RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 GINS3Q9BRX5 216 aa13.9□□□□□ -0.18
DHFR-201ENST00000439211 NSG2Q9Y328 171 aa13.9□□□□□ -0.18
DHFR-201ENST00000439211 GVINP1Q7Z2Y8 2422 aa13.9□□□□□ -0.18
DHFR-201ENST00000439211 LMX1BO60663 402 aa13.89□□□□□ -0.19
DHFR-201ENST00000439211 MT-ATP6P00846 226 aa13.89□□□□□ -0.19
DHFR-201ENST00000439211 LCATP04180 440 aa13.89□□□□□ -0.19
DHFR-201ENST00000439211 RAC1P63000 192 aa13.89□□□□□ -0.19
DHFR-201ENST00000439211 INSM1Q01101 510 aaPredicted RBP13.89□□□□□ -0.19
DHFR-201ENST00000439211 HIKESHIQ53FT3 197 aa13.89□□□□□ -0.19
DHFR-201ENST00000439211 GRINAQ7Z429 371 aa13.89□□□□□ -0.19
DHFR-201ENST00000439211 CMTM1Q8IZ96 169 aa13.89□□□□□ -0.19
DHFR-201ENST00000439211 TMEM217Q8N7C4 229 aa13.89□□□□□ -0.19
DHFR-201ENST00000439211 TWSG1Q9GZX9 223 aa13.89□□□□□ -0.19
DHFR-201ENST00000439211 ABHD16AO95870 558 aa13.89□□□□□ -0.19
DHFR-201ENST00000439211 IGHV4-34P06331 123 aa13.89□□□□□ -0.19
DHFR-201ENST00000439211 CEACAM1P13688 526 aa13.89□□□□□ -0.19
DHFR-201ENST00000439211 BCKDHBP21953 392 aa13.89□□□□□ -0.19
DHFR-201ENST00000439211 ZNF92Q03936 586 aa13.89□□□□□ -0.19
DHFR-201ENST00000439211 RTN4RQ9BZR6 473 aa13.89□□□□□ -0.19
DHFR-201ENST00000439211 NCOR1P1Q9H4R4 102 aa13.89□□□□□ -0.19
DHFR-201ENST00000439211 FRG2CA6NGY1 282 aa13.89□□□□□ -0.19
DHFR-201ENST00000439211 H0YIG0 161 aa13.89□□□□□ -0.19
DHFR-201ENST00000439211 SERPINA7P05543 415 aa13.89□□□□□ -0.19
DHFR-201ENST00000439211 TMEM268Q5VZI3 342 aa13.89□□□□□ -0.19
DHFR-201ENST00000439211 S100A7AQ86SG5 101 aa13.89□□□□□ -0.19
DHFR-201ENST00000439211 VAX2Q9UIW0 290 aa13.89□□□□□ -0.19
DHFR-201ENST00000439211 FAM157AC9JC47 383 aa13.88□□□□□ -0.19
DHFR-201ENST00000439211 MPV17LQ2QL34 196 aa13.88□□□□□ -0.19
DHFR-201ENST00000439211 C1orf185Q5T7R7 199 aa13.88□□□□□ -0.19
DHFR-201ENST00000439211 OR14L1PQ8NHC6 308 aa13.88□□□□□ -0.19
DHFR-201ENST00000439211 ZFP30Q9Y2G7 519 aa13.88□□□□□ -0.19
DHFR-201ENST00000439211 A0A1W2PNV4 684 aa13.88□□□□□ -0.19
DHFR-201ENST00000439211 CEBPZOSA8MTT3 80 aa13.88□□□□□ -0.19
DHFR-201ENST00000439211 ZNF93P35789 620 aaPredicted RBP13.88□□□□□ -0.19
DHFR-201ENST00000439211 DAP3P51398 398 aaKnown RBP13.88□□□□□ -0.19
DHFR-201ENST00000439211 RANP62826 216 aaKnown RBP13.88□□□□□ -0.19
DHFR-201ENST00000439211 TLE1Q04724 770 aa13.88□□□□□ -0.19
DHFR-201ENST00000439211 DPPA3Q6W0C5 159 aa13.88□□□□□ -0.19
DHFR-201ENST00000439211 OR51E1Q8TCB6 317 aa13.88□□□□□ -0.19
DHFR-201ENST00000439211 B3GALT5Q9Y2C3 310 aa13.88□□□□□ -0.19
DHFR-201ENST00000439211 R4GMQ9 66 aa13.88□□□□□ -0.19
DHFR-201ENST00000439211 ZNF708P17019 499 aa13.88□□□□□ -0.19
DHFR-201ENST00000439211 HSD11B2P80365 405 aa13.88□□□□□ -0.19
DHFR-201ENST00000439211 RPL19P84098 196 aaKnown RBP13.88□□□□□ -0.19
DHFR-201ENST00000439211 P2RY6Q15077 328 aa13.88□□□□□ -0.19
DHFR-201ENST00000439211 C1orf194Q5T5A4 169 aa13.88□□□□□ -0.19
DHFR-201ENST00000439211 VN1R17PQ8TDU5 208 aa13.88□□□□□ -0.19
DHFR-201ENST00000439211 SH3BGRL2Q9UJC5 107 aa13.88□□□□□ -0.19
DHFR-201ENST00000439211 A0A087WWC5 75 aa13.87□□□□□ -0.19
DHFR-201ENST00000439211 TRBV5-7A0A0A0MS05 114 aa13.87□□□□□ -0.19
DHFR-201ENST00000439211 A0A1W2PPC4 97 aa13.87□□□□□ -0.19
DHFR-201ENST00000439211 HSBP1L1C9JCN9 74 aa13.87□□□□□ -0.19
DHFR-201ENST00000439211 OR5G3P0C626 314 aa13.87□□□□□ -0.19
DHFR-201ENST00000439211 HNRNPA3P51991 378 aaKnown RBP13.87□□□□□ -0.19
DHFR-201ENST00000439211 DCAF7P61962 342 aa13.87□□□□□ -0.19
DHFR-201ENST00000439211 SUMF1Q8NBK3 374 aa13.87□□□□□ -0.19
DHFR-201ENST00000439211 OR52N4Q8NGI2 321 aa13.87□□□□□ -0.19
DHFR-201ENST00000439211 HBE1P02100 147 aa13.87□□□□□ -0.19
DHFR-201ENST00000439211 IL11P20809 199 aa13.87□□□□□ -0.19
DHFR-201ENST00000439211 MCHR2Q969V1 340 aa13.87□□□□□ -0.19
DHFR-201ENST00000439211 BTF3L4Q96K17 158 aa13.87□□□□□ -0.19
DHFR-201ENST00000439211 WWTR1Q9GZV5 400 aa13.87□□□□□ -0.19
DHFR-201ENST00000439211 CCL20P78556 96 aa13.87□□□□□ -0.19
DHFR-201ENST00000439211 LCN15Q6UWW0 184 aa13.87□□□□□ -0.19
DHFR-201ENST00000439211 OR5L2Q8NGL0 311 aa13.87□□□□□ -0.19
DHFR-201ENST00000439211 CNTD2Q9H8S5 307 aa13.87□□□□□ -0.19
DHFR-201ENST00000439211 FGF21Q9NSA1 209 aa13.87□□□□□ -0.19
DHFR-201ENST00000439211 A8MXE2 369 aa13.86□□□□□ -0.19
DHFR-201ENST00000439211 F5H5K5 113 aa13.86□□□□□ -0.19
DHFR-201ENST00000439211 BRS3P32247 399 aa13.86□□□□□ -0.19
DHFR-201ENST00000439211 ZNF266Q14584 549 aa13.86□□□□□ -0.19
DHFR-201ENST00000439211 ZNF684Q5T5D7 378 aa13.86□□□□□ -0.19
DHFR-201ENST00000439211 SLAMF6Q96DU3 332 aa13.86□□□□□ -0.19
DHFR-201ENST00000439211 PPIAL4AQ9Y536 164 aa13.86□□□□□ -0.19
DHFR-201ENST00000439211 A0A0U1RQK1 487 aa13.86□□□□□ -0.19
DHFR-201ENST00000439211 BGLAPP02818 100 aa13.86□□□□□ -0.19
DHFR-201ENST00000439211 P2RY1P47900 373 aa13.86□□□□□ -0.19
DHFR-201ENST00000439211 FXYD4P59646 89 aa13.86□□□□□ -0.19
DHFR-201ENST00000439211 SP6Q3SY56 376 aa13.86□□□□□ -0.19
DHFR-201ENST00000439211 GLIPR1L1Q6UWM5 242 aa13.86□□□□□ -0.19
DHFR-201ENST00000439211 H1FNTQ75WM6 255 aaPredicted RBP13.86□□□□□ -0.19
DHFR-201ENST00000439211 PLXDC1Q8IUK5 500 aa13.86□□□□□ -0.19
DHFR-201ENST00000439211 SLC22A24Q8N4F4 322 aa13.86□□□□□ -0.19
DHFR-201ENST00000439211 NUDT10Q8NFP7 164 aa13.86□□□□□ -0.19
DHFR-201ENST00000439211 ZNF596Q8TC21 504 aa13.86□□□□□ -0.19
DHFR-201ENST00000439211 SLC35E1Q96K37 410 aa13.86□□□□□ -0.19
DHFR-201ENST00000439211 MSL2Q9HCI7 577 aa13.86□□□□□ -0.19
DHFR-201ENST00000439211 AQP7P3A6NL99 342 aa13.86□□□□□ -0.19
DHFR-201ENST00000439211 DUX1O43812 170 aa13.86□□□□□ -0.19
DHFR-201ENST00000439211 KLF3P57682 345 aaPredicted RBP13.86□□□□□ -0.19
DHFR-201ENST00000439211 HSF1Q00613 529 aa13.86□□□□□ -0.19
DHFR-201ENST00000439211 MEX3BQ6ZN04 569 aaKnown RBP13.86□□□□□ -0.19
DHFR-201ENST00000439211 NUFIP2Q7Z417 695 aaKnown RBP13.86□□□□□ -0.19
DHFR-201ENST00000439211 NUDT11Q96G61 164 aa13.86□□□□□ -0.19
DHFR-201ENST00000439211 B4DEV8 164 aa13.85□□□□□ -0.19
DHFR-201ENST00000439211 Q6ZN92 141 aa13.85□□□□□ -0.19
DHFR-201ENST00000439211 SLC35E3Q7Z769 313 aa13.85□□□□□ -0.19
DHFR-201ENST00000439211 UEVLDQ8IX04 471 aa13.85□□□□□ -0.19
DHFR-201ENST00000439211 LRRC75AQ8NAA5 344 aa13.85□□□□□ -0.19
DHFR-201ENST00000439211 DDIT4LQ96D03 193 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms