RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 XAF1Q6GPH4 301 aa9.15□□□□□ -0.94
RFFL-204ENST00000414419 SHISA2Q6UWI4 295 aa9.15□□□□□ -0.94
RFFL-204ENST00000414419 ZNF782Q6ZMW2 699 aaPredicted RBP9.15□□□□□ -0.94
RFFL-204ENST00000414419 C17orf107Q6ZR85 190 aa9.15□□□□□ -0.94
RFFL-204ENST00000414419 AHSA2Q719I0 299 aa9.15□□□□□ -0.94
RFFL-204ENST00000414419 TRAPPC6BQ86SZ2 158 aa9.15□□□□□ -0.94
RFFL-204ENST00000414419 OR13D1Q8NGV5 346 aa9.15□□□□□ -0.94
RFFL-204ENST00000414419 OR5R1Q8NH85 324 aa9.15□□□□□ -0.94
RFFL-204ENST00000414419 TAF15Q92804 592 aaKnown RBP eCLIP9.15□□□□□ -0.942e-6■■□□□ 11.9
RFFL-204ENST00000414419 SMIM19Q96E16 107 aa9.15□□□□□ -0.94
RFFL-204ENST00000414419 S100A13Q99584 98 aa9.15□□□□□ -0.94
RFFL-204ENST00000414419 ZNF747Q9BV97 191 aa9.15□□□□□ -0.94
RFFL-204ENST00000414419 FAM192AQ9GZU8 254 aa9.15□□□□□ -0.94
RFFL-204ENST00000414419 BEX1Q9HBH7 125 aa9.15□□□□□ -0.94
RFFL-204ENST00000414419 TAS2R4Q9NYW5 299 aa9.15□□□□□ -0.94
RFFL-204ENST00000414419 CKLFQ9UBR5 152 aa9.15□□□□□ -0.94
RFFL-204ENST00000414419 MEX3AA1L020 520 aaKnown RBP9.14□□□□□ -0.95
RFFL-204ENST00000414419 ERICH4A6NGS2 130 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 DEGS1O15121 323 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 XPNPEP2O43895 674 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 GPR137BO60478 399 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 PSPNO60542 156 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 RBP4P02753 201 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 MDKP21741 143 aaPredicted RBP9.14□□□□□ -0.95
RFFL-204ENST00000414419 RAG2P55895 527 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 TAS2R43P59537 309 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 ZP1P60852 638 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 RSU1Q15404 277 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 HCP5Q6MZN7 132 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 RNF144BQ7Z419 303 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 C11orf42Q8N5U0 333 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 TPRX1Q8N7U7 411 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 CHST4Q8NCG5 386 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 BEND2Q8NDZ0 799 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 PXT1Q8NFP0 134 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 OR4S1Q8NGB4 309 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 OR52N4Q8NGI2 321 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 SGMS2Q8NHU3 365 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 RPS4Y2Q8TD47 263 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 TNFAIP8L1Q8WVP5 186 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 RGP1Q92546 391 aaPredicted RBP9.14□□□□□ -0.95
RFFL-204ENST00000414419 TFAP2CQ92754 450 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 GHSRQ92847 366 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 NR1H4Q96RI1 486 aaPredicted RBP9.14□□□□□ -0.95
RFFL-204ENST00000414419 TMEM138Q9NPI0 162 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 PLCXD1Q9NUJ7 323 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 C1RLQ9NZP8 487 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 NKX1-2Q9UD57 310 aaPredicted RBP9.14□□□□□ -0.95
RFFL-204ENST00000414419 PSORS1C1Q9UIG5 152 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 VPREB3Q9UKI3 123 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 ERGIC3Q9Y282 383 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 LINC00312Q9Y6C7 94 aa9.14□□□□□ -0.95
RFFL-204ENST00000414419 SIRT4Q9Y6E7 314 aaPredicted RBP9.14□□□□□ -0.95
RFFL-204ENST00000414419 FBN3Q75N90 2809 aa9.13□□□□□ -0.95
RFFL-204ENST00000414419 TRGV10A0A0A0MS01 117 aa9.13□□□□□ -0.95
RFFL-204ENST00000414419 H0YHG0 523 aa9.13□□□□□ -0.95
RFFL-204ENST00000414419 NDUFA7O95182 113 aa9.13□□□□□ -0.95
RFFL-204ENST00000414419 LALBAP00709 142 aa9.13□□□□□ -0.95
RFFL-204ENST00000414419 ALDOBP05062 364 aa9.13□□□□□ -0.95
RFFL-204ENST00000414419 ARG1P05089 322 aa9.13□□□□□ -0.95
RFFL-204ENST00000414419 IGHV1-8P0DP01 117 aa9.13□□□□□ -0.95
RFFL-204ENST00000414419 LMO1P25800 156 aa9.13□□□□□ -0.95
RFFL-204ENST00000414419 ERP29P30040 261 aaKnown RBP9.13□□□□□ -0.95
RFFL-204ENST00000414419 BDKRB2P30411 391 aa9.13□□□□□ -0.95
RFFL-204ENST00000414419 ZNF93P35789 620 aaPredicted RBP9.13□□□□□ -0.95
RFFL-204ENST00000414419 OR3A1P47881 315 aa9.13□□□□□ -0.95
RFFL-204ENST00000414419 DLX6P56179 175 aa9.13□□□□□ -0.95
RFFL-204ENST00000414419 P2RX3P56373 397 aa9.13□□□□□ -0.95
RFFL-204ENST00000414419 WNT4P56705 351 aa9.13□□□□□ -0.95
RFFL-204ENST00000414419 DYNC1I2Q13409 638 aaKnown RBP9.13□□□□□ -0.95
RFFL-204ENST00000414419 RIPK1Q13546 671 aa9.13□□□□□ -0.95
RFFL-204ENST00000414419 Q499Y3 187 aa9.13□□□□□ -0.95
RFFL-204ENST00000414419 YIF1BQ5BJH7 314 aa9.13□□□□□ -0.95
RFFL-204ENST00000414419 DMKNQ6E0U4 476 aaPredicted RBP9.13□□□□□ -0.95
RFFL-204ENST00000414419 DHRS7BQ6IAN0 325 aaPredicted RBP9.13□□□□□ -0.95
RFFL-204ENST00000414419 ZFP41Q8N8Y5 198 aa9.13□□□□□ -0.95
RFFL-204ENST00000414419 OR51A2Q8NGJ7 313 aa9.13□□□□□ -0.95
RFFL-204ENST00000414419 SSX3Q99909 188 aa9.13□□□□□ -0.95
RFFL-204ENST00000414419 PPA2Q9H2U2 334 aa9.13□□□□□ -0.95
RFFL-204ENST00000414419 VCX3BQ9H321 246 aa9.13□□□□□ -0.95
RFFL-204ENST00000414419 PCDHB16Q9NRJ7 776 aa9.13□□□□□ -0.95
RFFL-204ENST00000414419 ING3Q9NXR8 418 aa9.13□□□□□ -0.95
RFFL-204ENST00000414419 SCN3BQ9NY72 215 aa9.13□□□□□ -0.95
RFFL-204ENST00000414419 ING4Q9UNL4 249 aa9.13□□□□□ -0.95
RFFL-204ENST00000414419 UBE2J1Q9Y385 318 aaPredicted RBP9.13□□□□□ -0.95
RFFL-204ENST00000414419 MMP24Q9Y5R2 645 aa9.13□□□□□ -0.95
RFFL-204ENST00000414419 A0A0G2JK05 382 aa9.12□□□□□ -0.95
RFFL-204ENST00000414419 PNMA8CA0A1B0GUJ8 204 aa9.12□□□□□ -0.95
RFFL-204ENST00000414419 CLPSL1A2RUU4 121 aa9.12□□□□□ -0.95
RFFL-204ENST00000414419 PTGES3LE9PB15 166 aa9.12□□□□□ -0.95
RFFL-204ENST00000414419 H0YJX3 145 aa9.12□□□□□ -0.95
RFFL-204ENST00000414419 H3BUX3 64 aa9.12□□□□□ -0.95
RFFL-204ENST00000414419 GABRPO00591 440 aa9.12□□□□□ -0.95
RFFL-204ENST00000414419 HTR3BO95264 441 aa9.12□□□□□ -0.95
RFFL-204ENST00000414419 CSTBP04080 98 aaKnown RBP9.12□□□□□ -0.95
RFFL-204ENST00000414419 CELP19835 753 aa9.12□□□□□ -0.95
RFFL-204ENST00000414419 C21orf33P30042 268 aaPredicted RBP9.12□□□□□ -0.95
RFFL-204ENST00000414419 TGFBR2P37173 567 aa9.12□□□□□ -0.95
RFFL-204ENST00000414419 PTGFRP43088 359 aa9.12□□□□□ -0.95
RFFL-204ENST00000414419 AESQ08117 197 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms