RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 MST1LQ2TV78 715 aa16■□□□□ 0.15
CLK1-205ENST00000434813 OR2A2Q6IF42 318 aa16■□□□□ 0.15
CLK1-205ENST00000434813 IL34Q6ZMJ4 242 aa16■□□□□ 0.15
CLK1-205ENST00000434813 Q6ZS49 121 aa16■□□□□ 0.15
CLK1-205ENST00000434813 IL22RA1Q8N6P7 574 aa16■□□□□ 0.15
CLK1-205ENST00000434813 HPSE2Q8WWQ2 592 aa16■□□□□ 0.15
CLK1-205ENST00000434813 APH1AQ96BI3 265 aa16■□□□□ 0.15
CLK1-205ENST00000434813 SMIM8Q96KF7 97 aa16■□□□□ 0.15
CLK1-205ENST00000434813 TAF9BQ9HBM6 251 aa16■□□□□ 0.15
CLK1-205ENST00000434813 ZC4H2Q9NQZ6 224 aa16■□□□□ 0.15
CLK1-205ENST00000434813 ZNF503-AS2A6NEH8 195 aa15.99■□□□□ 0.15
CLK1-205ENST00000434813 ZNF705EA8MWA4 302 aaPredicted RBP15.99■□□□□ 0.15
CLK1-205ENST00000434813 TRIM77I1YAP6 450 aa15.99■□□□□ 0.15
CLK1-205ENST00000434813 DNASE2O00115 360 aaPredicted RBP15.99■□□□□ 0.15
CLK1-205ENST00000434813 CST4P01036 141 aa15.99■□□□□ 0.15
CLK1-205ENST00000434813 FTH1P19P0C7X4 201 aa15.99■□□□□ 0.15
CLK1-205ENST00000434813 FOXG1P55316 489 aaPredicted RBP15.99■□□□□ 0.15
CLK1-205ENST00000434813 PDCD1Q15116 288 aa15.99■□□□□ 0.15
CLK1-205ENST00000434813 SP6Q3SY56 376 aa15.99■□□□□ 0.15
CLK1-205ENST00000434813 TMEM268Q5VZI3 342 aa15.99■□□□□ 0.15
CLK1-205ENST00000434813 LIAT1Q6ZQX7 453 aa15.99■□□□□ 0.15
CLK1-205ENST00000434813 LINC00696Q6ZRV3 163 aa15.99■□□□□ 0.15
CLK1-205ENST00000434813 MRPL21Q7Z2W9 205 aaKnown RBP15.99■□□□□ 0.15
CLK1-205ENST00000434813 C18orf12Q96KH6 178 aa15.99■□□□□ 0.15
CLK1-205ENST00000434813 RSRP1Q9BUV0 290 aa15.99■□□□□ 0.15
CLK1-205ENST00000434813 NKX6-2Q9C056 277 aaPredicted RBP15.99■□□□□ 0.15
CLK1-205ENST00000434813 FGF23Q9GZV9 251 aaPredicted RBP15.99■□□□□ 0.15
CLK1-205ENST00000434813 PLA2G3Q9NZ20 509 aa15.99■□□□□ 0.15
CLK1-205ENST00000434813 OTOGLQ3ZCN5 2332 aa15.99■□□□□ 0.15
CLK1-205ENST00000434813 TNRC6AQ8NDV7 1962 aaKnown RBP15.99■□□□□ 0.15
CLK1-205ENST00000434813 H7C1Q1 480 aa15.99■□□□□ 0.15
CLK1-205ENST00000434813 ABCD4O14678 606 aa15.99■□□□□ 0.15
CLK1-205ENST00000434813 CCNOP22674 350 aa15.99■□□□□ 0.15
CLK1-205ENST00000434813 HERV-K104P61576 105 aa15.99■□□□□ 0.15
CLK1-205ENST00000434813 PLGLB1Q02325 96 aa15.99■□□□□ 0.15
CLK1-205ENST00000434813 PHLDA2Q53GA4 152 aa15.99■□□□□ 0.15
CLK1-205ENST00000434813 ZDHHC23Q8IYP9 409 aa15.99■□□□□ 0.15
CLK1-205ENST00000434813 SYT3Q9BQG1 590 aa15.99■□□□□ 0.15
CLK1-205ENST00000434813 PLEKHA2Q9HB19 425 aa15.99■□□□□ 0.15
CLK1-205ENST00000434813 FBXL17Q9UF56 701 aa15.99■□□□□ 0.15
CLK1-205ENST00000434813 AMDHD2Q9Y303 409 aa15.99■□□□□ 0.15
CLK1-205ENST00000434813 LSM5Q9Y4Y9 91 aaKnown RBP15.99■□□□□ 0.15
CLK1-205ENST00000434813 PRSS44E7EML9 344 aa15.98■□□□□ 0.15
CLK1-205ENST00000434813 TPD52L2O43399 206 aaKnown RBP15.98■□□□□ 0.15
CLK1-205ENST00000434813 ADCYAP1P18509 176 aa15.98■□□□□ 0.15
CLK1-205ENST00000434813 BCL3P20749 454 aa15.98■□□□□ 0.15
CLK1-205ENST00000434813 FGF12P61328 243 aa15.98■□□□□ 0.15
CLK1-205ENST00000434813 RNPS1Q15287 305 aaKnown RBP15.98■□□□□ 0.15
CLK1-205ENST00000434813 SRSF7Q16629 238 aaKnown RBP eCLIP15.98■□□□□ 0.15
CLK1-205ENST00000434813 CEACAM21Q3KPI0 293 aa15.98■□□□□ 0.15
CLK1-205ENST00000434813 CCDC71LQ8N9Z2 235 aa15.98■□□□□ 0.15
CLK1-205ENST00000434813 OR4A4PQ8NGN8 299 aa15.98■□□□□ 0.15
CLK1-205ENST00000434813 EXTL1Q92935 676 aa15.98■□□□□ 0.15
CLK1-205ENST00000434813 MSI2Q96DH6 328 aaKnown RBP15.98■□□□□ 0.15
CLK1-205ENST00000434813 PRRG4Q9BZD6 226 aa15.98■□□□□ 0.15
CLK1-205ENST00000434813 CRIM1Q9NZV1 1036 aa15.98■□□□□ 0.15
CLK1-205ENST00000434813 EP300Q09472 2414 aaPredicted RBP15.98■□□□□ 0.15
CLK1-205ENST00000434813 PCNX2A6NKB5 2137 aa15.98■□□□□ 0.15
CLK1-205ENST00000434813 KNTC1P50748 2209 aa15.98■□□□□ 0.15
CLK1-205ENST00000434813 SPAARA0A1B0GVQ0 90 aa15.97■□□□□ 0.15
CLK1-205ENST00000434813 NUPL2O15504 423 aaKnown RBP15.97■□□□□ 0.15
CLK1-205ENST00000434813 PPYP01298 95 aa15.97■□□□□ 0.15
CLK1-205ENST00000434813 MBPP02686 304 aaPredicted RBP15.97■□□□□ 0.15
CLK1-205ENST00000434813 CCL2P13500 99 aa15.97■□□□□ 0.15
CLK1-205ENST00000434813 RCC1P18754 421 aaPredicted RBP15.97■□□□□ 0.15
CLK1-205ENST00000434813 AADACP22760 399 aa15.97■□□□□ 0.15
CLK1-205ENST00000434813 ARR3P36575 388 aa15.97■□□□□ 0.15
CLK1-205ENST00000434813 PJVKQ0ZLH3 352 aa15.97■□□□□ 0.15
CLK1-205ENST00000434813 LGI3Q8N145 548 aa15.97■□□□□ 0.15
CLK1-205ENST00000434813 OR5L1Q8NGL2 311 aa15.97■□□□□ 0.15
CLK1-205ENST00000434813 SLAMF9Q96A28 289 aa15.97■□□□□ 0.15
CLK1-205ENST00000434813 IP6K3Q96PC2 410 aa15.97■□□□□ 0.15
CLK1-205ENST00000434813 OPA3Q9H6K4 179 aa15.97■□□□□ 0.15
CLK1-205ENST00000434813 PLSCR2Q9NRY7 297 aa15.97■□□□□ 0.15
CLK1-205ENST00000434813 RCC2Q9P258 522 aaKnown RBP15.97■□□□□ 0.15
CLK1-205ENST00000434813 E5RGE8 158 aa15.97■□□□□ 0.15
CLK1-205ENST00000434813 NME2P1O60361 137 aa15.97■□□□□ 0.15
CLK1-205ENST00000434813 JTBO76095 146 aa15.97■□□□□ 0.15
CLK1-205ENST00000434813 SCGB1D2O95969 90 aa15.97■□□□□ 0.15
CLK1-205ENST00000434813 NME2P22392 152 aa15.97■□□□□ 0.15
CLK1-205ENST00000434813 HAAOP46952 286 aa15.97■□□□□ 0.15
CLK1-205ENST00000434813 GPM6AP51674 278 aa15.97■□□□□ 0.15
CLK1-205ENST00000434813 C10orf91Q5T1B1 145 aa15.97■□□□□ 0.15
CLK1-205ENST00000434813 ASCL5Q7RTU5 278 aa15.97■□□□□ 0.15
CLK1-205ENST00000434813 LYZL2Q7Z4W2 148 aa15.97■□□□□ 0.15
CLK1-205ENST00000434813 MDS2Q8NDY4 140 aa15.97■□□□□ 0.15
CLK1-205ENST00000434813 GLYATL2Q8WU03 294 aa15.97■□□□□ 0.15
CLK1-205ENST00000434813 POM121L2Q96KW2 1035 aa15.97■□□□□ 0.15
CLK1-205ENST00000434813 TSNAXQ99598 290 aaKnown RBP15.97■□□□□ 0.15
CLK1-205ENST00000434813 ZFP57Q9NU63 452 aa15.97■□□□□ 0.15
CLK1-205ENST00000434813 ZNF629Q9UEG4 869 aaPredicted RBP15.97■□□□□ 0.15
CLK1-205ENST00000434813 KLF13Q9Y2Y9 288 aaPredicted RBP15.97■□□□□ 0.15
CLK1-205ENST00000434813 NSG2Q9Y328 171 aa15.97■□□□□ 0.15
CLK1-205ENST00000434813 AHCTF1Q8WYP5 2266 aa15.96■□□□□ 0.15
CLK1-205ENST00000434813 SP1P08047 785 aa15.96■□□□□ 0.15
CLK1-205ENST00000434813 MEOX1P50221 254 aa15.96■□□□□ 0.15
CLK1-205ENST00000434813 SULT1A2P50226 295 aa15.96■□□□□ 0.15
CLK1-205ENST00000434813 AKR1C2P52895 323 aa15.96■□□□□ 0.15
CLK1-205ENST00000434813 TMEM33P57088 247 aa15.96■□□□□ 0.15
CLK1-205ENST00000434813 AKR1C1Q04828 323 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms