RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 TMEM210A6NLX4 147 aa17.79■□□□□ 0.44
GPC1-202ENST00000420138 PRSS44E7EML9 344 aa17.79■□□□□ 0.44
GPC1-202ENST00000420138 PMELP40967 661 aa17.79■□□□□ 0.44
GPC1-202ENST00000420138 ZMYND11Q15326 602 aa17.79■□□□□ 0.44
GPC1-202ENST00000420138 Q6ZPA2 131 aa17.79■□□□□ 0.44
GPC1-202ENST00000420138 CHIAQ9BZP6 476 aa17.79■□□□□ 0.44
GPC1-202ENST00000420138 CHST6Q9GZX3 395 aa17.79■□□□□ 0.44
GPC1-202ENST00000420138 CA10Q9NS85 328 aa17.79■□□□□ 0.44
GPC1-202ENST00000420138 PIPOXQ9P0Z9 390 aa17.79■□□□□ 0.44
GPC1-202ENST00000420138 PLEKHA6Q9Y2H5 1048 aa17.79■□□□□ 0.44
GPC1-202ENST00000420138 IGHV3-64DA0A0J9YX35 117 aa17.79■□□□□ 0.44
GPC1-202ENST00000420138 F5H5P2 479 aa17.79■□□□□ 0.44
GPC1-202ENST00000420138 CDIPTO14735 213 aa17.79■□□□□ 0.44
GPC1-202ENST00000420138 OR2A4O95047 310 aa17.79■□□□□ 0.44
GPC1-202ENST00000420138 PRKACAP17612 351 aa17.79■□□□□ 0.44
GPC1-202ENST00000420138 RAP2BP61225 183 aa17.79■□□□□ 0.44
GPC1-202ENST00000420138 OR2A7Q96R45 310 aa17.79■□□□□ 0.44
GPC1-202ENST00000420138 SPEF1Q9Y4P9 236 aa17.79■□□□□ 0.44
GPC1-202ENST00000420138 IGHV3-13P01766 116 aa17.78■□□□□ 0.44
GPC1-202ENST00000420138 AMY2BP19961 511 aa17.78■□□□□ 0.44
GPC1-202ENST00000420138 S100A1P23297 94 aa17.78■□□□□ 0.44
GPC1-202ENST00000420138 DUSP1P28562 367 aa17.78■□□□□ 0.44
GPC1-202ENST00000420138 MPV17LQ2QL34 196 aa17.78■□□□□ 0.44
GPC1-202ENST00000420138 SCGB2B2Q4G0G5 96 aa17.78■□□□□ 0.44
GPC1-202ENST00000420138 C4orf46Q504U0 113 aa17.78■□□□□ 0.44
GPC1-202ENST00000420138 FAM58AQ8N1B3 248 aa17.78■□□□□ 0.44
GPC1-202ENST00000420138 MUC20Q8N307 709 aaPredicted RBP17.78■□□□□ 0.44
GPC1-202ENST00000420138 GTF3AQ92664 365 aaKnown RBP17.78■□□□□ 0.44
GPC1-202ENST00000420138 CMSS1Q9BQ75 279 aaKnown RBP17.78■□□□□ 0.44
GPC1-202ENST00000420138 NRIP2Q9BQI9 281 aa17.78■□□□□ 0.44
GPC1-202ENST00000420138 TLNRD1Q9H1K6 362 aa17.78■□□□□ 0.44
GPC1-202ENST00000420138 CXXC4Q9H2H0 198 aa17.78■□□□□ 0.44
GPC1-202ENST00000420138 RHOFQ9HBH0 211 aa17.78■□□□□ 0.44
GPC1-202ENST00000420138 KALRNO60229 2985 aa17.78■□□□□ 0.44
GPC1-202ENST00000420138 IGLV3-9A0A075B6K5 115 aa17.77■□□□□ 0.44
GPC1-202ENST00000420138 DPRXA6NFQ7 191 aa17.77■□□□□ 0.44
GPC1-202ENST00000420138 G3V3Q6 166 aa17.77■□□□□ 0.44
GPC1-202ENST00000420138 GRPP07492 148 aa17.77■□□□□ 0.44
GPC1-202ENST00000420138 FCGR3AP08637 254 aa17.77■□□□□ 0.44
GPC1-202ENST00000420138 PGA5P0DJD9 388 aa17.77■□□□□ 0.44
GPC1-202ENST00000420138 DTYMKP23919 212 aa17.77■□□□□ 0.44
GPC1-202ENST00000420138 ACTBL2Q562R1 376 aa17.77■□□□□ 0.44
GPC1-202ENST00000420138 ZNF767PQ75MW2 155 aa17.77■□□□□ 0.44
GPC1-202ENST00000420138 WFDC8Q8IUA0 241 aa17.77■□□□□ 0.44
GPC1-202ENST00000420138 OR13G1Q8NGZ3 307 aa17.77■□□□□ 0.44
GPC1-202ENST00000420138 LILRB4Q8NHJ6 448 aa17.77■□□□□ 0.44
GPC1-202ENST00000420138 PLK3Q9H4B4 646 aa17.77■□□□□ 0.44
GPC1-202ENST00000420138 DUSP13Q9UII6 198 aa17.77■□□□□ 0.44
GPC1-202ENST00000420138 OR2AT4A6NND4 320 aa17.77■□□□□ 0.43
GPC1-202ENST00000420138 ACAA1P09110 424 aaPredicted RBP17.77■□□□□ 0.43
GPC1-202ENST00000420138 OR4E1P0C645 316 aa17.77■□□□□ 0.43
GPC1-202ENST00000420138 ATPAF1Q5TC12 328 aaPredicted RBP17.77■□□□□ 0.43
GPC1-202ENST00000420138 OR2AK2Q8NG84 335 aa17.77■□□□□ 0.43
GPC1-202ENST00000420138 FN3KRPQ9HA64 309 aa17.77■□□□□ 0.43
GPC1-202ENST00000420138 ZNF701Q9NV72 531 aaPredicted RBP17.77■□□□□ 0.43
GPC1-202ENST00000420138 COQ3Q9NZJ6 369 aa17.77■□□□□ 0.43
GPC1-202ENST00000420138 POLDIP2Q9Y2S7 368 aa17.77■□□□□ 0.43
GPC1-202ENST00000420138 IGSF10Q6WRI0 2623 aa17.76■□□□□ 0.43
GPC1-202ENST00000420138 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.76■□□□□ 0.43
GPC1-202ENST00000420138 IL13RA2Q14627 380 aa17.76■□□□□ 0.43
GPC1-202ENST00000420138 LGALSLQ3ZCW2 172 aaPredicted RBP17.76■□□□□ 0.43
GPC1-202ENST00000420138 TMEM108Q6UXF1 575 aa17.76■□□□□ 0.43
GPC1-202ENST00000420138 LINC00596Q86U02 117 aa17.76■□□□□ 0.43
GPC1-202ENST00000420138 SPERTQ8NA61 448 aa17.76■□□□□ 0.43
GPC1-202ENST00000420138 OR5AP2Q8NGF4 316 aa17.76■□□□□ 0.43
GPC1-202ENST00000420138 WFIKKN1Q96NZ8 548 aa17.76■□□□□ 0.43
GPC1-202ENST00000420138 EDARQ9UNE0 448 aa17.76■□□□□ 0.43
GPC1-202ENST00000420138 VSIG4Q9Y279 399 aa17.76■□□□□ 0.43
GPC1-202ENST00000420138 FAM221AA4D161 298 aa17.75■□□□□ 0.43
GPC1-202ENST00000420138 PTAFRP25105 342 aa17.75■□□□□ 0.43
GPC1-202ENST00000420138 CHRNB4P30926 498 aa17.75■□□□□ 0.43
GPC1-202ENST00000420138 ASCL1P50553 236 aa17.75■□□□□ 0.43
GPC1-202ENST00000420138 ADORA2A-AS1P86434 159 aa17.75■□□□□ 0.43
GPC1-202ENST00000420138 MPPED2Q15777 294 aa17.75■□□□□ 0.43
GPC1-202ENST00000420138 PRAMEF6Q5VXH4 476 aa17.75■□□□□ 0.43
GPC1-202ENST00000420138 VHLLQ6RSH7 139 aa17.75■□□□□ 0.43
GPC1-202ENST00000420138 OVCH2Q7RTZ1 564 aa17.75■□□□□ 0.43
GPC1-202ENST00000420138 TMED4Q7Z7H5 227 aa17.75■□□□□ 0.43
GPC1-202ENST00000420138 ARRDC1Q8N5I2 433 aa17.75■□□□□ 0.43
GPC1-202ENST00000420138 NUP37Q8NFH4 326 aa17.75■□□□□ 0.43
GPC1-202ENST00000420138 OR5H2Q8NGV7 314 aa17.75■□□□□ 0.43
GPC1-202ENST00000420138 SYT3Q9BQG1 590 aa17.75■□□□□ 0.43
GPC1-202ENST00000420138 ZNF442Q9H7R0 627 aa17.75■□□□□ 0.43
GPC1-202ENST00000420138 ESPL1Q14674 2120 aa17.75■□□□□ 0.43
GPC1-202ENST00000420138 HEATR1Q9H583 2144 aaKnown RBP17.75■□□□□ 0.43
GPC1-202ENST00000420138 ZSCAN5BA6NJL1 495 aa17.75■□□□□ 0.43
GPC1-202ENST00000420138 H3BUI4 141 aa17.75■□□□□ 0.43
GPC1-202ENST00000420138 NOS1APO75052 506 aaPredicted RBP17.75■□□□□ 0.43
GPC1-202ENST00000420138 TSC22D2O75157 780 aa17.75■□□□□ 0.43
GPC1-202ENST00000420138 KLF3P57682 345 aaPredicted RBP17.75■□□□□ 0.43
GPC1-202ENST00000420138 IKZF1Q13422 519 aa17.75■□□□□ 0.43
GPC1-202ENST00000420138 FBXL19-AS1Q494R0 122 aa17.75■□□□□ 0.43
GPC1-202ENST00000420138 Q6P435 159 aa17.75■□□□□ 0.43
GPC1-202ENST00000420138 ZNF826PQ6ZT77 177 aa17.75■□□□□ 0.43
GPC1-202ENST00000420138 SSX8Q7RTT4 187 aa17.75■□□□□ 0.43
GPC1-202ENST00000420138 ZDHHC22Q8N966 263 aa17.75■□□□□ 0.43
GPC1-202ENST00000420138 UXS1Q8NBZ7 420 aa17.75■□□□□ 0.43
GPC1-202ENST00000420138 PRR7Q8TB68 274 aa17.75■□□□□ 0.43
GPC1-202ENST00000420138 MRPL37Q9BZE1 423 aaKnown RBP17.75■□□□□ 0.43
GPC1-202ENST00000420138 IFT22Q9H7X7 185 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms