RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-222	ENST00000406454	TMEM38B	Q9NVV0	291 aa		11.71	□□□□□ -0.53
CACNA1C-222	ENST00000406454	HMSD	A8MTL9	139 aa		11.71	□□□□□ -0.53
CACNA1C-222	ENST00000406454	ADAP1	O75689	374 aa		11.71	□□□□□ -0.53
CACNA1C-222	ENST00000406454	ABHD3	Q8WU67	409 aa		11.71	□□□□□ -0.53
CACNA1C-222	ENST00000406454	RPE	Q96AT9	228 aa		11.71	□□□□□ -0.53
CACNA1C-222	ENST00000406454	ST6GAL2	Q96JF0	529 aa		11.71	□□□□□ -0.53
CACNA1C-222	ENST00000406454	ST6GALNAC2	Q9UJ37	374 aa		11.71	□□□□□ -0.53
CACNA1C-222	ENST00000406454	GGTLC2	Q14390	218 aa		11.71	□□□□□ -0.53
CACNA1C-222	ENST00000406454	CLEC12B	Q2HXU8	276 aa		11.71	□□□□□ -0.53
CACNA1C-222	ENST00000406454	CLEC18B	Q6UXF7	455 aa		11.71	□□□□□ -0.53
CACNA1C-222	ENST00000406454	FCAR	P24071	287 aa		11.71	□□□□□ -0.53
CACNA1C-222	ENST00000406454	KIR2DS2	P43631	304 aa		11.71	□□□□□ -0.53
CACNA1C-222	ENST00000406454	ZNF429	Q86V71	674 aa		11.71	□□□□□ -0.53
CACNA1C-222	ENST00000406454	OR2M7	Q8NG81	312 aa		11.71	□□□□□ -0.53
CACNA1C-222	ENST00000406454	OR10AD1	Q8NGE0	317 aa		11.71	□□□□□ -0.53
CACNA1C-222	ENST00000406454	ZCCHC14	Q8WYQ9	949 aa	Known RBP	11.71	□□□□□ -0.53
CACNA1C-222	ENST00000406454	MOB3A	Q96BX8	217 aa		11.71	□□□□□ -0.53
CACNA1C-222	ENST00000406454	XKRY2	A2RUG3	117 aa		11.71	□□□□□ -0.54
CACNA1C-222	ENST00000406454	C3orf80	F5H4A9	247 aa		11.71	□□□□□ -0.54
CACNA1C-222	ENST00000406454	PRR27	Q6MZM9	219 aa		11.71	□□□□□ -0.54
CACNA1C-222	ENST00000406454	CHRDL1	Q9BU40	450 aa		11.71	□□□□□ -0.54
CACNA1C-222	ENST00000406454	GPR27	Q9NS67	375 aa		11.71	□□□□□ -0.54
CACNA1C-222	ENST00000406454	FGF2	P09038	288 aa		11.71	□□□□□ -0.54
CACNA1C-222	ENST00000406454	FABP9	Q0Z7S8	132 aa		11.71	□□□□□ -0.54
CACNA1C-222	ENST00000406454	ZNF561	Q8N587	486 aa		11.71	□□□□□ -0.54
CACNA1C-222	ENST00000406454	MRPL22	Q9NWU5	206 aa	Known RBP	11.71	□□□□□ -0.54
CACNA1C-222	ENST00000406454	GEMIN2	O14893	280 aa	Known RBP	11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	ZXDA	P98168	799 aa		11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	CTDSP1	Q9GZU7	261 aa		11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	ZNF71	Q9NQZ8	489 aa	Predicted RBP	11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	FBXL17	Q9UF56	701 aa		11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	INHBB	P09529	407 aa		11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	PRSS53	Q2L4Q9	553 aa		11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	FER1L6	Q2WGJ9	1857 aa		11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	PHYHIPL	Q96FC7	376 aa		11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	ZNF107	Q9UII5	783 aa	Predicted RBP	11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	PCM1	Q15154	2024 aa		11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	VSIG8	P0DPA2	414 aa		11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	FOXL2	P58012	376 aa		11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	FFAR4	Q5NUL3	377 aa		11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	GPR137	Q96N19	417 aa		11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	LSM2	Q9Y333	95 aa	Known RBP	11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	MPG	P29372	298 aa		11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	OR6C3	Q9NZP0	311 aa		11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	ZNF320	A2RRD8	509 aa		11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	TRDC	B7Z8K6	153 aa		11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	OR2J3	O76001	311 aa		11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	FBP1	P09467	338 aa		11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	ASAH2B	P0C7U1	165 aa		11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	SPINK2	P20155	84 aa		11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	CD82	P27701	267 aa		11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	ZP4	Q12836	540 aa		11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	PLAC9	Q5JTB6	97 aa		11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	CA5BP1	Q8WTZ4	195 aa		11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	NARFL	Q9H6Q4	476 aa		11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	NCBP2L	A6PVI3	153 aa	Known RBP	11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	PLA2G10	O15496	165 aa		11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	BCL3	P20749	454 aa		11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	FUT5	Q11128	374 aa		11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	ZNF596	Q8TC21	504 aa		11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	LRFN3	Q9BTN0	628 aa		11.7	□□□□□ -0.54
CACNA1C-222	ENST00000406454	LOC102723971	A0A1B0GUV8	181 aa		11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454		B4E171	279 aa		11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	TSPAN7	P41732	249 aa		11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	OR2T6	Q8NHC8	308 aa		11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	WSB1	Q9Y6I7	421 aa		11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	SPTB	P11277	2137 aa		11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	GCM2	O75603	506 aa	Predicted RBP	11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	NTF3	P20783	257 aa		11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	KLF9	Q13886	244 aa	Predicted RBP	11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	ZNF79	Q15937	498 aa		11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	PLPPR5	Q32ZL2	321 aa		11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	ZNF528	Q3MIS6	628 aa		11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	NEIL1	Q96FI4	390 aa	Predicted RBP	11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	SPAAR	A0A1B0GVQ0	90 aa		11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	MAP1LC3B2	A6NCE7	125 aa		11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454		J3QT63	122 aa		11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	APOBEC4	Q8WW27	367 aa	Known RBP	11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	ZNF385A	Q96PM9	386 aa	Known RBP	11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	MAP1LC3B	Q9GZQ8	125 aa		11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	QSER1	Q2KHR3	1735 aa		11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	DXO	O77932	396 aa	Known RBP	11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	NPY1R	P25929	384 aa		11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	CBY1	Q9Y3M2	126 aa		11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	SERTM2	A0A1B0GWG4	89 aa		11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	CSF2RB	P32927	897 aa		11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	CSRP3	P50461	194 aa		11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	TBC1D26	Q86UD7	250 aa		11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	RAB33B	Q9H082	229 aa		11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	KLHDC2	Q9Y2U9	406 aa		11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	SIRT4	Q9Y6E7	314 aa	Predicted RBP	11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	PPIH	O43447	177 aa	Known RBP	11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	LIMS1	P48059	325 aa		11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	TINAG	Q9UJW2	476 aa		11.69	□□□□□ -0.54
CACNA1C-222	ENST00000406454	CDC34	P49427	236 aa	Predicted RBP	11.68	□□□□□ -0.54
CACNA1C-222	ENST00000406454	TAS2R60	P59551	318 aa		11.68	□□□□□ -0.54
CACNA1C-222	ENST00000406454	CD300C	Q08708	224 aa		11.68	□□□□□ -0.54
CACNA1C-222	ENST00000406454	ETV3L	Q6ZN32	361 aa		11.68	□□□□□ -0.54
CACNA1C-222	ENST00000406454	CHST5	Q9GZS9	411 aa		11.68	□□□□□ -0.54
CACNA1C-222	ENST00000406454	CDIPT	O14735	213 aa		11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms