RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 OR51H1Q8NH63 302 aa10.11□□□□□ -0.79
TRAPPC9-202ENST00000438773 EXTL1Q92935 676 aa10.11□□□□□ -0.79
TRAPPC9-202ENST00000438773 AKR1E2Q96JD6 320 aa10.11□□□□□ -0.79
TRAPPC9-202ENST00000438773 NPDC1Q9NQX5 325 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC9-202ENST00000438773 GLRX2Q9NS18 164 aa10.11□□□□□ -0.79
TRAPPC9-202ENST00000438773 CELA3AP09093 270 aa10.11□□□□□ -0.79
TRAPPC9-202ENST00000438773 TESK1Q15569 626 aa10.11□□□□□ -0.79
TRAPPC9-202ENST00000438773 OR8B8Q15620 311 aa10.11□□□□□ -0.79
TRAPPC9-202ENST00000438773 Q6ZRG5 221 aa10.11□□□□□ -0.79
TRAPPC9-202ENST00000438773 LGI3Q8N145 548 aa10.11□□□□□ -0.79
TRAPPC9-202ENST00000438773 ZNF709Q8N972 641 aa10.11□□□□□ -0.79
TRAPPC9-202ENST00000438773 PLK3Q9H4B4 646 aa10.11□□□□□ -0.79
TRAPPC9-202ENST00000438773 H2BFSP57053 126 aa10.11□□□□□ -0.79
TRAPPC9-202ENST00000438773 ZNF273Q14593 569 aa10.11□□□□□ -0.79
TRAPPC9-202ENST00000438773 OR4D10Q8NGI6 311 aa10.11□□□□□ -0.79
TRAPPC9-202ENST00000438773 CHST5Q9GZS9 411 aa10.11□□□□□ -0.79
TRAPPC9-202ENST00000438773 SHARPINQ9H0F6 387 aa10.11□□□□□ -0.79
TRAPPC9-202ENST00000438773 PIGMQ9H3S5 423 aa10.11□□□□□ -0.79
TRAPPC9-202ENST00000438773 TAF9BQ9HBM6 251 aa10.11□□□□□ -0.79
TRAPPC9-202ENST00000438773 FZR1Q9UM11 496 aa10.11□□□□□ -0.79
TRAPPC9-202ENST00000438773 TRBV5-7A0A0A0MS05 114 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 AGFG2O95081 481 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 IL5P05113 134 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 PSMB6P28072 239 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 RIPPLY2Q5TAB7 128 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 DCAF12L2Q5VW00 463 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 LILRB2Q8N423 598 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 FDCSPQ8NFU4 85 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 SHANK1Q9Y566 2161 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 TGM6O95932 706 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 CTXN2P0C2S0 81 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 FSTP19883 344 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 PLAURQ03405 335 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 ACOT7LQ6ZUV0 252 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 TMEM123Q8N131 208 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 KIF25Q9UIL4 384 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 PHF3Q92576 2039 aaKnown RBP10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 HSD17B6O14756 317 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 ISG15P05161 165 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 GABRA1P14867 456 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 PPP1CBP62140 327 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 ALKBH6Q3KRA9 238 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 FDX2Q6P4F2 183 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 LYG2Q86SG7 212 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 BAP18Q8IXM2 172 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 SFT2D1Q8WV19 159 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 RGP1Q92546 391 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 MAGT1Q9H0U3 335 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 FAM206AQ9NX38 181 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 ATP23Q9Y6H3 246 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 ZFP92A6NM28 416 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 WDR1O75083 606 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 TUSC2O75896 110 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 VSIG10L2P0DP72 767 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 KLK2P20151 261 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 ERVK-16P61578 105 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 SLC25A53Q5H9E4 307 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 HIST2H3AQ71DI3 136 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 C10orf35Q96D05 121 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 OR5B12Q96R08 314 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 SMCO4Q9NRQ5 59 aa10.1□□□□□ -0.79
TRAPPC9-202ENST00000438773 A0A0U1RQV5 110 aa10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 PRR32B1ATL7 298 aa10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 PDCD6O75340 191 aa10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 ADAP1O75689 374 aa10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 KCNJ3P48549 501 aa10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 SRPXP78539 464 aa10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 FLI1Q01543 452 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 CATR1Q13166 79 aa10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 SSX9Q7RTT3 188 aa10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 RTN4IP1Q8WWV3 396 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 GMPPAQ96IJ6 420 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 G6PC2Q9NQR9 355 aa10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 INTS1Q8N201 2190 aaKnown RBP10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 A0A1W2PP11 408 aa10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 TERTO14746 1132 aaKnown RBP10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 TAGLN2P37802 199 aaKnown RBP10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 SUCLG1P53597 346 aaKnown RBP10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 TMEM128Q5BJH2 165 aa10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 ZNF385CQ66K41 422 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 DECR2Q9NUI1 292 aa10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 LY6G6EA0A0G2JKS1 128 aa10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 MEX3AA1L020 520 aaKnown RBP10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 SPINT2O43291 252 aa10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 EFNA2O43921 213 aa10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 PIGPP57054 158 aa10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 DHRS2Q13268 280 aa10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 TMEM182Q6ZP80 229 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 C17orf78Q8N4C9 275 aa10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 NECAP1Q8NC96 275 aa10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 SGK3Q96BR1 496 aa10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 ZNF703Q9H7S9 590 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 U3KQA8 63 aa10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 REV3LO60673 3130 aa10.09□□□□□ -0.79
TRAPPC9-202ENST00000438773 FAM74A7A6NL05 159 aa10.08□□□□□ -0.8
TRAPPC9-202ENST00000438773 H3BP45 60 aa10.08□□□□□ -0.8
TRAPPC9-202ENST00000438773 CYTIPO60759 359 aa10.08□□□□□ -0.8
TRAPPC9-202ENST00000438773 FAM74A3Q4VXF1 159 aa10.08□□□□□ -0.8
TRAPPC9-202ENST00000438773 CISD2Q8N5K1 135 aaKnown RBP10.08□□□□□ -0.8
TRAPPC9-202ENST00000438773 TMEM104Q8NE00 496 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms