RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 MUC20Q8N307 709 aaPredicted RBP9.25□□□□□ -0.93
COL4A4-201ENST00000396625 SPICQ8N5J4 248 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 ISOC2Q96AB3 205 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 ABHD14AQ9BUJ0 271 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 SLC17A2O00624 439 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 BTF3P20290 206 aaKnown RBP9.25□□□□□ -0.93
COL4A4-201ENST00000396625 ELFN2Q5R3F8 820 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 FOXB2Q5VYV0 432 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 DEFB127Q9H1M4 99 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 TECRQ9NZ01 308 aaKnown RBP9.25□□□□□ -0.93
COL4A4-201ENST00000396625 C9orf170A2RU37 121 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 DUSP8Q13202 625 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 AFMIDQ63HM1 303 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 LYG1Q8N1E2 194 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 GBGT1Q8N5D6 347 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 BCL7CQ8WUZ0 217 aaPredicted RBP9.25□□□□□ -0.93
COL4A4-201ENST00000396625 ARHGAP5-AS1Q96IT6 56 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 HSF4Q9ULV5 492 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 C3orf85A0A1B0GTC6 90 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 CLDN15P56746 228 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 TMEM136Q6ZRR5 245 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 SPAG8Q99932 426 aaPredicted RBP9.25□□□□□ -0.93
COL4A4-201ENST00000396625 SIRT7Q9NRC8 400 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 TMEM167BQ9NRX6 74 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 RAXQ9Y2V3 346 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 A0A1W2PPC4 97 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 FIGNL2A6NMB9 653 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 GSTZ1O43708 216 aaPredicted RBP9.25□□□□□ -0.93
COL4A4-201ENST00000396625 TSPAN12O95859 305 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 CA3P07451 260 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 GPX2P18283 190 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 SCD5Q86SK9 330 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 OR4C13Q8NGP0 309 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 PSG11Q9UQ72 335 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 ZNF236Q9UL36 1845 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 PLCH1Q4KWH8 1693 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 SYNGR2O43760 224 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 FAM27D1Q5T7N8 215 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 DLEU7Q6UYE1 221 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 OR1N1Q8NGS0 311 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 PP6455Q8WZ26 134 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 SLC25A33Q9BSK2 321 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 DOCK4Q8N1I0 1966 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 PCP4P48539 62 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 NOXO1Q8NFA2 376 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 SLC46A2Q9BY10 475 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 OR2W1Q9Y3N9 320 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 LRP6O75581 1613 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 PLCE1Q9P212 2302 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 A0A1W2PNR3 127 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 CCR2P41597 374 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 PRRX1P54821 245 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 FAM109BQ6ICB4 259 aaPredicted RBP9.24□□□□□ -0.93
COL4A4-201ENST00000396625 FBXL17Q9UF56 701 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 AUP1Q9Y679 476 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 THBS4P35443 961 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 LGALS7P47929 136 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 FAM209BQ5JX69 171 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 PTX4Q96A99 478 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 DOK1Q99704 481 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 HAND1O96004 215 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 TIMP1P01033 207 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 TNFRSF1AP19438 455 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 LPAR6P43657 344 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 BEND2Q8NDZ0 799 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 PLPPR2Q96GM1 343 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 LINC00052Q96N35 136 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 ALKBH3Q96Q83 286 aaPredicted RBP9.24□□□□□ -0.93
COL4A4-201ENST00000396625 LEUTXA8MZ59 168 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 INHBBP09529 407 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 OR1F12Q8NHA8 337 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 SMIM14Q96QK8 99 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 BTAF1O14981 1849 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 NDUFB3O43676 98 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 FOXO1Q12778 655 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 SLC36A1Q7Z2H8 476 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 COL25A1Q9BXS0 654 aaPredicted RBP9.24□□□□□ -0.93
COL4A4-201ENST00000396625 IL13RA2Q14627 380 aa9.24□□□□□ -0.93
COL4A4-201ENST00000396625 EMDP50402 254 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 HTRA3P83110 453 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 ANKRD55Q3KP44 614 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 LEMD1Q68G75 181 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 FBXL6Q8N531 539 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 FAM169BQ8N8A8 192 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 KIR3DX1Q9H7L2 352 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 KIR3DL2P43630 455 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 ZNF391Q9UJN7 358 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 VSIG4Q9Y279 399 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 LRP12Q9Y561 859 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 SPRY3O43610 288 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 GAB4Q2WGN9 574 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 SDF2Q99470 211 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 TMEM38BQ9NVV0 291 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 HS3ST2Q9Y278 367 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 TSC2P49815 1807 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 MRPS21P82921 87 aaKnown RBP9.23□□□□□ -0.93
COL4A4-201ENST00000396625 LIAT1Q6ZQX7 453 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 OR2C3Q8N628 320 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 SLC25A19Q9HC21 320 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms