RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 OTOSQ8NHW6 89 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 RPS4Y2Q8TD47 263 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 ST7LQ8TDW4 575 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 C11orf40Q8WZ69 217 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 STARD4Q96DR4 205 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 OR5M11Q96RB7 305 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 OR8B4Q96RC9 309 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 INTS14Q96SY0 518 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 AMELYQ99218 206 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 ATF6BQ99941 703 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 SFXN3Q9BWM7 321 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 ULBP2Q9BZM5 246 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 YIPF3Q9GZM5 350 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 SIAEQ9HAT2 523 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 GNB4Q9HAV0 340 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 CRLF2Q9HC73 371 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 PRR34Q9NV39 138 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 KLK11Q9UBX7 282 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 CLEC2DQ9UHP7 191 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 CYB5R1Q9UHQ9 305 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 MRM2Q9UI43 246 aaKnown RBP3.39□□□□□ -1.87
CLK1-203ENST00000409769 MEMO1Q9Y316 297 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 CAB39Q9Y376 341 aaPredicted RBP3.39□□□□□ -1.87
CLK1-203ENST00000409769 EXOSC1Q9Y3B2 195 aaKnown RBP3.39□□□□□ -1.87
CLK1-203ENST00000409769 LHFPL6Q9Y693 200 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 IGSF10Q6WRI0 2623 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 PLCE1Q9P212 2302 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 RELNP78509 3460 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 KMT2BQ9UMN6 2715 aaPredicted RBP3.38□□□□□ -1.87
CLK1-203ENST00000409769 ITPR1Q14643 2758 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 FAM208BQ5VWN6 2430 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 ZNF670-ZNF695F2Z2N8 137 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 PHYHO14832 338 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 MYL12BO14950 172 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 SULT1C4O75897 302 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 LALBAP00709 142 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 CST2P09228 141 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 MMP7P09237 267 aaPredicted RBP3.38□□□□□ -1.87
CLK1-203ENST00000409769 OR8G3PP0DMU2 310 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 B4GALT1P15291 398 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 ATP6V1B1P15313 513 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 SELEP16581 610 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 MYL12AP19105 171 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 CRYGSP22914 178 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 GIFP27352 417 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 OTX1P32242 354 aaPredicted RBP3.38□□□□□ -1.87
CLK1-203ENST00000409769 OPRM1P35372 400 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 TGFBR2P37173 567 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 RPS27P42677 84 aaKnown RBP3.38□□□□□ -1.87
CLK1-203ENST00000409769 IER3P46695 156 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 RPL5P46777 297 aaKnown RBP3.38□□□□□ -1.87
CLK1-203ENST00000409769 SH3BGRP55822 239 aaPredicted RBP3.38□□□□□ -1.87
CLK1-203ENST00000409769 WNT4P56705 351 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 ACTA2P62736 377 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 ACTG2P63267 376 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 BDH1Q02338 343 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 MLLT11Q13015 90 aaPredicted RBP3.38□□□□□ -1.87
CLK1-203ENST00000409769 AQP6Q13520 282 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 KIAA0141Q14154 515 aaPredicted RBP3.38□□□□□ -1.87
CLK1-203ENST00000409769 ZNF146Q15072 292 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 SPHARQ15513 63 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 CCDC92Q53HC0 331 aaPredicted RBP3.38□□□□□ -1.87
CLK1-203ENST00000409769 DEGS2Q6QHC5 323 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 ZNF322Q6U7Q0 402 aaPredicted RBP3.38□□□□□ -1.87
CLK1-203ENST00000409769 Q6ZT83 130 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 NCCRP1Q6ZVX7 275 aaPredicted RBP3.38□□□□□ -1.87
CLK1-203ENST00000409769 DPY19L4Q7Z388 723 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 ABHD12BQ7Z5M8 362 aaPredicted RBP3.38□□□□□ -1.87
CLK1-203ENST00000409769 C5orf24Q7Z6I8 188 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 LHFPL3Q86UP9 236 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 ZNF100Q8IYN0 542 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 SYS1Q8N2H4 156 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 SLC22A24Q8N4F4 322 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 POM121L12Q8N7R1 296 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 CNEP1R1Q8N9A8 125 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 OR10H4Q8NGA5 316 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 OR1K1Q8NGR3 316 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 OR13F1Q8NGS4 319 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 CHPT1Q8WUD6 406 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 RNF133Q8WVZ7 376 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 SPRYD4Q8WW59 207 aaPredicted RBP3.38□□□□□ -1.87
CLK1-203ENST00000409769 ASB17Q8WXJ9 295 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 FCGR1BQ92637 280 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 CORO2AQ92828 525 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 TMIGD2Q96BF3 282 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 ZNF75AQ96N20 296 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 OPALINQ96PE5 141 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 TBX5Q99593 518 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 CHCHD5Q9BSY4 110 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 ZNF416Q9BWM5 594 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 MND1Q9BWT6 205 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 RBM24Q9BX46 236 aaKnown RBP3.38□□□□□ -1.87
CLK1-203ENST00000409769 C1orf198Q9H425 327 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 RERGLQ9H628 205 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 ISG20L2Q9H9L3 353 aaKnown RBP3.38□□□□□ -1.87
CLK1-203ENST00000409769 ISYNA1Q9NPH2 558 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 DDX28Q9NUL7 540 aaKnown RBP3.38□□□□□ -1.87
CLK1-203ENST00000409769 ZNF629Q9UEG4 869 aaPredicted RBP3.38□□□□□ -1.87
CLK1-203ENST00000409769 UBQLN2Q9UHD9 624 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 ERGIC3Q9Y282 383 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms