RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 HOXA4Q00056 320 aaPredicted RBP10.85□□□□□ -0.67
SHANK2-203ENST00000409161 TXNDC17Q9BRA2 123 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 SRD5A3Q9H8P0 318 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 ING1Q9UK53 422 aaPredicted RBP10.85□□□□□ -0.67
SHANK2-203ENST00000409161 A0A1B0GV72 72 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 CSNK1EP49674 416 aaKnown RBP10.85□□□□□ -0.67
SHANK2-203ENST00000409161 TMEM33P57088 247 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 ONECUT1Q9UBC0 465 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 CRXO43186 299 aaPredicted RBP10.85□□□□□ -0.67
SHANK2-203ENST00000409161 CDC14BO60729 498 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 PDCD6O75340 191 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 OR4B1Q8NGF8 309 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 NUDT16L1Q9BRJ7 211 aaKnown RBP10.85□□□□□ -0.67
SHANK2-203ENST00000409161 OR2J1Q9GZK6 312 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 SAP30LQ9HAJ7 183 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 PIPOXQ9P0Z9 390 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 FAM157BP0CG42 384 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 COL8A1P27658 744 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 ZNF260Q3ZCT1 412 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 TGIF2LXQ8IUE1 241 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 OR1B1Q8NGR6 318 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 RPEQ96AT9 228 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 MRPL13Q9BYD1 178 aaKnown RBP10.84□□□□□ -0.67
SHANK2-203ENST00000409161 FAM221AA4D161 298 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 NSUN5P2Q63ZY6 315 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 VCX2Q9H322 139 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 QSER1Q2KHR3 1735 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 A0A096LPE4 126 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 A0A1W2PPZ6 126 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 hADV38S2A0JD32 116 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 ZNF750Q32MQ0 723 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 TMEM65Q6PI78 240 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 ZDHHC16Q969W1 377 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 MARCH5Q9NX47 278 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 A0A0A6YYD5 115 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 A0A0B4J2E0 115 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 A0A1B0GX12 115 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 DIRC3C9JPN6 131 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 KIR2DL1P43626 348 aaPredicted RBP10.84□□□□□ -0.67
SHANK2-203ENST00000409161 KIR2DL2P43627 348 aaPredicted RBP10.84□□□□□ -0.67
SHANK2-203ENST00000409161 C19orf57Q0VDD7 668 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 MRGPREQ86SM8 312 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 OR10V1Q8NGI7 309 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 OR2V1Q8NHB1 315 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 SIPA1L3O60292 1781 aaPredicted RBP10.84□□□□□ -0.67
SHANK2-203ENST00000409161 EP300Q09472 2414 aaPredicted RBP10.84□□□□□ -0.67
SHANK2-203ENST00000409161 FGF17O60258 216 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 LGALS7P47929 136 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 ELSPBP1Q96BH3 223 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 GTF3C1Q12789 2109 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 TRDCB7Z8K6 153 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 K7ESF4 209 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 UPK1AO00322 258 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 PAM16Q9Y3D7 125 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 DOCK4Q8N1I0 1966 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 NHSQ6T4R5 1651 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 CTSDP07339 412 aaPredicted RBP10.84□□□□□ -0.67
SHANK2-203ENST00000409161 FBXL14Q8N1E6 418 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 TMEM70Q9BUB7 260 aa10.84□□□□□ -0.67
SHANK2-203ENST00000409161 ZNF275Q9NSD4 429 aaPredicted RBP10.84□□□□□ -0.67
SHANK2-203ENST00000409161 CXorf65A6NEN9 183 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 M0R296 226 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 WNT1P04628 370 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 PABPC1L2AQ5JQF8 200 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 XAF1Q6GPH4 301 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 A0A1W2PPC4 97 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 LINC00862A6NCI5 91 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 CA13Q8N1Q1 262 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 OR2D2Q9H210 308 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 ZGRF1Q86YA3 2104 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 LMX1BO60663 402 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 GAGE10A6NGK3 116 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 OOEPA6NGQ2 149 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 A0A1B0GU03 582 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 ABLIM3O94929 683 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 HPXP02790 462 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 HFEQ30201 348 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 TRILQ7L0X0 811 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 ASCL5Q7RTU5 278 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 UQCR10Q9UDW1 63 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 HCFC2Q9Y5Z7 792 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 ZBTB42B2RXF5 422 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 CA2P00918 260 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 VDAC1P21796 283 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 LIMK1P53667 647 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 JOSD1Q15040 202 aaPredicted RBP10.83□□□□□ -0.68
SHANK2-203ENST00000409161 TMEM179BQ7Z7N9 219 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 PTOV1Q86YD1 416 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 SNRNP40Q96DI7 357 aaKnown RBP10.83□□□□□ -0.68
SHANK2-203ENST00000409161 GABRG3Q99928 467 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 MBNL1Q9NR56 388 aaKnown RBP10.83□□□□□ -0.68
SHANK2-203ENST00000409161 STARD10Q9Y365 291 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 ANKRD20A5PA0PJZ0 165 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 B3GALT4O96024 378 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 MPV17LQ2QL34 196 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 VN1R1Q9GZP7 353 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 ANKRD10Q9NXR5 420 aa10.83□□□□□ -0.68
SHANK2-203ENST00000409161 HMX2A2RU54 273 aa10.82□□□□□ -0.68
SHANK2-203ENST00000409161 NGFP01138 241 aa10.82□□□□□ -0.68
SHANK2-203ENST00000409161 CRYBA1P05813 215 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms