RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 BSNQ9UPA5 3926 aa8.88□□□□□ -0.99
HDAC9-210ENST00000428307 MBD3L4A6NDZ8 208 aaPredicted RBP8.88□□□□□ -0.99
HDAC9-210ENST00000428307 MBD3L3A6NE82 208 aaPredicted RBP8.88□□□□□ -0.99
HDAC9-210ENST00000428307 MBD3L5A6NJ08 208 aaPredicted RBP8.88□□□□□ -0.99
HDAC9-210ENST00000428307 H0YL77 283 aa8.88□□□□□ -0.99
HDAC9-210ENST00000428307 ERVH48-1M5A8F1 160 aa8.88□□□□□ -0.99
HDAC9-210ENST00000428307 CDIPTO14735 213 aa8.88□□□□□ -0.99
HDAC9-210ENST00000428307 HLA-GP17693 338 aa8.88□□□□□ -0.99
HDAC9-210ENST00000428307 S100A11P31949 105 aa8.88□□□□□ -0.99
HDAC9-210ENST00000428307 FABP6P51161 128 aa8.88□□□□□ -0.99
HDAC9-210ENST00000428307 IGSF11Q5DX21 431 aa8.88□□□□□ -0.99
HDAC9-210ENST00000428307 TMEM211Q6ICI0 200 aa8.88□□□□□ -0.99
HDAC9-210ENST00000428307 LPCAT3Q6P1A2 487 aa8.88□□□□□ -0.99
HDAC9-210ENST00000428307 TMUB2Q71RG4 321 aa8.88□□□□□ -0.99
HDAC9-210ENST00000428307 WDR86Q86TI4 376 aa8.88□□□□□ -0.99
HDAC9-210ENST00000428307 MBD3L2Q8NHZ7 208 aaPredicted RBP8.88□□□□□ -0.99
HDAC9-210ENST00000428307 RDH8Q9NYR8 311 aa8.88□□□□□ -0.99
HDAC9-210ENST00000428307 DBX1A6NMT0 343 aa8.87□□□□□ -0.99
HDAC9-210ENST00000428307 KCNAB3O43448 404 aa8.87□□□□□ -0.99
HDAC9-210ENST00000428307 CD8AP01732 235 aa8.87□□□□□ -0.99
HDAC9-210ENST00000428307 CRYABP02511 175 aaKnown RBP8.87□□□□□ -0.99
HDAC9-210ENST00000428307 GRPP07492 148 aa8.87□□□□□ -0.99
HDAC9-210ENST00000428307 CECR9P0C854 216 aa8.87□□□□□ -0.99
HDAC9-210ENST00000428307 GLI4P10075 376 aa8.87□□□□□ -0.99
HDAC9-210ENST00000428307 RAC2P15153 192 aa8.87□□□□□ -0.99
HDAC9-210ENST00000428307 RPS2P15880 293 aaKnown RBP8.87□□□□□ -0.99
HDAC9-210ENST00000428307 S100A1P23297 94 aa8.87□□□□□ -0.99
HDAC9-210ENST00000428307 DHRS11Q6UWP2 260 aa8.87□□□□□ -0.99
HDAC9-210ENST00000428307 FAM219AQ8IW50 185 aa8.87□□□□□ -0.99
HDAC9-210ENST00000428307 SPACA3Q8IXA5 215 aa8.87□□□□□ -0.99
HDAC9-210ENST00000428307 FAM58AQ8N1B3 248 aa8.87□□□□□ -0.99
HDAC9-210ENST00000428307 CITED4Q96RK1 184 aa8.87□□□□□ -0.99
HDAC9-210ENST00000428307 RTL8AQ9BWD3 113 aa8.87□□□□□ -0.99
HDAC9-210ENST00000428307 METTL8Q9H825 291 aaKnown RBP8.87□□□□□ -0.99
HDAC9-210ENST00000428307 OBP2BQ9NPH6 170 aa8.87□□□□□ -0.99
HDAC9-210ENST00000428307 TINAGQ9UJW2 476 aa8.87□□□□□ -0.99
HDAC9-210ENST00000428307 SHANK1Q9Y566 2161 aa8.87□□□□□ -0.99
HDAC9-210ENST00000428307 TEX13DA0A0J9YY54 714 aaPredicted RBP8.87□□□□□ -0.99
HDAC9-210ENST00000428307 J3QW42 95 aa8.87□□□□□ -0.99
HDAC9-210ENST00000428307 HOXB1P14653 301 aaPredicted RBP8.87□□□□□ -0.99
HDAC9-210ENST00000428307 C4BPBP20851 252 aa8.87□□□□□ -0.99
HDAC9-210ENST00000428307 FGL1Q08830 312 aa8.87□□□□□ -0.99
HDAC9-210ENST00000428307 IL24Q13007 206 aa8.87□□□□□ -0.99
HDAC9-210ENST00000428307 P2RY6Q15077 328 aa8.87□□□□□ -0.99
HDAC9-210ENST00000428307 SURF2Q15527 256 aaPredicted RBP8.87□□□□□ -0.99
HDAC9-210ENST00000428307 BEX5Q5H9J7 111 aa8.87□□□□□ -0.99
HDAC9-210ENST00000428307 GSG1LQ6UXU4 331 aa8.87□□□□□ -0.99
HDAC9-210ENST00000428307 BHLHA15Q7RTS1 189 aaPredicted RBP8.87□□□□□ -0.99
HDAC9-210ENST00000428307 SCCPDHQ8NBX0 429 aa8.87□□□□□ -0.99
HDAC9-210ENST00000428307 C1orf162Q8NEQ5 155 aaPredicted RBP8.87□□□□□ -0.99
HDAC9-210ENST00000428307 OR5T2Q8NGG2 359 aa8.87□□□□□ -0.99
HDAC9-210ENST00000428307 ASB13Q8WXK3 278 aa8.87□□□□□ -0.99
HDAC9-210ENST00000428307 ADAT1Q9BUB4 502 aaKnown RBP8.87□□□□□ -0.99
HDAC9-210ENST00000428307 TP53TG5Q9Y2B4 290 aa8.87□□□□□ -0.99
HDAC9-210ENST00000428307 FAM90A10PA6NDY2 464 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 FAM90A18PA6NE21 464 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 FAM90A16PA6NEW6 464 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 FAM90A20PA6NIJ5 464 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 FAM90A8PA6NJQ4 464 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 FAM90A7PA6NKC0 464 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 OR5H1A6NKK0 313 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 FAM90A22PA8MWA6 464 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 FAM90A12PA8MX19 464 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 FAM90A5PA8MXJ8 464 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 FAM90A23PA8MXZ1 464 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 BET1O15155 118 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 IFNA7P01567 189 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 HOXB5P09067 269 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 FAM90A15PP0C7V4 464 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 FAM90A13PP0C7W8 464 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 FAM90A14PP0C7W9 464 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 FAM90A24PP0C7X0 464 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 ZNF728P0DKX0 622 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 PIGPP57054 158 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 ZNF154Q13106 437 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 PHLDA2Q53GA4 152 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 NHLRC3Q5JS37 347 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 C11orf87Q6NUJ2 197 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 ZNF474Q6S9Z5 364 aaPredicted RBP8.86□□□□□ -0.99
HDAC9-210ENST00000428307 FAM180AQ6UWF9 173 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 BEND4Q6ZU67 534 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 SUMF2Q8NBJ7 301 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 COQ8AQ8NI60 647 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 IFNA2P01563 188 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 SCTP09683 121 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 ZNF44P15621 663 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 RBMXP38159 391 aaKnown RBP8.86□□□□□ -0.99
HDAC9-210ENST00000428307 HOXA4Q00056 320 aaPredicted RBP8.86□□□□□ -0.99
HDAC9-210ENST00000428307 SRSF4Q08170 494 aaKnown RBP8.86□□□□□ -0.99
HDAC9-210ENST00000428307 OR8G1Q15617 311 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 MPV17LQ2QL34 196 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 SP6Q3SY56 376 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 FAM76BQ5HYJ3 339 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 SGPP2Q8IWX5 399 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 CISD2Q8N5K1 135 aaKnown RBP8.86□□□□□ -0.99
HDAC9-210ENST00000428307 GSKIPQ9P0R6 139 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 RCC2Q9P258 522 aaKnown RBP8.86□□□□□ -0.99
HDAC9-210ENST00000428307 UBQLN2Q9UHD9 624 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 MAB21L2Q9Y586 359 aa8.86□□□□□ -0.99
HDAC9-210ENST00000428307 NBEAQ8NFP9 2946 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms