RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 PELI2Q9HAT8 420 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 TMEM56-RWDD3S4R434 201 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 NPHP4O75161 1426 aaPredicted RBP4.1□□□□□ -1.75
PTPN13-202ENST00000411767 LAMC1P11047 1609 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 NCOA3Q9Y6Q9 1424 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 TRAV2A0A0B4J234 112 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 ALG1L2C9J202 215 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 SELLP14151 372 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 CDKN1AP38936 164 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 RABIFP47224 123 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 SCAND1P57086 179 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 OR1Q1Q15612 314 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 TMEM155Q4W5P6 130 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 FCRL6Q6DN72 434 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 OR4D5Q8NGN0 318 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 TXNDC17Q9BRA2 123 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 PRR14Q9BWN1 585 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 CHODLQ9H9P2 273 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 WSB2Q9NYS7 404 aaPredicted RBP4.09□□□□□ -1.75
PTPN13-202ENST00000411767 ZNF107Q9UII5 783 aaPredicted RBP4.09□□□□□ -1.75
PTPN13-202ENST00000411767 TMED3Q9Y3Q3 217 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 TRBV20-1A0A075B6N2 111 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.09□□□□□ -1.75
PTPN13-202ENST00000411767 CXorf65A6NEN9 183 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 ZNF98A6NK75 572 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 TAPBPO15533 448 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 CFDP00746 253 aaPredicted RBP4.09□□□□□ -1.75
PTPN13-202ENST00000411767 SDC1P18827 310 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 GCAP28676 217 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 AVPR2P30518 371 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 GPR183P32249 361 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 GPX4P36969 197 aaPredicted RBP4.09□□□□□ -1.75
PTPN13-202ENST00000411767 LHX2P50458 406 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 PITX1P78337 314 aaPredicted RBP4.09□□□□□ -1.75
PTPN13-202ENST00000411767 C8orf31Q8N9H6 132 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 WFDC9Q8NEX5 89 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 CLEC4CQ8WTT0 213 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 IL36GQ9NZH8 169 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 NME4O00746 187 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 SRSF10O75494 262 aaKnown RBP4.09□□□□□ -1.75
PTPN13-202ENST00000411767 DRD3P35462 400 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 INHBEP58166 350 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 C9orf135Q5VTT2 229 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 CCDC144NLQ6NUI1 221 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 BHLHE23Q8NDY6 225 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 OR52B4Q8NGK2 314 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 GNRHR2Q96P88 292 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 COL1A2P08123 1366 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 CDK12Q9NYV4 1490 aaPredicted RBP4.09□□□□□ -1.75
PTPN13-202ENST00000411767 A0A087WWV3 80 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 IGKV3OR2-268A0A0C4DH90 116 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 A0A1W2PQH9 124 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 IFITM5A6NNB3 132 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 C9orf172C9J069 976 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 SOCS3O14543 225 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 CD160O95971 181 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 GABRA1P14867 456 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 SNRPD3P62318 126 aaKnown RBP4.09□□□□□ -1.75
PTPN13-202ENST00000411767 SIRPAP78324 504 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 HSD11B1LQ7Z5J1 315 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 ATG4DQ86TL0 474 aaPredicted RBP4.09□□□□□ -1.75
PTPN13-202ENST00000411767 SIRT6Q8N6T7 355 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 NAT6Q93015 286 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 RNF208Q9H0X6 261 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 DEPDC5O75140 1603 aa4.09□□□□□ -1.75
PTPN13-202ENST00000411767 GDF9O60383 454 aa4.09□□□□□ -1.76
PTPN13-202ENST00000411767 CST3P01034 146 aaPredicted RBP4.09□□□□□ -1.76
PTPN13-202ENST00000411767 EDN3P14138 238 aa4.09□□□□□ -1.76
PTPN13-202ENST00000411767 GNLYP22749 145 aa4.09□□□□□ -1.76
PTPN13-202ENST00000411767 SRD5A2P31213 254 aa4.09□□□□□ -1.76
PTPN13-202ENST00000411767 RUNX3Q13761 415 aa4.09□□□□□ -1.76
PTPN13-202ENST00000411767 DMRTC1Q5HYR2 192 aa4.09□□□□□ -1.76
PTPN13-202ENST00000411767 ATOH7Q8N100 152 aa4.09□□□□□ -1.76
PTPN13-202ENST00000411767 OR10G9Q8NGN4 311 aa4.09□□□□□ -1.76
PTPN13-202ENST00000411767 SLC25A43Q8WUT9 341 aaPredicted RBP4.09□□□□□ -1.76
PTPN13-202ENST00000411767 DOK1Q99704 481 aa4.09□□□□□ -1.76
PTPN13-202ENST00000411767 AUNIPQ9H7T9 357 aa4.09□□□□□ -1.76
PTPN13-202ENST00000411767 GPR45Q9Y5Y3 372 aa4.09□□□□□ -1.76
PTPN13-202ENST00000411767 F11RQ9Y624 299 aaKnown RBP4.09□□□□□ -1.76
PTPN13-202ENST00000411767 ASXL2Q76L83 1435 aa4.09□□□□□ -1.76
PTPN13-202ENST00000411767 INO80Q9ULG1 1556 aaPredicted RBP4.09□□□□□ -1.76
PTPN13-202ENST00000411767 A0A0A6YYC8 382 aaPredicted RBP4.09□□□□□ -1.76
PTPN13-202ENST00000411767 TMEM8BA6NDV4 472 aa4.09□□□□□ -1.76
PTPN13-202ENST00000411767 TMEM202A6NGA9 273 aa4.09□□□□□ -1.76
PTPN13-202ENST00000411767 FIGNL2A6NMB9 653 aa4.09□□□□□ -1.76
PTPN13-202ENST00000411767 KNCNA6PVL3 124 aa4.09□□□□□ -1.76
PTPN13-202ENST00000411767 I3L1I5 382 aaPredicted RBP4.09□□□□□ -1.76
PTPN13-202ENST00000411767 CD44P16070 742 aaKnown RBP4.09□□□□□ -1.76
PTPN13-202ENST00000411767 CD70P32970 193 aa4.09□□□□□ -1.76
PTPN13-202ENST00000411767 KLK7P49862 253 aa4.09□□□□□ -1.76
PTPN13-202ENST00000411767 ID3Q02535 119 aa4.09□□□□□ -1.76
PTPN13-202ENST00000411767 FUT7Q11130 342 aa4.09□□□□□ -1.76
PTPN13-202ENST00000411767 UTF1Q5T230 341 aa4.09□□□□□ -1.76
PTPN13-202ENST00000411767 C1orf53Q5VUE5 145 aa4.09□□□□□ -1.76
PTPN13-202ENST00000411767 TPGS2Q68CL5 300 aa4.09□□□□□ -1.76
PTPN13-202ENST00000411767 GAGE2AQ6NT46 116 aa4.09□□□□□ -1.76
PTPN13-202ENST00000411767 GLIPR1L1Q6UWM5 242 aa4.09□□□□□ -1.76
PTPN13-202ENST00000411767 PLPPR4Q7Z2D5 763 aa4.09□□□□□ -1.76
PTPN13-202ENST00000411767 BCORP1Q8N888 145 aa4.09□□□□□ -1.76
PTPN13-202ENST00000411767 IGFBPL1Q8WX77 278 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms