RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 ASCL2Q99929 193 aa10.19□□□□□ -0.78
LINC00339-203ENST00000420503 DNAJB9Q9UBS3 223 aa10.19□□□□□ -0.78
LINC00339-203ENST00000420503 PSMB11A5LHX3 300 aa10.18□□□□□ -0.78
LINC00339-203ENST00000420503 LINC01548A6NM66 108 aa10.18□□□□□ -0.78
LINC00339-203ENST00000420503 H0YHG0 523 aa10.18□□□□□ -0.78
LINC00339-203ENST00000420503 LY6LH3BQJ8 138 aa10.18□□□□□ -0.78
LINC00339-203ENST00000420503 GNGT2O14610 69 aa10.18□□□□□ -0.78
LINC00339-203ENST00000420503 PRKACAP17612 351 aa10.18□□□□□ -0.78
LINC00339-203ENST00000420503 PEX2P28328 305 aa10.18□□□□□ -0.78
LINC00339-203ENST00000420503 OR3A4PP47883 348 aa10.18□□□□□ -0.78
LINC00339-203ENST00000420503 CRISP1P54107 249 aa10.18□□□□□ -0.78
LINC00339-203ENST00000420503 BDH1Q02338 343 aa10.18□□□□□ -0.78
LINC00339-203ENST00000420503 AESQ08117 197 aa10.18□□□□□ -0.78
LINC00339-203ENST00000420503 RBM39Q14498 530 aaKnown RBP10.18□□□□□ -0.78
LINC00339-203ENST00000420503 KPNB1Q14974 876 aaKnown RBP10.18□□□□□ -0.78
LINC00339-203ENST00000420503 TPTE2P1Q5T6R2 138 aa10.18□□□□□ -0.78
LINC00339-203ENST00000420503 LCN1P1Q5VSP4 162 aa10.18□□□□□ -0.78
LINC00339-203ENST00000420503 CATSPERDQ86XM0 798 aa10.18□□□□□ -0.78
LINC00339-203ENST00000420503 PRSS35Q8N3Z0 413 aa10.18□□□□□ -0.78
LINC00339-203ENST00000420503 LEAP2Q969E1 77 aa10.18□□□□□ -0.78
LINC00339-203ENST00000420503 RNF166Q96A37 237 aaPredicted RBP10.18□□□□□ -0.78
LINC00339-203ENST00000420503 ADAT3Q96EY9 351 aaPredicted RBP10.18□□□□□ -0.78
LINC00339-203ENST00000420503 CHST5Q9GZS9 411 aa10.18□□□□□ -0.78
LINC00339-203ENST00000420503 MOB1AQ9H8S9 216 aa10.18□□□□□ -0.78
LINC00339-203ENST00000420503 SNX5Q9Y5X3 404 aa10.18□□□□□ -0.78
LINC00339-203ENST00000420503 E9PQ18 207 aa10.17□□□□□ -0.78
LINC00339-203ENST00000420503 SYT7O43581 403 aa10.17□□□□□ -0.78
LINC00339-203ENST00000420503 DUS4LO95620 317 aaKnown RBP10.17□□□□□ -0.78
LINC00339-203ENST00000420503 OR2H2O95918 312 aa10.17□□□□□ -0.78
LINC00339-203ENST00000420503 KIR3DL2P43630 455 aa10.17□□□□□ -0.78
LINC00339-203ENST00000420503 DAPP51397 102 aa10.17□□□□□ -0.78
LINC00339-203ENST00000420503 IL18R1Q13478 541 aa10.17□□□□□ -0.78
LINC00339-203ENST00000420503 PTGES3Q15185 160 aaKnown RBP10.17□□□□□ -0.78
LINC00339-203ENST00000420503 ZSCAN26Q16670 478 aa10.17□□□□□ -0.78
LINC00339-203ENST00000420503 HLA-DRB5Q30154 266 aa10.17□□□□□ -0.78
LINC00339-203ENST00000420503 DEFB136Q30KP8 78 aa10.17□□□□□ -0.78
LINC00339-203ENST00000420503 AADACL4Q5VUY2 407 aa10.17□□□□□ -0.78
LINC00339-203ENST00000420503 MEPCEQ7L2J0 689 aaKnown RBP10.17□□□□□ -0.78
LINC00339-203ENST00000420503 C16orf82Q7Z2V1 217 aa10.17□□□□□ -0.78
LINC00339-203ENST00000420503 FAM58AQ8N1B3 248 aa10.17□□□□□ -0.78
LINC00339-203ENST00000420503 TCEANCQ8N8B7 351 aa10.17□□□□□ -0.78
LINC00339-203ENST00000420503 YIPF7Q8N8F6 280 aa10.17□□□□□ -0.78
LINC00339-203ENST00000420503 KLHL30-AS1Q8NEE0 82 aa10.17□□□□□ -0.78
LINC00339-203ENST00000420503 OR56B4Q8NH76 319 aa10.17□□□□□ -0.78
LINC00339-203ENST00000420503 CAPSLQ8WWF8 208 aa10.17□□□□□ -0.78
LINC00339-203ENST00000420503 COQ2Q96H96 371 aa10.17□□□□□ -0.78
LINC00339-203ENST00000420503 SPACA5Q96QH8 159 aa10.17□□□□□ -0.78
LINC00339-203ENST00000420503 IL4I1Q96RQ9 567 aa10.17□□□□□ -0.78
LINC00339-203ENST00000420503 P2RX4Q99571 388 aa10.17□□□□□ -0.78
LINC00339-203ENST00000420503 PPIL3Q9H2H8 161 aaKnown RBP10.17□□□□□ -0.78
LINC00339-203ENST00000420503 PLEKHA1Q9HB21 404 aa10.17□□□□□ -0.78
LINC00339-203ENST00000420503 SLC7A11Q9UPY5 501 aa10.17□□□□□ -0.78
LINC00339-203ENST00000420503 GSTK1Q9Y2Q3 226 aa10.17□□□□□ -0.78
LINC00339-203ENST00000420503 AP4S1Q9Y587 144 aa10.17□□□□□ -0.78
LINC00339-203ENST00000420503 TMEM14AQ9Y6G1 99 aa10.17□□□□□ -0.78
LINC00339-203ENST00000420503 TRBV2A0A0J9YWF9 115 aa10.16□□□□□ -0.78
LINC00339-203ENST00000420503 LOC107986453A0A1B0GWG9 222 aa10.16□□□□□ -0.78
LINC00339-203ENST00000420503 A0A1W2PQL4 384 aaPredicted RBP10.16□□□□□ -0.78
LINC00339-203ENST00000420503 ZNF670-ZNF695F2Z2N8 137 aa10.16□□□□□ -0.78
LINC00339-203ENST00000420503 H3BNX3 289 aa10.16□□□□□ -0.78
LINC00339-203ENST00000420503 BUB1B-PAK6H3BSN5 160 aa10.16□□□□□ -0.78
LINC00339-203ENST00000420503 MGST3O14880 152 aa10.16□□□□□ -0.78
LINC00339-203ENST00000420503 CLIC3O95833 236 aa10.16□□□□□ -0.78
LINC00339-203ENST00000420503 BRS3P32247 399 aa10.16□□□□□ -0.78
LINC00339-203ENST00000420503 HNF4GQ14541 408 aa10.16□□□□□ -0.78
LINC00339-203ENST00000420503 ATP6AP1Q15904 470 aa10.16□□□□□ -0.78
LINC00339-203ENST00000420503 C17orf58Q2M2W7 97 aa10.16□□□□□ -0.78
LINC00339-203ENST00000420503 HEPN1Q6WQI6 88 aa10.16□□□□□ -0.78
LINC00339-203ENST00000420503 OR5D18Q8NGL1 313 aa10.16□□□□□ -0.78
LINC00339-203ENST00000420503 OR10AC1Q8NH08 325 aa10.16□□□□□ -0.78
LINC00339-203ENST00000420503 BORCS8Q96FH0 119 aa10.16□□□□□ -0.78
LINC00339-203ENST00000420503 RAX2Q96IS3 184 aa10.16□□□□□ -0.78
LINC00339-203ENST00000420503 ZNF556Q9HAH1 456 aa10.16□□□□□ -0.78
LINC00339-203ENST00000420503 PAPOLBQ9NRJ5 636 aaKnown RBP10.16□□□□□ -0.78
LINC00339-203ENST00000420503 CLN6Q9NWW5 311 aa10.16□□□□□ -0.78
LINC00339-203ENST00000420503 UBE2J1Q9Y385 318 aaPredicted RBP10.16□□□□□ -0.78
LINC00339-203ENST00000420503 U3KQK5 164 aa10.16□□□□□ -0.78
LINC00339-203ENST00000420503 A0A1W2PPI3 338 aa10.15□□□□□ -0.78
LINC00339-203ENST00000420503 DHRS7CA6NNS2 312 aa10.15□□□□□ -0.78
LINC00339-203ENST00000420503 NUDT19A8MXV4 375 aa10.15□□□□□ -0.78
LINC00339-203ENST00000420503 LEUTXA8MZ59 168 aa10.15□□□□□ -0.78
LINC00339-203ENST00000420503 ANXA8P13928 327 aa10.15□□□□□ -0.78
LINC00339-203ENST00000420503 NFYBP25208 207 aa10.15□□□□□ -0.78
LINC00339-203ENST00000420503 FUT6P51993 359 aa10.15□□□□□ -0.78
LINC00339-203ENST00000420503 RAB25P57735 213 aa10.15□□□□□ -0.78
LINC00339-203ENST00000420503 EFNB1P98172 346 aa10.15□□□□□ -0.78
LINC00339-203ENST00000420503 ATXN7L3Q14CW9 347 aaPredicted RBP10.15□□□□□ -0.78
LINC00339-203ENST00000420503 ZNF146Q15072 292 aa10.15□□□□□ -0.78
LINC00339-203ENST00000420503 SLX4IPQ5VYV7 408 aa10.15□□□□□ -0.78
LINC00339-203ENST00000420503 FAHD1Q6P587 224 aa10.15□□□□□ -0.78
LINC00339-203ENST00000420503 DRAM1Q8N682 238 aa10.15□□□□□ -0.78
LINC00339-203ENST00000420503 ZNF596Q8TC21 504 aa10.15□□□□□ -0.78
LINC00339-203ENST00000420503 PYDC1Q8WXC3 89 aa10.15□□□□□ -0.78
LINC00339-203ENST00000420503 DPF1Q92782 380 aa10.15□□□□□ -0.78
LINC00339-203ENST00000420503 ITFG2Q969R8 447 aa10.15□□□□□ -0.78
LINC00339-203ENST00000420503 NRBF2Q96F24 287 aa10.15□□□□□ -0.78
LINC00339-203ENST00000420503 AKR1E2Q96JD6 320 aa10.15□□□□□ -0.78
LINC00339-203ENST00000420503 HMG20AQ9NP66 347 aa10.15□□□□□ -0.78
LINC00339-203ENST00000420503 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.15□□□□□ -0.78
LINC00339-203ENST00000420503 MOB4Q9Y3A3 225 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms