121 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 OR2A4O95047 310 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 HAND1O96004 215 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms