RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 WDR90Q96KV7 1748 aa9.37□□□□□ -0.91
COL12A1-203ENST00000416123 ZNF320A2RRD8 509 aa9.36□□□□□ -0.91
COL12A1-203ENST00000416123 C9orf170A2RU37 121 aa9.36□□□□□ -0.91
COL12A1-203ENST00000416123 MPGP29372 298 aa9.36□□□□□ -0.91
COL12A1-203ENST00000416123 ZNF528Q3MIS6 628 aa9.36□□□□□ -0.91
COL12A1-203ENST00000416123 C11orf87Q6NUJ2 197 aa9.36□□□□□ -0.91
COL12A1-203ENST00000416123 TGIF2LXQ8IUE1 241 aa9.36□□□□□ -0.91
COL12A1-203ENST00000416123 TCEAL7Q9BRU2 100 aa9.36□□□□□ -0.91
COL12A1-203ENST00000416123 G3V3Q6 166 aa9.36□□□□□ -0.91
COL12A1-203ENST00000416123 IGKV1D-16P01601 117 aa9.36□□□□□ -0.91
COL12A1-203ENST00000416123 TGIF1Q15583 401 aa9.36□□□□□ -0.91
COL12A1-203ENST00000416123 OR2W3Q7Z3T1 314 aa9.36□□□□□ -0.91
COL12A1-203ENST00000416123 MDP1Q86V88 176 aa9.36□□□□□ -0.91
COL12A1-203ENST00000416123 ABHD14AQ9BUJ0 271 aa9.36□□□□□ -0.91
COL12A1-203ENST00000416123 FOXS1O43638 330 aa9.36□□□□□ -0.91
COL12A1-203ENST00000416123 MDH2P40926 338 aaKnown RBP9.36□□□□□ -0.91
COL12A1-203ENST00000416123 FGF8P55075 233 aaPredicted RBP9.36□□□□□ -0.91
COL12A1-203ENST00000416123 LYZP61626 148 aa9.36□□□□□ -0.91
COL12A1-203ENST00000416123 KIAA0141Q14154 515 aaPredicted RBP9.36□□□□□ -0.91
COL12A1-203ENST00000416123 OR1L4Q8NGR5 311 aa9.36□□□□□ -0.91
COL12A1-203ENST00000416123 ISXQ2M1V0 245 aa9.36□□□□□ -0.91
COL12A1-203ENST00000416123 ST8SIA2Q92186 375 aa9.36□□□□□ -0.91
COL12A1-203ENST00000416123 GPR35Q9HC97 309 aa9.36□□□□□ -0.91
COL12A1-203ENST00000416123 LSM11P83369 360 aaKnown RBP eCLIP9.36□□□□□ -0.91
COL12A1-203ENST00000416123 ATP1A1-AS1Q5TC04 95 aa9.36□□□□□ -0.91
COL12A1-203ENST00000416123 ZMIZ1Q9ULJ6 1067 aa9.36□□□□□ -0.91
COL12A1-203ENST00000416123 XKRY2A2RUG3 117 aa9.36□□□□□ -0.91
COL12A1-203ENST00000416123 SLC25A5P05141 298 aaKnown RBP9.36□□□□□ -0.91
COL12A1-203ENST00000416123 OXA1LQ15070 435 aa9.36□□□□□ -0.91
COL12A1-203ENST00000416123 SLC25A45Q8N413 288 aa9.36□□□□□ -0.91
COL12A1-203ENST00000416123 OPN3Q9H1Y3 402 aaPredicted RBP9.36□□□□□ -0.91
COL12A1-203ENST00000416123 YLPM1P49750 1951 aaKnown RBP9.36□□□□□ -0.91
COL12A1-203ENST00000416123 SCO1O75880 301 aa9.36□□□□□ -0.91
COL12A1-203ENST00000416123 PNPP00491 289 aa9.36□□□□□ -0.91
COL12A1-203ENST00000416123 NCR3LG1Q68D85 454 aa9.36□□□□□ -0.91
COL12A1-203ENST00000416123 TBC1D26Q86UD7 250 aa9.36□□□□□ -0.91
COL12A1-203ENST00000416123 LIMS3P0CW19 117 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 LIMS4P0CW20 117 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 RAB7AP51149 207 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 MIDNQ504T8 468 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 NUFIP2Q7Z417 695 aaKnown RBP9.35□□□□□ -0.91
COL12A1-203ENST00000416123 MAP6Q96JE9 813 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 TCRBV16S1A1N1A0A5B0 115 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 RFPL4AA6NLU0 287 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 RFPL4AL1F8VTS6 287 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 GYPAP02724 150 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 FNDC7Q5VTL7 733 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 SEBOXQ9HB31 216 aaPredicted RBP9.35□□□□□ -0.91
COL12A1-203ENST00000416123 GLRX2Q9NS18 164 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 OR6C3Q9NZP0 311 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 IGHV1-45A0A0A0MS14 117 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 IGKV1-8A0A0C4DH67 115 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 PDCD6O75340 191 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 IGHA2P01877 340 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 FGF2P09038 288 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 PTP4A1Q93096 173 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 PCGF1Q9BSM1 259 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 RAB19A4D1S5 217 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 SSBP1Q04837 148 aaKnown RBP9.35□□□□□ -0.91
COL12A1-203ENST00000416123 AESQ08117 197 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 NHLRC1Q6VVB1 395 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 GLDNQ6ZMI3 551 aaPredicted RBP9.35□□□□□ -0.91
COL12A1-203ENST00000416123 OR5C1Q8NGR4 320 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 ZNF385AQ96PM9 386 aaKnown RBP9.35□□□□□ -0.91
COL12A1-203ENST00000416123 OR2H1Q9GZK4 316 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 C12orf10Q9HB07 376 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 GBF1Q92538 1859 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 APC2O95996 2303 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 ATP6V1G2-DDX39BF2Z307 99 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 TCAPO15273 167 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 FAM219AQ8IW50 185 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 MUC20Q8N307 709 aaPredicted RBP9.35□□□□□ -0.91
COL12A1-203ENST00000416123 C11orf42Q8N5U0 333 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 SLIRPQ9GZT3 109 aaKnown RBP9.35□□□□□ -0.91
COL12A1-203ENST00000416123 TRAPPC4Q9Y296 219 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 C1QAP02745 245 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 ARG1P05089 322 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 FAM122BQ7Z309 247 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.35□□□□□ -0.91
COL12A1-203ENST00000416123 GOLT1BQ9Y3E0 138 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 KPTNQ9Y664 436 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 CD37P11049 281 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 FABP9Q0Z7S8 132 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 FGF11Q92914 225 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 ZNF501Q96CX3 271 aaPredicted RBP9.35□□□□□ -0.91
COL12A1-203ENST00000416123 CABLES2Q9BTV7 478 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 UCK1Q9HA47 277 aa9.35□□□□□ -0.91
COL12A1-203ENST00000416123 A0A1W2PQD3 144 aa9.34□□□□□ -0.91
COL12A1-203ENST00000416123 F2RL2O00254 374 aa9.34□□□□□ -0.91
COL12A1-203ENST00000416123 ADRB1P08588 477 aa9.34□□□□□ -0.91
COL12A1-203ENST00000416123 SP9P0CG40 484 aa9.34□□□□□ -0.91
COL12A1-203ENST00000416123 REG1BP48304 166 aa9.34□□□□□ -0.91
COL12A1-203ENST00000416123 DHRS7BQ6IAN0 325 aaPredicted RBP9.34□□□□□ -0.91
COL12A1-203ENST00000416123 RSRP1Q9BUV0 290 aa9.34□□□□□ -0.91
COL12A1-203ENST00000416123 OR2J1Q9GZK6 312 aa9.34□□□□□ -0.91
COL12A1-203ENST00000416123 ZNF629Q9UEG4 869 aaPredicted RBP9.34□□□□□ -0.91
COL12A1-203ENST00000416123 CTSBP07858 339 aa9.34□□□□□ -0.91
COL12A1-203ENST00000416123 DHRS2Q13268 280 aa9.34□□□□□ -0.91
COL12A1-203ENST00000416123 INPP5JQ15735 1006 aaPredicted RBP9.34□□□□□ -0.91
COL12A1-203ENST00000416123 NSUN5P2Q63ZY6 315 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms