RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 MPV17P39210 176 aa16.52■□□□□ 0.23
PDLIM2-204ENST00000397760 TAGLNQ01995 201 aaKnown RBP16.52■□□□□ 0.23
PDLIM2-204ENST00000397760 PNLIPRP3Q17RR3 467 aa16.52■□□□□ 0.23
PDLIM2-204ENST00000397760 PLCXD3Q63HM9 321 aa16.52■□□□□ 0.23
PDLIM2-204ENST00000397760 AWAT2Q6E213 333 aa16.52■□□□□ 0.23
PDLIM2-204ENST00000397760 ANGPTL5Q86XS5 388 aa16.52■□□□□ 0.23
PDLIM2-204ENST00000397760 SSC4DQ8WTU2 575 aa16.52■□□□□ 0.23
PDLIM2-204ENST00000397760 NGBQ9NPG2 151 aa16.52■□□□□ 0.23
PDLIM2-204ENST00000397760 GHRLQ9UBU3 117 aa16.52■□□□□ 0.23
PDLIM2-204ENST00000397760 GPR160Q9UJ42 338 aa16.52■□□□□ 0.23
PDLIM2-204ENST00000397760 DPRXA6NFQ7 191 aa16.51■□□□□ 0.23
PDLIM2-204ENST00000397760 ANKRD30BLA7E2S9 258 aa16.51■□□□□ 0.23
PDLIM2-204ENST00000397760 CEACAM18A8MTB9 384 aa16.51■□□□□ 0.23
PDLIM2-204ENST00000397760 ATP6V1G2-DDX39BF2Z307 99 aa16.51■□□□□ 0.23
PDLIM2-204ENST00000397760 DUS4LO95620 317 aaKnown RBP16.51■□□□□ 0.23
PDLIM2-204ENST00000397760 FCER2P06734 321 aa16.51■□□□□ 0.23
PDLIM2-204ENST00000397760 SELEP16581 610 aa16.51■□□□□ 0.23
PDLIM2-204ENST00000397760 CBX5P45973 191 aa16.51■□□□□ 0.23
PDLIM2-204ENST00000397760 PSG7Q13046 419 aa16.51■□□□□ 0.23
PDLIM2-204ENST00000397760 PRDX4Q13162 271 aa16.51■□□□□ 0.23
PDLIM2-204ENST00000397760 KISS1Q15726 138 aa16.51■□□□□ 0.23
PDLIM2-204ENST00000397760 ZNF718Q3SXZ3 478 aa16.51■□□□□ 0.23
PDLIM2-204ENST00000397760 OR4S1Q8NGB4 309 aa16.51■□□□□ 0.23
PDLIM2-204ENST00000397760 LINC01560Q8TB33 94 aa16.51■□□□□ 0.23
PDLIM2-204ENST00000397760 TECTBQ96PL2 329 aa16.51■□□□□ 0.23
PDLIM2-204ENST00000397760 GPER1Q99527 375 aa16.51■□□□□ 0.23
PDLIM2-204ENST00000397760 MYEF2Q9P2K5 600 aaKnown RBP16.51■□□□□ 0.23
PDLIM2-204ENST00000397760 SLC7A11Q9UPY5 501 aa16.51■□□□□ 0.23
PDLIM2-204ENST00000397760 LOC105371267A0A1B0GV96 52 aa16.5■□□□□ 0.23
PDLIM2-204ENST00000397760 FAM230AA0A1W2PPH8 454 aa16.5■□□□□ 0.23
PDLIM2-204ENST00000397760 LILRA1O75019 489 aa16.5■□□□□ 0.23
PDLIM2-204ENST00000397760 C1QL1O75973 258 aa16.5■□□□□ 0.23
PDLIM2-204ENST00000397760 IFNA6P05013 189 aa16.5■□□□□ 0.23
PDLIM2-204ENST00000397760 AGAP20933 346 aa16.5■□□□□ 0.23
PDLIM2-204ENST00000397760 GCH1P30793 250 aa16.5■□□□□ 0.23
PDLIM2-204ENST00000397760 FABP6P51161 128 aa16.5■□□□□ 0.23
PDLIM2-204ENST00000397760 VAX1Q5SQQ9 334 aa16.5■□□□□ 0.23
PDLIM2-204ENST00000397760 ARRDC1Q8N5I2 433 aa16.5■□□□□ 0.23
PDLIM2-204ENST00000397760 OR1S1Q8NH92 325 aa16.5■□□□□ 0.23
PDLIM2-204ENST00000397760 ITLN2Q8WWU7 325 aaPredicted RBP16.5■□□□□ 0.23
PDLIM2-204ENST00000397760 ST8SIA2Q92186 375 aa16.5■□□□□ 0.23
PDLIM2-204ENST00000397760 MRGPRFQ96AM1 343 aa16.5■□□□□ 0.23
PDLIM2-204ENST00000397760 CXorf58Q96LI9 332 aa16.5■□□□□ 0.23
PDLIM2-204ENST00000397760 LPAR5Q9H1C0 372 aa16.5■□□□□ 0.23
PDLIM2-204ENST00000397760 FZR1Q9UM11 496 aa16.5■□□□□ 0.23
PDLIM2-204ENST00000397760 MRPS28Q9Y2Q9 187 aaKnown RBP16.5■□□□□ 0.23
PDLIM2-204ENST00000397760 RELNP78509 3460 aa16.5■□□□□ 0.23
PDLIM2-204ENST00000397760 EPG5Q9HCE0 2579 aa16.5■□□□□ 0.23
PDLIM2-204ENST00000397760 KANTRA0A1W2PQU2 76 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 FUT6P51993 359 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 MTCP1P56278 107 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 NKX6-1P78426 367 aaPredicted RBP16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 IL13RA1P78552 427 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 TFF3Q07654 80 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 MBNL2Q5VZF2 373 aaKnown RBP16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 ACOT7LQ6ZUV0 252 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 HOGA1Q86XE5 327 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 BVESQ8NE79 360 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 BORCS8Q96FH0 119 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 PDCD10Q9BUL8 212 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 CST11Q9H112 138 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 IQCF6A8MYZ5 107 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 BCL2L11O43521 198 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 CLDN14O95500 239 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 HRH1P35367 487 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 GLRXP35754 106 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 ALDH3B1P43353 468 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 BSPH1Q075Z2 132 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 PPP1R1AQ13522 171 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 NKPD1Q17RQ9 610 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 ALKBH6Q3KRA9 238 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 CRIP3Q6Q6R5 217 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 ZDHHC23Q8IYP9 409 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 ZNF808Q8N4W9 903 aaPredicted RBP16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 PNLDC1Q8NA58 520 aaKnown RBP16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 NUDCD2Q8WVJ2 157 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 C1orf147Q96MC9 270 aaPredicted RBP16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 SCGB3A2Q96PL1 93 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 OCSTAMPQ9BR26 566 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 SELENOIQ9C0D9 397 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 SHARPINQ9H0F6 387 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 RASL12Q9NYN1 266 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 PURGQ9UJV8 347 aaKnown RBP16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 KCNK7Q9Y2U2 307 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 MPC1Q9Y5U8 109 aa16.49■□□□□ 0.23
PDLIM2-204ENST00000397760 A0A0B4J2A0 478 aa16.48■□□□□ 0.23
PDLIM2-204ENST00000397760 ABCD4O14678 606 aa16.48■□□□□ 0.23
PDLIM2-204ENST00000397760 SSX5O60225 188 aa16.48■□□□□ 0.23
PDLIM2-204ENST00000397760 HIST1H1DP16402 221 aaKnown RBP16.48■□□□□ 0.23
PDLIM2-204ENST00000397760 OR3A4PP47883 348 aa16.48■□□□□ 0.23
PDLIM2-204ENST00000397760 RBP2P50120 134 aa16.48■□□□□ 0.23
PDLIM2-204ENST00000397760 CYCSP99999 105 aaKnown RBP16.48■□□□□ 0.23
PDLIM2-204ENST00000397760 GLIPR1L1Q6UWM5 242 aa16.48■□□□□ 0.23
PDLIM2-204ENST00000397760 LHFPL2Q6ZUX7 228 aa16.48■□□□□ 0.23
PDLIM2-204ENST00000397760 SPERTQ8NA61 448 aa16.48■□□□□ 0.23
PDLIM2-204ENST00000397760 OR56B1Q8NGI3 324 aa16.48■□□□□ 0.23
PDLIM2-204ENST00000397760 FBXW5Q969U6 566 aa16.48■□□□□ 0.23
PDLIM2-204ENST00000397760 HIST1H2AAQ96QV6 131 aa16.48■□□□□ 0.23
PDLIM2-204ENST00000397760 URM1Q9BTM9 101 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms