RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 ADAM20O43506 726 aa13.77□□□□□ -0.2
GNE-202ENST00000396594 NME2P1O60361 137 aa13.77□□□□□ -0.2
GNE-202ENST00000396594 OR13C7P0DN81 318 aa13.77□□□□□ -0.2
GNE-202ENST00000396594 GZMMP51124 257 aa13.77□□□□□ -0.2
GNE-202ENST00000396594 OR8U1Q8NH10 309 aa13.77□□□□□ -0.2
GNE-202ENST00000396594 TMEM171Q8WVE6 324 aa13.77□□□□□ -0.2
GNE-202ENST00000396594 MOGAT1Q96PD6 335 aa13.77□□□□□ -0.2
GNE-202ENST00000396594 DBX1A6NMT0 343 aa13.77□□□□□ -0.2
GNE-202ENST00000396594 GOSR1O95249 250 aa13.77□□□□□ -0.2
GNE-202ENST00000396594 ZP3P21754 424 aa13.77□□□□□ -0.2
GNE-202ENST00000396594 CABLES2Q9BTV7 478 aa13.77□□□□□ -0.2
GNE-202ENST00000396594 TTTY12Q9BZ98 90 aa13.77□□□□□ -0.2
GNE-202ENST00000396594 RNF167Q9H6Y7 350 aa13.77□□□□□ -0.2
GNE-202ENST00000396594 CELA2BP08218 269 aaPredicted RBP13.77□□□□□ -0.21
GNE-202ENST00000396594 SLC25A4P12235 298 aa13.77□□□□□ -0.21
GNE-202ENST00000396594 ZNF816Q0VGE8 651 aaPredicted RBP13.77□□□□□ -0.21
GNE-202ENST00000396594 DHRS2Q13268 280 aa13.77□□□□□ -0.21
GNE-202ENST00000396594 NRN1LQ496H8 165 aa13.77□□□□□ -0.21
GNE-202ENST00000396594 TMEM65Q6PI78 240 aa13.77□□□□□ -0.21
GNE-202ENST00000396594 STPG2Q8N412 459 aa13.77□□□□□ -0.21
GNE-202ENST00000396594 ZNF519Q8TB69 540 aa13.77□□□□□ -0.21
GNE-202ENST00000396594 GDF15Q99988 308 aa13.77□□□□□ -0.21
GNE-202ENST00000396594 SFXN3Q9BWM7 321 aa13.77□□□□□ -0.21
GNE-202ENST00000396594 LOC285556D6RIA3 1793 aa13.77□□□□□ -0.21
GNE-202ENST00000396594 AQP7O14520 342 aa13.77□□□□□ -0.21
GNE-202ENST00000396594 CFDP00746 253 aaPredicted RBP13.77□□□□□ -0.21
GNE-202ENST00000396594 PEBP1P30086 187 aaKnown RBP13.77□□□□□ -0.21
GNE-202ENST00000396594 MC5RP33032 325 aa13.77□□□□□ -0.21
GNE-202ENST00000396594 SRP14P37108 136 aaKnown RBP13.77□□□□□ -0.21
GNE-202ENST00000396594 RFC3P40938 356 aa13.77□□□□□ -0.21
GNE-202ENST00000396594 CD226Q15762 336 aa13.77□□□□□ -0.21
GNE-202ENST00000396594 LCN15Q6UWW0 184 aa13.77□□□□□ -0.21
GNE-202ENST00000396594 THSD4Q6ZMP0 1018 aa13.77□□□□□ -0.21
GNE-202ENST00000396594 SPACA5Q96QH8 159 aa13.77□□□□□ -0.21
GNE-202ENST00000396594 TRAF4Q9BUZ4 470 aaPredicted RBP13.77□□□□□ -0.21
GNE-202ENST00000396594 CTDSP1Q9GZU7 261 aa13.77□□□□□ -0.21
GNE-202ENST00000396594 RNF212Q495C1 297 aa13.77□□□□□ -0.21
GNE-202ENST00000396594 ZFP62Q8NB50 900 aaPredicted RBP13.77□□□□□ -0.21
GNE-202ENST00000396594 FAM90A27PA6NNH2 459 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 K7ESF4 209 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 ASAH2BP0C7U1 165 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 SIGLECL1Q8N7X8 197 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 OR8D4Q8NGM9 314 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 C14orf79Q96F83 325 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 OR1A1Q9P1Q5 309 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 SPINT1O43278 529 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 ISG15P05161 165 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 ROM1Q03395 351 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 CEBPEQ15744 281 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 CBLN3Q6UW01 205 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 ZNF66Q6ZN08 573 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 ETV3LQ6ZN32 361 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 SAP25Q8TEE9 199 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 KLK11Q9UBX7 282 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 PSG11Q9UQ72 335 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 FCGR3BO75015 233 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 HLA-GP17693 338 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 CD80P33681 288 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 EXOSC2Q13868 293 aaKnown RBP13.76□□□□□ -0.21
GNE-202ENST00000396594 PTDSS2Q9BVG9 487 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 ZNF835Q9Y2P0 537 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 SCN1AP35498 2009 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 PARP14Q460N5 1801 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 AKR7A2O43488 359 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 NQO2P16083 231 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 SLC6A1P30531 599 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 HOXA6P31267 233 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 TPPP2P59282 170 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 C11orf91Q3C1V1 193 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 TINAGL1Q9GZM7 467 aaPredicted RBP13.76□□□□□ -0.21
GNE-202ENST00000396594 OR2D2Q9H210 308 aa13.76□□□□□ -0.21
GNE-202ENST00000396594 SEC14L6B5MCN3 397 aa13.75□□□□□ -0.21
GNE-202ENST00000396594 GREM1O60565 184 aa13.75□□□□□ -0.21
GNE-202ENST00000396594 RPS4Y1P22090 263 aaKnown RBP13.75□□□□□ -0.21
GNE-202ENST00000396594 PAX6P26367 422 aa13.75□□□□□ -0.21
GNE-202ENST00000396594 MAGEA5P43359 124 aa13.75□□□□□ -0.21
GNE-202ENST00000396594 SPCS3P61009 180 aa13.75□□□□□ -0.21
GNE-202ENST00000396594 OR5I1Q13606 314 aa13.75□□□□□ -0.21
GNE-202ENST00000396594 ACSM6Q6P461 480 aa13.75□□□□□ -0.21
GNE-202ENST00000396594 ANAPC16Q96DE5 110 aa13.75□□□□□ -0.21
GNE-202ENST00000396594 RASL11BQ9BPW5 248 aa13.75□□□□□ -0.21
GNE-202ENST00000396594 NCBP2LA6PVI3 153 aaKnown RBP13.75□□□□□ -0.21
GNE-202ENST00000396594 SMIM10L1P0DMW3 83 aa13.75□□□□□ -0.21
GNE-202ENST00000396594 FCARP24071 287 aa13.75□□□□□ -0.21
GNE-202ENST00000396594 FAM214BQ7L5A3 538 aa13.75□□□□□ -0.21
GNE-202ENST00000396594 TUSC5Q8IXB3 177 aa13.75□□□□□ -0.21
GNE-202ENST00000396594 SMIM10Q96HG1 83 aa13.75□□□□□ -0.21
GNE-202ENST00000396594 BRWD3Q6RI45 1802 aa13.75□□□□□ -0.21
GNE-202ENST00000396594 CDC42EP2O14613 210 aa13.75□□□□□ -0.21
GNE-202ENST00000396594 OPRK1P41145 380 aa13.75□□□□□ -0.21
GNE-202ENST00000396594 WDR89Q96FK6 387 aaPredicted RBP13.75□□□□□ -0.21
GNE-202ENST00000396594 LINC00470Q9BZP3 86 aa13.75□□□□□ -0.21
GNE-202ENST00000396594 OR2W1Q9Y3N9 320 aa13.75□□□□□ -0.21
GNE-202ENST00000396594 OR3A4PP47883 348 aa13.75□□□□□ -0.21
GNE-202ENST00000396594 SPATA46Q5T0L3 261 aa13.75□□□□□ -0.21
GNE-202ENST00000396594 TEX261Q6UWH6 196 aa13.75□□□□□ -0.21
GNE-202ENST00000396594 ING1Q9UK53 422 aaPredicted RBP13.75□□□□□ -0.21
GNE-202ENST00000396594 MRPS18CQ9Y3D5 142 aaKnown RBP13.75□□□□□ -0.21
GNE-202ENST00000396594 U3KQ87 197 aa13.75□□□□□ -0.21
GNE-202ENST00000396594 UBE2L5PA0A1B0GUS4 154 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms