RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 MELTFP08582 738 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 CD200P41217 278 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 DAZAP2Q15038 168 aaPredicted RBP3.13□□□□□ -1.91
RTN4-208ENST00000404909 CARTPTQ16568 116 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 STEAP1BQ6NZ63 245 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 FIP1L1Q6UN15 594 aaKnown RBP3.13□□□□□ -1.91
RTN4-208ENST00000404909 PLET1Q6UQ28 207 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 MEX3BQ6ZN04 569 aaKnown RBP3.13□□□□□ -1.91
RTN4-208ENST00000404909 TGIF2LYQ8IUE0 185 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 CELF2-AS1Q8N7Q2 184 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 SUMF2Q8NBJ7 301 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 POC1AQ8NBT0 407 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 DEFB108BQ8NET1 73 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 OR56B4Q8NH76 319 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 ST8SIA4Q92187 359 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 CCL17Q92583 94 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 FBXW5Q969U6 566 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 DHRS9Q9BPW9 319 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 NUDT16L1Q9BRJ7 211 aaKnown RBP3.13□□□□□ -1.91
RTN4-208ENST00000404909 CACNG6Q9BXT2 260 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 TINAGL1Q9GZM7 467 aaPredicted RBP3.13□□□□□ -1.91
RTN4-208ENST00000404909 CHST6Q9GZX3 395 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 GCM1Q9NP62 436 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 TAS2R8Q9NYW2 309 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 IL19Q9UHD0 177 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 PLEKHA6Q9Y2H5 1048 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 DOPEY2Q9Y3R5 2298 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 TRAV6A0A075B6T7 132 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 B9A039 149 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 MCRIP1C9JLW8 97 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 RAB3DO95716 219 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 PTBP3O95758 552 aaKnown RBP3.13□□□□□ -1.91
RTN4-208ENST00000404909 OR2H2O95918 312 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 CYB5R3P00387 301 aaPredicted RBP3.13□□□□□ -1.91
RTN4-208ENST00000404909 PMP2P02689 132 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 AKAIN1P0CW23 69 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 IRF2P14316 349 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 AMY2BP19961 511 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 HRH1P35367 487 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 FAUP35544 74 aaKnown RBP3.13□□□□□ -1.91
RTN4-208ENST00000404909 PMELP40967 661 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 TAS2R19P59542 299 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 ERVK11-1P61568 191 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 SNRPD2P62316 118 aaKnown RBP3.13□□□□□ -1.91
RTN4-208ENST00000404909 DYRK1AQ13627 763 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 ARL6IP1Q15041 203 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 PNLIPRP3Q17RR3 467 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 SMIM21Q3B7S5 101 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 SCGB2B2Q4G0G5 96 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 PAN3Q58A45 887 aaKnown RBP3.13□□□□□ -1.91
RTN4-208ENST00000404909 RSBN1Q5VWQ0 802 aaPredicted RBP3.13□□□□□ -1.91
RTN4-208ENST00000404909 ZNF782Q6ZMW2 699 aaPredicted RBP3.13□□□□□ -1.91
RTN4-208ENST00000404909 ACP7Q6ZNF0 438 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 Q8NFD4 153 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 OR4C16Q8NGL9 310 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 DPCDQ9BVM2 203 aaPredicted RBP3.13□□□□□ -1.91
RTN4-208ENST00000404909 TLNRD1Q9H1K6 362 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 PPA2Q9H2U2 334 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 MS4A5Q9H3V2 200 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 DCAF16Q9NXF7 216 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 HSF4Q9ULV5 492 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 TRAV24A0A0B4J272 114 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 A0A1B0GWJ7 208 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 A1L4Q6 167 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 PRSS44E7EML9 344 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 SH2D1BO14796 132 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 HAND1O96004 215 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 AMY2AP04746 511 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 EGR1P18146 543 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 TNFRSF1AP19438 455 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 SLC6A1P30531 599 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 GABRA2P47869 451 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 CTAG1AP78358 180 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 ATXN7L3Q14CW9 347 aaPredicted RBP3.12□□□□□ -1.91
RTN4-208ENST00000404909 MPV17LQ2QL34 196 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 MST1LQ2TV78 715 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 NHLRC3Q5JS37 347 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 Q6ZNX1 250 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 DNM1P46Q6ZS02 220 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 GCSAMQ8N6F7 178 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 ASCC1Q8N9N2 400 aaKnown RBP3.12□□□□□ -1.91
RTN4-208ENST00000404909 MINDY2Q8NBR6 621 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 BEST4Q8NFU0 473 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 OR51S1Q8NGJ8 323 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 OR4K15Q8NH41 348 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 GIMAP1Q8WWP7 306 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 BEX2Q9BXY8 128 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 EGLN1Q9GZT9 426 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 DPAGT1Q9H3H5 408 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 UBTD1Q9HAC8 227 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 BEX1Q9HBH7 125 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 NUDT15Q9NV35 164 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 ETAA1Q9NY74 926 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 GLS2Q9UI32 602 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 LAMP3Q9UQV4 416 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 A0A1W2PPR1 153 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 MEX3AA1L020 520 aaKnown RBP3.12□□□□□ -1.91
RTN4-208ENST00000404909 FAM90A10PA6NDY2 464 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 FAM90A18PA6NE21 464 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 FAM90A16PA6NEW6 464 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms