RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 CDK5R1Q15078 307 aa17.87■□□□□ 0.45
AP1S3-205ENST00000415298 TMEM170AQ8WVE7 144 aa17.87■□□□□ 0.45
AP1S3-205ENST00000415298 C5AR2Q9P296 337 aa17.87■□□□□ 0.45
AP1S3-205ENST00000415298 M0QYG6 137 aa17.86■□□□□ 0.45
AP1S3-205ENST00000415298 CDIPTO14735 213 aa17.86■□□□□ 0.45
AP1S3-205ENST00000415298 PIN1P1O15428 100 aa17.86■□□□□ 0.45
AP1S3-205ENST00000415298 TIAF1O95411 115 aa17.86■□□□□ 0.45
AP1S3-205ENST00000415298 PET100P0DJ07 73 aa17.86■□□□□ 0.45
AP1S3-205ENST00000415298 CCL4P13236 92 aa17.86■□□□□ 0.45
AP1S3-205ENST00000415298 EDNRAP25101 427 aa17.86■□□□□ 0.45
AP1S3-205ENST00000415298 PRSS53Q2L4Q9 553 aa17.86■□□□□ 0.45
AP1S3-205ENST00000415298 APH1AQ96BI3 265 aa17.86■□□□□ 0.45
AP1S3-205ENST00000415298 ATP6V0BQ99437 205 aa17.86■□□□□ 0.45
AP1S3-205ENST00000415298 FUT9Q9Y231 359 aa17.86■□□□□ 0.45
AP1S3-205ENST00000415298 ZC3H12DA2A288 527 aaKnown RBP17.86■□□□□ 0.45
AP1S3-205ENST00000415298 GLOD5A6NK44 160 aa17.86■□□□□ 0.45
AP1S3-205ENST00000415298 FOXS1O43638 330 aa17.86■□□□□ 0.45
AP1S3-205ENST00000415298 CRYGCP07315 174 aa17.86■□□□□ 0.45
AP1S3-205ENST00000415298 SRP19P09132 144 aaKnown RBP17.86■□□□□ 0.45
AP1S3-205ENST00000415298 SEC11BP0C7V7 166 aa17.86■□□□□ 0.45
AP1S3-205ENST00000415298 ZNF85Q03923 595 aa17.86■□□□□ 0.45
AP1S3-205ENST00000415298 BSXQ3C1V8 233 aa17.86■□□□□ 0.45
AP1S3-205ENST00000415298 WFDC1Q9HC57 220 aa17.86■□□□□ 0.45
AP1S3-205ENST00000415298 TRAPPC6AO75865 159 aa17.85■□□□□ 0.45
AP1S3-205ENST00000415298 HLA-DRB3P79483 266 aa17.85■□□□□ 0.45
AP1S3-205ENST00000415298 RBFOX3A6NFN3 312 aa17.84■□□□□ 0.45
AP1S3-205ENST00000415298 OR5B21A6NL26 309 aa17.84■□□□□ 0.45
AP1S3-205ENST00000415298 RAMP3O60896 148 aa17.84■□□□□ 0.45
AP1S3-205ENST00000415298 CHRM2P08172 466 aa17.84■□□□□ 0.45
AP1S3-205ENST00000415298 PTNP21246 168 aa17.84■□□□□ 0.45
AP1S3-205ENST00000415298 EMP2P54851 167 aa17.84■□□□□ 0.45
AP1S3-205ENST00000415298 C5orf64Q2M2E5 130 aa17.84■□□□□ 0.45
AP1S3-205ENST00000415298 CYB561A3Q8NBI2 242 aa17.84■□□□□ 0.45
AP1S3-205ENST00000415298 BHLHE23Q8NDY6 225 aa17.84■□□□□ 0.45
AP1S3-205ENST00000415298 OR5AK3PQ8NH89 298 aa17.84■□□□□ 0.45
AP1S3-205ENST00000415298 BET1LQ9NYM9 111 aa17.84■□□□□ 0.45
AP1S3-205ENST00000415298 NSDHLQ15738 373 aa17.84■□□□□ 0.45
AP1S3-205ENST00000415298 FAM220AQ7Z4H9 259 aa17.84■□□□□ 0.45
AP1S3-205ENST00000415298 TMEM144Q7Z5S9 345 aa17.84■□□□□ 0.45
AP1S3-205ENST00000415298 OR13C9Q8NGT0 318 aa17.84■□□□□ 0.45
AP1S3-205ENST00000415298 OR2T27Q8NH04 317 aa17.84■□□□□ 0.45
AP1S3-205ENST00000415298 KLHL28Q9NXS3 571 aa17.84■□□□□ 0.45
AP1S3-205ENST00000415298 CNIH4Q9P003 139 aa17.84■□□□□ 0.45
AP1S3-205ENST00000415298 TRAV18A0A075B6X5 111 aa17.83■□□□□ 0.45
AP1S3-205ENST00000415298 A0A1W2PNV4 684 aa17.83■□□□□ 0.45
AP1S3-205ENST00000415298 CD1AP06126 327 aa17.83■□□□□ 0.45
AP1S3-205ENST00000415298 ZNF10P21506 573 aaPredicted RBP17.83■□□□□ 0.45
AP1S3-205ENST00000415298 RAB38P57729 211 aa17.83■□□□□ 0.45
AP1S3-205ENST00000415298 LASP1Q14847 261 aaKnown RBP17.83■□□□□ 0.45
AP1S3-205ENST00000415298 SLC38A9Q8NBW4 561 aa17.83■□□□□ 0.45
AP1S3-205ENST00000415298 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.83■□□□□ 0.45
AP1S3-205ENST00000415298 P4HTMQ9NXG6 502 aa17.83■□□□□ 0.45
AP1S3-205ENST00000415298 SIDT1Q9NXL6 827 aaKnown RBP17.83■□□□□ 0.45
AP1S3-205ENST00000415298 SERTAD3Q9UJW9 196 aa17.83■□□□□ 0.45
AP1S3-205ENST00000415298 TNFSF15O95150 251 aa17.83■□□□□ 0.44
AP1S3-205ENST00000415298 PRH1P02810 166 aa17.83■□□□□ 0.44
AP1S3-205ENST00000415298 SCAND1P57086 179 aa17.83■□□□□ 0.44
AP1S3-205ENST00000415298 ZNF385BQ569K4 471 aa17.83■□□□□ 0.44
AP1S3-205ENST00000415298 FAM71E1Q6IPT2 247 aa17.83■□□□□ 0.44
AP1S3-205ENST00000415298 THSD4Q6ZMP0 1018 aa17.83■□□□□ 0.44
AP1S3-205ENST00000415298 NIT1Q86X76 327 aa17.83■□□□□ 0.44
AP1S3-205ENST00000415298 ZDHHC22Q8N966 263 aa17.83■□□□□ 0.44
AP1S3-205ENST00000415298 TMEM121BQ9BXQ6 578 aaPredicted RBP17.83■□□□□ 0.44
AP1S3-205ENST00000415298 NMNAT2Q9BZQ4 307 aa17.83■□□□□ 0.44
AP1S3-205ENST00000415298 UQCR10Q9UDW1 63 aa17.83■□□□□ 0.44
AP1S3-205ENST00000415298 FER1L5A0AVI2 2057 aa17.83■□□□□ 0.44
AP1S3-205ENST00000415298 TRAV26-1A0A087WT03 109 aa17.82■□□□□ 0.44
AP1S3-205ENST00000415298 A0A087WUU8 490 aa17.82■□□□□ 0.44
AP1S3-205ENST00000415298 FITM1A5D6W6 292 aa17.82■□□□□ 0.44
AP1S3-205ENST00000415298 COLCA1Q6ZS62 124 aa17.82■□□□□ 0.44
AP1S3-205ENST00000415298 COMMD2Q86X83 199 aa17.82■□□□□ 0.44
AP1S3-205ENST00000415298 OR52L2PQ8NGH6 319 aa17.82■□□□□ 0.44
AP1S3-205ENST00000415298 SLC38A5Q8WUX1 472 aa17.82■□□□□ 0.44
AP1S3-205ENST00000415298 KISS1RQ969F8 398 aaPredicted RBP17.82■□□□□ 0.44
AP1S3-205ENST00000415298 IMMP2LQ96T52 175 aa17.82■□□□□ 0.44
AP1S3-205ENST00000415298 NICN1Q9BSH3 213 aa17.82■□□□□ 0.44
AP1S3-205ENST00000415298 CHODLQ9H9P2 273 aa17.82■□□□□ 0.44
AP1S3-205ENST00000415298 GJE1A6NN92 205 aa17.82■□□□□ 0.44
AP1S3-205ENST00000415298 TM4SF5O14894 197 aa17.82■□□□□ 0.44
AP1S3-205ENST00000415298 CT45A8P0DMV1 189 aa17.82■□□□□ 0.44
AP1S3-205ENST00000415298 CT45A9P0DMV2 189 aa17.82■□□□□ 0.44
AP1S3-205ENST00000415298 PPP1CCP36873 323 aaKnown RBP17.82■□□□□ 0.44
AP1S3-205ENST00000415298 OR1D4P47884 311 aa17.82■□□□□ 0.44
AP1S3-205ENST00000415298 PAX2Q02962 417 aa17.82■□□□□ 0.44
AP1S3-205ENST00000415298 ACOT6Q3I5F7 207 aaPredicted RBP17.82■□□□□ 0.44
AP1S3-205ENST00000415298 CT45A2Q5DJT8 189 aa17.82■□□□□ 0.44
AP1S3-205ENST00000415298 TGIF2LYQ8IUE0 185 aa17.82■□□□□ 0.44
AP1S3-205ENST00000415298 OR2T33Q8NG76 320 aa17.82■□□□□ 0.44
AP1S3-205ENST00000415298 TMEM106BQ9NUM4 274 aa17.82■□□□□ 0.44
AP1S3-205ENST00000415298 MRPL27Q9P0M9 148 aaKnown RBP17.82■□□□□ 0.44
AP1S3-205ENST00000415298 FBXL17Q9UF56 701 aa17.82■□□□□ 0.44
AP1S3-205ENST00000415298 FREM2Q5SZK8 3169 aa17.82■□□□□ 0.44
AP1S3-205ENST00000415298 A0A1B0GU03 582 aa17.81■□□□□ 0.44
AP1S3-205ENST00000415298 GNG7O60262 68 aa17.81■□□□□ 0.44
AP1S3-205ENST00000415298 TBX19O60806 448 aa17.81■□□□□ 0.44
AP1S3-205ENST00000415298 CTSDP07339 412 aaPredicted RBP17.81■□□□□ 0.44
AP1S3-205ENST00000415298 MMABQ96EY8 250 aaPredicted RBP17.81■□□□□ 0.44
AP1S3-205ENST00000415298 PLK3Q9H4B4 646 aa17.81■□□□□ 0.44
AP1S3-205ENST00000415298 CDV3Q9UKY7 258 aaKnown RBP17.81■□□□□ 0.44
AP1S3-205ENST00000415298 DAPP1Q9UN19 280 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms