RNA–Protein interactions for RNA: ENST00000396334.7

MYD88-201, Transcript of MYD88, innate immune signal transduction adaptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MYD88, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYD88-201ENST00000396334 NECAP2Q9NVZ3 263 aa12.37□□□□□ -0.43
MYD88-201ENST00000396334 A0A087WWC5 75 aa12.36□□□□□ -0.43
MYD88-201ENST00000396334 LOC102725191A0A1B0GVB3 256 aa12.36□□□□□ -0.43
MYD88-201ENST00000396334 ZNF705GA8MUZ8 300 aaPredicted RBP12.36□□□□□ -0.43
MYD88-201ENST00000396334 MBP02144 154 aa12.36□□□□□ -0.43
MYD88-201ENST00000396334 ZNF25P17030 456 aaPredicted RBP12.36□□□□□ -0.43
MYD88-201ENST00000396334 FGF7P21781 194 aa12.36□□□□□ -0.43
MYD88-201ENST00000396334 DTYMKP23919 212 aa12.36□□□□□ -0.43
MYD88-201ENST00000396334 DUSP1P28562 367 aa12.36□□□□□ -0.43
MYD88-201ENST00000396334 AFF3P51826 1226 aaKnown RBP12.36□□□□□ -0.43
MYD88-201ENST00000396334 FOXL2P58012 376 aa12.36□□□□□ -0.43
MYD88-201ENST00000396334 CFHR1Q03591 330 aa12.36□□□□□ -0.43
MYD88-201ENST00000396334 RSPO1Q2MKA7 263 aaPredicted RBP12.36□□□□□ -0.43
MYD88-201ENST00000396334 OR4D5Q8NGN0 318 aa12.36□□□□□ -0.43
MYD88-201ENST00000396334 SNIP1Q8TAD8 396 aaKnown RBP12.36□□□□□ -0.43
MYD88-201ENST00000396334 RTN4IP1Q8WWV3 396 aaPredicted RBP12.36□□□□□ -0.43
MYD88-201ENST00000396334 C10orf35Q96D05 121 aa12.36□□□□□ -0.43
MYD88-201ENST00000396334 CLEC1BQ9P126 229 aa12.36□□□□□ -0.43
MYD88-201ENST00000396334 AK3Q9UIJ7 227 aa12.36□□□□□ -0.43
MYD88-201ENST00000396334 LIPGQ9Y5X9 500 aa12.36□□□□□ -0.43
MYD88-201ENST00000396334 SHISA7A6NL88 538 aa12.36□□□□□ -0.43
MYD88-201ENST00000396334 MARCH11A6NNE9 402 aa12.36□□□□□ -0.43
MYD88-201ENST00000396334 SRP19P09132 144 aaKnown RBP12.36□□□□□ -0.43
MYD88-201ENST00000396334 GABRR1P24046 479 aa12.36□□□□□ -0.43
MYD88-201ENST00000396334 GLIPR1P48060 266 aa12.36□□□□□ -0.43
MYD88-201ENST00000396334 FAM210BQ96KR6 192 aa12.36□□□□□ -0.43
MYD88-201ENST00000396334 ANGPTL4Q9BY76 406 aa12.36□□□□□ -0.43
MYD88-201ENST00000396334 FAM86C1Q9NVL1 165 aa12.36□□□□□ -0.43
MYD88-201ENST00000396334 SEMA5BQ9P283 1151 aa12.36□□□□□ -0.43
MYD88-201ENST00000396334 TCFL5Q9UL49 500 aa12.36□□□□□ -0.43
MYD88-201ENST00000396334 OTX1P32242 354 aaPredicted RBP12.36□□□□□ -0.43
MYD88-201ENST00000396334 HIST1H3AP68431 136 aa12.36□□□□□ -0.43
MYD88-201ENST00000396334 SPSB3Q6PJ21 355 aa12.36□□□□□ -0.43
MYD88-201ENST00000396334 SHISA6Q6ZSJ9 500 aa12.36□□□□□ -0.43
MYD88-201ENST00000396334 FOXL2NBQ6ZUU3 175 aa12.36□□□□□ -0.43
MYD88-201ENST00000396334 PIGTQ969N2 578 aa12.36□□□□□ -0.43
MYD88-201ENST00000396334 NOL4LQ96MY1 436 aaPredicted RBP12.36□□□□□ -0.43
MYD88-201ENST00000396334 ZNF160Q9HCG1 818 aa12.36□□□□□ -0.43
MYD88-201ENST00000396334 SEC16AO15027 2179 aa12.35□□□□□ -0.43
MYD88-201ENST00000396334 NCOA6Q14686 2063 aaPredicted RBP12.35□□□□□ -0.43
MYD88-201ENST00000396334 MYO7BQ6PIF6 2116 aa12.35□□□□□ -0.43
MYD88-201ENST00000396334 A0A1W2PNR3 127 aa12.35□□□□□ -0.43
MYD88-201ENST00000396334 ST8SIA3O43173 380 aa12.35□□□□□ -0.43
MYD88-201ENST00000396334 AMBPP02760 352 aa12.35□□□□□ -0.43
MYD88-201ENST00000396334 ENDOGQ14249 297 aaKnown RBP12.35□□□□□ -0.43
MYD88-201ENST00000396334 TMEM176BQ3YBM2 270 aaPredicted RBP12.35□□□□□ -0.43
MYD88-201ENST00000396334 BEND2Q8NDZ0 799 aa12.35□□□□□ -0.43
MYD88-201ENST00000396334 REEP6Q96HR9 211 aa12.35□□□□□ -0.43
MYD88-201ENST00000396334 BOD1Q96IK1 185 aa12.35□□□□□ -0.43
MYD88-201ENST00000396334 PIGLQ9Y2B2 252 aa12.35□□□□□ -0.43
MYD88-201ENST00000396334 A0A1W2PR77 199 aa12.35□□□□□ -0.43
MYD88-201ENST00000396334 SCAF4O95104 1147 aaKnown RBP12.35□□□□□ -0.43
MYD88-201ENST00000396334 ARL4DP49703 201 aa12.35□□□□□ -0.43
MYD88-201ENST00000396334 DEFB133Q30KQ1 61 aa12.35□□□□□ -0.43
MYD88-201ENST00000396334 ANKRD37Q7Z713 158 aa12.35□□□□□ -0.43
MYD88-201ENST00000396334 ZFP62Q8NB50 900 aaPredicted RBP12.35□□□□□ -0.43
MYD88-201ENST00000396334 OR13D1Q8NGV5 346 aa12.35□□□□□ -0.43
MYD88-201ENST00000396334 THAP3Q8WTV1 239 aaPredicted RBP12.35□□□□□ -0.43
MYD88-201ENST00000396334 FAAP24Q9BTP7 215 aa12.35□□□□□ -0.43
MYD88-201ENST00000396334 SLC2A9Q9NRM0 540 aa12.35□□□□□ -0.43
MYD88-201ENST00000396334 AQP7P3A6NL99 342 aa12.34□□□□□ -0.43
MYD88-201ENST00000396334 OPN1LWP04000 364 aa12.34□□□□□ -0.43
MYD88-201ENST00000396334 FUT3P21217 361 aa12.34□□□□□ -0.43
MYD88-201ENST00000396334 RRADP55042 308 aa12.34□□□□□ -0.43
MYD88-201ENST00000396334 UCP3P55916 312 aa12.34□□□□□ -0.43
MYD88-201ENST00000396334 OR1D5P58170 312 aa12.34□□□□□ -0.43
MYD88-201ENST00000396334 EWSR1Q01844 656 aaKnown RBP eCLIP12.34□□□□□ -0.43
MYD88-201ENST00000396334 SLC10A1Q14973 349 aa12.34□□□□□ -0.43
MYD88-201ENST00000396334 ABCA11PQ4W5N1 156 aa12.34□□□□□ -0.43
MYD88-201ENST00000396334 TSPO2Q5TGU0 170 aa12.34□□□□□ -0.43
MYD88-201ENST00000396334 FBXW12Q6X9E4 464 aa12.34□□□□□ -0.43
MYD88-201ENST00000396334 LGI3Q8N145 548 aa12.34□□□□□ -0.43
MYD88-201ENST00000396334 C17orf78Q8N4C9 275 aa12.34□□□□□ -0.43
MYD88-201ENST00000396334 ZNF581Q9P0T4 197 aa12.34□□□□□ -0.43
MYD88-201ENST00000396334 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.34□□□□□ -0.43
MYD88-201ENST00000396334 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.34□□□□□ -0.43
MYD88-201ENST00000396334 NKAIN1Q4KMZ8 207 aa12.34□□□□□ -0.43
MYD88-201ENST00000396334 C10orf128Q5T292 105 aa12.34□□□□□ -0.43
MYD88-201ENST00000396334 TOMM40LQ969M1 308 aa12.34□□□□□ -0.43
MYD88-201ENST00000396334 TVP23CQ96ET8 276 aa12.34□□□□□ -0.43
MYD88-201ENST00000396334 ELL3Q9HB65 397 aaPredicted RBP12.34□□□□□ -0.43
MYD88-201ENST00000396334 KLRF1Q9NZS2 232 aa12.34□□□□□ -0.43
MYD88-201ENST00000396334 NXT1Q9UKK6 140 aaKnown RBP12.34□□□□□ -0.43
MYD88-201ENST00000396334 KNL1Q8NG31 2342 aa12.34□□□□□ -0.43
MYD88-201ENST00000396334 RALGAPA1Q6GYQ0 2036 aa12.33□□□□□ -0.44
MYD88-201ENST00000396334 IGHV1OR21-1A0A087WYE8 117 aa12.33□□□□□ -0.44
MYD88-201ENST00000396334 DVL1O14640 695 aa12.33□□□□□ -0.44
MYD88-201ENST00000396334 GLI4P10075 376 aa12.33□□□□□ -0.44
MYD88-201ENST00000396334 MSR1P21757 451 aa12.33□□□□□ -0.44
MYD88-201ENST00000396334 SLC22A25Q6T423 547 aa12.33□□□□□ -0.44
MYD88-201ENST00000396334 ASCL4Q6XD76 172 aa12.33□□□□□ -0.44
MYD88-201ENST00000396334 NABP1Q96AH0 204 aa12.33□□□□□ -0.44
MYD88-201ENST00000396334 ZNF501Q96CX3 271 aaPredicted RBP12.33□□□□□ -0.44
MYD88-201ENST00000396334 ZNF850A8MQ14 1090 aa12.33□□□□□ -0.44
MYD88-201ENST00000396334 ICAM4Q14773 271 aa12.33□□□□□ -0.44
MYD88-201ENST00000396334 GJC3Q8NFK1 279 aa12.33□□□□□ -0.44
MYD88-201ENST00000396334 OR2M3Q8NG83 312 aa12.33□□□□□ -0.44
MYD88-201ENST00000396334 OR10J5Q8NHC4 309 aa12.33□□□□□ -0.44
MYD88-201ENST00000396334 MOB3AQ96BX8 217 aa12.33□□□□□ -0.44
MYD88-201ENST00000396334 SYT3Q9BQG1 590 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms