RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 RAB2AP61019 212 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 STXBP1P61764 594 aaKnown RBP1.93□□□□□ -2.1
CLK1-204ENST00000432425 RELAQ04206 551 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 RIPPLY1Q0D2K3 151 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 PPP1R1AQ13522 171 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 SURF2Q15527 256 aaPredicted RBP1.93□□□□□ -2.1
CLK1-204ENST00000432425 SMIM21Q3B7S5 101 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 VAX1Q5SQQ9 334 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 CPTPQ5TA50 214 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 KCTD16Q68DU8 428 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 LPCAT3Q6P1A2 487 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 PEX26Q7Z412 305 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 MRPL52Q86TS9 123 aaKnown RBP1.93□□□□□ -2.1
CLK1-204ENST00000432425 PIANPQ8IYJ0 282 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 CPNE9Q8IYJ1 553 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 MTURNQ8N3F0 131 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 ZNF676Q8N7Q3 588 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 C15orf54Q8N8G6 183 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 GPR32P1Q8NGA4 272 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 OR10G9Q8NGN4 311 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 OR5AR1Q8NGP9 310 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 OR1P1Q8NH06 330 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 ZNF502Q8TBZ5 544 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 AENQ8WTP8 325 aaKnown RBP1.93□□□□□ -2.1
CLK1-204ENST00000432425 FAM151AQ8WW52 585 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 UFD1Q92890 307 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 DNAJC19Q96DA6 116 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 FOPNLQ96NB1 174 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 RBP7Q96R05 134 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 MCHR1Q99705 422 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 SIGMAR1Q99720 223 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 VPS25Q9BRG1 176 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 RNF126Q9BV68 326 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 NAT10Q9H0A0 1025 aaKnown RBP1.93□□□□□ -2.1
CLK1-204ENST00000432425 OR51I1Q9H343 314 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 BOLA2Q9H3K6 86 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 NHEJ1Q9H9Q4 299 aaPredicted RBP1.93□□□□□ -2.1
CLK1-204ENST00000432425 ACOT13Q9NPJ3 140 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 FAIMQ9NVQ4 179 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 SAR1BQ9Y6B6 198 aa1.93□□□□□ -2.1
CLK1-204ENST00000432425 C2orf16Q68DN1 1984 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 MYO5BQ9ULV0 1848 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 C9orf170A2RU37 121 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 VPS37CA5D8V6 355 aaPredicted RBP1.92□□□□□ -2.1
CLK1-204ENST00000432425 EVPLLA8MZ36 301 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 TRDCB7Z8K6 153 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 K7EP13 123 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 BHLHE40O14503 412 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 CDC40O60508 579 aaKnown RBP eCLIP1.92□□□□□ -2.1
CLK1-204ENST00000432425 CCDC22O60826 627 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 DCTN3O75935 186 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 GCGP01275 180 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 RLN2P04090 185 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 SERPINA7P05543 415 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 GIPP09681 153 aaPredicted RBP1.92□□□□□ -2.1
CLK1-204ENST00000432425 OR10J4P0C629 311 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 SMIM6P0DI80 62 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 ZNF823P16415 610 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 IGFBP3P17936 291 aaPredicted RBP1.92□□□□□ -2.1
CLK1-204ENST00000432425 TBPP20226 339 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 COX7A1P24310 79 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 ERP29P30040 261 aaKnown RBP1.92□□□□□ -2.1
CLK1-204ENST00000432425 PYCR1P32322 319 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 RCVRNP35243 200 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 REG1BP48304 166 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 AKR1D1P51857 326 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 DNAJB13P59910 316 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 BTN3A2P78410 334 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 TGFBR3Q03167 851 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 CD164Q04900 197 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 OR2F1Q13607 317 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 TFDP2Q14188 446 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 HLA-DRB5Q30154 266 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 TTLL9Q3SXZ7 439 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 C9orf64Q5T6V5 341 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 FBXW9Q5XUX1 488 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 XKRXQ6PP77 449 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 TMEM205Q6UW68 189 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 SPNS3Q6ZMD2 512 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 GLT6D1Q7Z4J2 308 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 FAM19A5Q7Z5A7 132 aaPredicted RBP1.92□□□□□ -2.1
CLK1-204ENST00000432425 NIT1Q86X76 327 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 ANGPTL5Q86XS5 388 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 CBLN2Q8IUK8 224 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 ZBTB8OSQ8IWT0 167 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 SLC30A8Q8IWU4 369 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 SAXO1Q8IYX7 474 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 VKORC1L1Q8N0U8 176 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 OR2M7Q8NG81 312 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 OR51S1Q8NGJ8 323 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 OR51G1Q8NGK1 321 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 OR4C13Q8NGP0 309 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 FAM45AQ8TCE6 357 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 SPPL2BQ8TCT7 592 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 Q8WTZ3 238 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 ASB17Q8WXJ9 295 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 C12orf43Q96C57 262 aaKnown RBP1.92□□□□□ -2.1
CLK1-204ENST00000432425 CMTM7Q96FZ5 175 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 MED8Q96G25 268 aa1.92□□□□□ -2.1
CLK1-204ENST00000432425 C14orf144Q96I85 54 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms