RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 LAMTOR1Q6IAA8 161 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 LRRC69Q6ZNQ3 347 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 ATOH1Q92858 354 aaPredicted RBP5.05□□□□□ -1.6
PTPRD-206ENST00000397617 LSM10Q969L4 123 aaKnown RBP5.05□□□□□ -1.6
PTPRD-206ENST00000397617 PLEKHJ1Q9NW61 149 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 FOXJ2Q9P0K8 574 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 RAMP1O60894 148 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 HPXP02790 462 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 SNU13P55769 128 aaKnown RBP5.05□□□□□ -1.6
PTPRD-206ENST00000397617 LGALSLQ3ZCW2 172 aaPredicted RBP5.05□□□□□ -1.6
PTPRD-206ENST00000397617 CPEB3Q8NE35 698 aaKnown RBP5.05□□□□□ -1.6
PTPRD-206ENST00000397617 OR5P3Q8WZ94 311 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 HEXA-AS1Q9H8Q6 139 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 MSRB2Q9Y3D2 182 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 OR5H14A6NHG9 310 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 GPR31O00270 319 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 ACKR3P25106 362 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 INSL4Q14641 139 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 IGFBP7Q16270 282 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 ZNF774Q6NX45 483 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 BHLHE23Q8NDY6 225 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 SAV1Q9H4B6 383 aaPredicted RBP5.05□□□□□ -1.6
PTPRD-206ENST00000397617 ST3GAL6Q9Y274 331 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 B8ZZF3 427 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 IGHV3-13P01766 116 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 PGA5P0DJD9 388 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 CD34P28906 385 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 HTD2P86397 168 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 AADACL3Q5VUY0 350 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 ZNF71Q9NQZ8 489 aaPredicted RBP5.05□□□□□ -1.6
PTPRD-206ENST00000397617 ZNF319Q9P2F9 582 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 SRRM5B3KS81 715 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 E5RGE8 158 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 SEC11BP0C7V7 166 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 ZNF250P15622 560 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 FAM58AQ8N1B3 248 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 FBXL14Q8N1E6 418 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 NSG2Q9Y328 171 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 HCFC1P51610 2035 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 CRYAAP02489 173 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 ZNF14P17017 642 aaPredicted RBP5.05□□□□□ -1.6
PTPRD-206ENST00000397617 CEBPGP53567 150 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 SORDQ00796 357 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 TRAPPC6BQ86SZ2 158 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 OR52M1Q8NGK5 317 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 FAM71F1Q96KD3 344 aaPredicted RBP5.05□□□□□ -1.6
PTPRD-206ENST00000397617 KCNIP2Q9NS61 270 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 DLL3Q9NYJ7 618 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 WIPI2Q9Y4P8 454 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 CD55P08174 381 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 PLAC9Q5JTB6 97 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 MUC20Q8N307 709 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-206ENST00000397617 POC1AQ8NBT0 407 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 TANC2Q9HCD6 1990 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 A0A1W2PNU3 283 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-206ENST00000397617 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-206ENST00000397617 TPT1P13693 172 aaKnown RBP5.04□□□□□ -1.6
PTPRD-206ENST00000397617 HERV-K104P61576 105 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 ZNF266Q14584 549 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 HMGN3Q15651 99 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 MICBQ29980 383 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 TMEM249Q2WGJ8 235 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 SFRP5Q5T4F7 317 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 SLC35E4Q6ICL7 350 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 C11orf87Q6NUJ2 197 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 FAM71F2Q6NXP2 309 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 CCDC28AQ8IWP9 274 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 ZNF611Q8N823 705 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 PARD6GQ9BYG4 376 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-206ENST00000397617 G3V3Q6 166 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 TMIGD3P0DMS9 266 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-206ENST00000397617 TNFRSF1AP19438 455 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 OPCMLQ14982 345 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 DPPA3Q6W0C5 159 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 PDZD9Q8IXQ8 264 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 SHISA5Q8N114 240 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 RTN4IP1Q8WWV3 396 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-206ENST00000397617 MUCL1Q96DR8 90 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 C5orf42Q9H799 3197 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 H0Y980 276 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 BET1O15155 118 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 MUC1P15941 1255 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-206ENST00000397617 RPS27P42677 84 aaKnown RBP5.04□□□□□ -1.6
PTPRD-206ENST00000397617 ZNF81P51508 661 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 CLDN12P56749 244 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 NKPD1Q17RQ9 610 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 BAP18Q8IXM2 172 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 OR2I1PQ8NGU4 316 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 OR51F2Q8NH61 342 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 CNTNAP3BQ96NU0 1288 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 CIB3Q96Q77 187 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-206ENST00000397617 RAB40CQ96S21 281 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 NPAS1Q99742 590 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 PECRQ9BY49 303 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 CNTNAP3Q9BZ76 1288 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 ARV1Q9H2C2 271 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 HES4Q9HCC6 221 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 STARD10Q9Y365 291 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 PRELID3BQ9Y3B1 194 aa5.04□□□□□ -1.6
PTPRD-206ENST00000397617 BORCS7-ASMTA0A0B4J1R7 106 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms