RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 CYGBQ8WWM9 190 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 NEURL3Q96EH8 262 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 CAMK2N2Q96S95 79 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 EBNA1BP2Q99848 306 aaKnown RBP3.47□□□□□ -1.85
LSM5-205ENST00000409952 ZNF649Q9BS31 505 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 CHST5Q9GZS9 411 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 CENPHQ9H3R5 247 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 FBXL15Q9H469 300 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 STOML2Q9UJZ1 356 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 ZNF225Q9UK10 706 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 INSIG2Q9Y5U4 225 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 A0A1W2PP64 1363 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 KRTAP16-1A8MUX0 517 aa3.46□□□□□ -1.86
LSM5-205ENST00000409952 C8orf87E5RJ46 101 aa3.46□□□□□ -1.86
LSM5-205ENST00000409952 MFNGO00587 321 aa3.46□□□□□ -1.86
LSM5-205ENST00000409952 FFAR1O14842 300 aa3.46□□□□□ -1.86
LSM5-205ENST00000409952 SS18L1O75177 396 aaPredicted RBP3.46□□□□□ -1.86
LSM5-205ENST00000409952 OR4Q2P0C623 313 aa3.46□□□□□ -1.86
LSM5-205ENST00000409952 CFL1P23528 166 aaKnown RBP3.46□□□□□ -1.86
LSM5-205ENST00000409952 ADORA1P30542 326 aa3.46□□□□□ -1.86
LSM5-205ENST00000409952 ZNF136P52737 540 aa3.46□□□□□ -1.86
LSM5-205ENST00000409952 POLR2GP62487 172 aaKnown RBP eCLIP3.46□□□□□ -1.86
LSM5-205ENST00000409952 GTF2BQ00403 316 aa3.46□□□□□ -1.86
LSM5-205ENST00000409952 SMUG1Q53HV7 270 aa3.46□□□□□ -1.86
LSM5-205ENST00000409952 TCTEX1D4Q5JR98 221 aa3.46□□□□□ -1.86
LSM5-205ENST00000409952 CLLU1OSQ5K130 101 aa3.46□□□□□ -1.86
LSM5-205ENST00000409952 C9orf129Q5T035 196 aaKnown RBP3.46□□□□□ -1.86
LSM5-205ENST00000409952 FBXL22Q6P050 247 aa3.46□□□□□ -1.86
LSM5-205ENST00000409952 NT5DC3Q86UY8 548 aa3.46□□□□□ -1.86
LSM5-205ENST00000409952 NIT1Q86X76 327 aa3.46□□□□□ -1.86
LSM5-205ENST00000409952 OR4M2Q8NGB6 313 aa3.46□□□□□ -1.86
LSM5-205ENST00000409952 OR52P1PQ8NH57 321 aa3.46□□□□□ -1.86
LSM5-205ENST00000409952 CLDN23Q96B33 292 aa3.46□□□□□ -1.86
LSM5-205ENST00000409952 IMP4Q96G21 291 aaKnown RBP3.46□□□□□ -1.86
LSM5-205ENST00000409952 SLC17A9Q9BYT1 436 aa3.46□□□□□ -1.86
LSM5-205ENST00000409952 ASB7Q9H672 318 aa3.46□□□□□ -1.86
LSM5-205ENST00000409952 WSB1Q9Y6I7 421 aa3.46□□□□□ -1.86
LSM5-205ENST00000409952 MN1Q10571 1320 aaPredicted RBP3.45□□□□□ -1.86
LSM5-205ENST00000409952 IGLV1-50A0A075B6I6 118 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 A0A0U1RQV1 116 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 FAM168BA1KXE4 195 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 MYBPHLA2RUH7 354 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 LAD1O00515 517 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 TRAF3IP2O43734 574 aaPredicted RBP3.45□□□□□ -1.86
LSM5-205ENST00000409952 SERPINA1P01009 418 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 IGHV4-34P06331 123 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 MYL12AP19105 171 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 PRTN3P24158 256 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 IL3RAP26951 378 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 AGTR1P30556 359 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 CRISP3P54108 245 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 TAS2R43P59537 309 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 PFN3P60673 137 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 DYNLL1P63167 89 aaKnown RBP3.45□□□□□ -1.86
LSM5-205ENST00000409952 OR2F1Q13607 317 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 HIST3H3Q16695 136 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 TMEM205Q6UW68 189 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 RASSF6Q6ZTQ3 369 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 GALNT10Q86SR1 603 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 COMMD7Q86VX2 200 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 OR2M7Q8NG81 312 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 OR4M1Q8NGD0 313 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 OR6K3Q8NGY3 331 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 DTD1Q8TEA8 209 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 C18orf15Q96N68 181 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 SDHCQ99643 169 aaPredicted RBP3.45□□□□□ -1.86
LSM5-205ENST00000409952 DOK1Q99704 481 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 GGTLC1Q9BX51 225 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 MROQ9BYG7 248 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 PARP11Q9NR21 331 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 RBM12B-AS1Q9P1G2 102 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 PSG11Q9UQ72 335 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 FARSAQ9Y285 508 aaKnown RBP3.45□□□□□ -1.86
LSM5-205ENST00000409952 ARL2BPQ9Y2Y0 163 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 KLF13Q9Y2Y9 288 aaPredicted RBP3.45□□□□□ -1.86
LSM5-205ENST00000409952 MMACHCQ9Y4U1 282 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 SNAPC4Q5SXM2 1469 aa3.45□□□□□ -1.86
LSM5-205ENST00000409952 BRCA1P38398 1863 aaKnown RBP3.44□□□□□ -1.86
LSM5-205ENST00000409952 FLT4P35916 1363 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 CARMIL3Q8ND23 1372 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 IGLV11-55A0A075B6I3 123 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 IGKV6D-21A0A0A0MT36 114 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 TRAV8-3A0A0A6YYJ7 113 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 CD300LBA8K4G0 201 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 VGLL3A8MV65 326 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 FADS1O60427 444 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 OR2A4O95047 310 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 TNNC2P02585 160 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 RPSAP08865 295 aaKnown RBP3.44□□□□□ -1.86
LSM5-205ENST00000409952 LINC00614P0C842 121 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 ALOX5APP20292 161 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 G0S2P27469 103 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 CBX5P45973 191 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 SULT1A1P50225 295 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 SULT1A2P50226 295 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 RAB25P57735 213 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 RAB14P61106 215 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 DAZ2Q13117 558 aaKnown RBP3.44□□□□□ -1.86
LSM5-205ENST00000409952 LRRC75BQ2VPJ9 315 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 MPV17L2Q567V2 206 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms