RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 GABRA1P14867 456 aa15.31■□□□□ 0.04
UBFD1-201ENST00000395878 TRIP6Q15654 476 aaKnown RBP15.31■□□□□ 0.04
UBFD1-201ENST00000395878 OR10AC1Q8NH08 325 aa15.31■□□□□ 0.04
UBFD1-201ENST00000395878 SH2D2AQ9NP31 389 aa15.31■□□□□ 0.04
UBFD1-201ENST00000395878 KIR2DL1P43626 348 aaPredicted RBP15.3■□□□□ 0.04
UBFD1-201ENST00000395878 POLR2GP62487 172 aaKnown RBP eCLIP15.3■□□□□ 0.04
UBFD1-201ENST00000395878 HES3Q5TGS1 186 aa15.3■□□□□ 0.04
UBFD1-201ENST00000395878 SLC25A22Q9H936 323 aa15.3■□□□□ 0.04
UBFD1-201ENST00000395878 LPAR3Q9UBY5 353 aa15.3■□□□□ 0.04
UBFD1-201ENST00000395878 TCRBV16S1A1N1A0A5B0 115 aa15.3■□□□□ 0.04
UBFD1-201ENST00000395878 GZMMP51124 257 aa15.3■□□□□ 0.04
UBFD1-201ENST00000395878 FNDC7Q5VTL7 733 aa15.3■□□□□ 0.04
UBFD1-201ENST00000395878 DHRS7BQ6IAN0 325 aaPredicted RBP15.3■□□□□ 0.04
UBFD1-201ENST00000395878 ZAR1Q86SH2 424 aa15.3■□□□□ 0.04
UBFD1-201ENST00000395878 THYN1Q9P016 225 aa15.3■□□□□ 0.04
UBFD1-201ENST00000395878 SYNGR2O43760 224 aa15.3■□□□□ 0.04
UBFD1-201ENST00000395878 RNF151Q2KHN1 245 aa15.3■□□□□ 0.04
UBFD1-201ENST00000395878 SLC25A42Q86VD7 318 aa15.3■□□□□ 0.04
UBFD1-201ENST00000395878 RNF133Q8WVZ7 376 aa15.3■□□□□ 0.04
UBFD1-201ENST00000395878 RNF2Q99496 336 aa15.3■□□□□ 0.04
UBFD1-201ENST00000395878 CES1P1Q9UKY3 287 aa15.3■□□□□ 0.04
UBFD1-201ENST00000395878 HLA-GP17693 338 aa15.3■□□□□ 0.04
UBFD1-201ENST00000395878 CEACAM3P40198 252 aa15.3■□□□□ 0.04
UBFD1-201ENST00000395878 C10orf111Q8N326 155 aa15.3■□□□□ 0.04
UBFD1-201ENST00000395878 VSTM2AQ8TAG5 236 aa15.3■□□□□ 0.04
UBFD1-201ENST00000395878 FAM210BQ96KR6 192 aa15.3■□□□□ 0.04
UBFD1-201ENST00000395878 MRPS18AQ9NVS2 196 aaKnown RBP15.3■□□□□ 0.04
UBFD1-201ENST00000395878 PPIHO43447 177 aaKnown RBP15.29■□□□□ 0.04
UBFD1-201ENST00000395878 WISP3O95389 354 aaPredicted RBP15.29■□□□□ 0.04
UBFD1-201ENST00000395878 HLA-DRB3P79483 266 aa15.29■□□□□ 0.04
UBFD1-201ENST00000395878 GAB4Q2WGN9 574 aa15.29■□□□□ 0.04
UBFD1-201ENST00000395878 B3GNTL1Q67FW5 361 aaPredicted RBP15.29■□□□□ 0.04
UBFD1-201ENST00000395878 OR2I1PQ8NGU4 316 aa15.29■□□□□ 0.04
UBFD1-201ENST00000395878 C3orf80F5H4A9 247 aa15.29■□□□□ 0.04
UBFD1-201ENST00000395878 HRKO00198 91 aa15.29■□□□□ 0.04
UBFD1-201ENST00000395878 NTN1O95631 604 aa15.29■□□□□ 0.04
UBFD1-201ENST00000395878 FAM24BQ8N5W8 94 aa15.29■□□□□ 0.04
UBFD1-201ENST00000395878 ATP5SQ99766 215 aa15.29■□□□□ 0.04
UBFD1-201ENST00000395878 ASCC3Q8N3C0 2202 aaKnown RBP15.29■□□□□ 0.04
UBFD1-201ENST00000395878 OOEPA6NGQ2 149 aa15.29■□□□□ 0.04
UBFD1-201ENST00000395878 GATCO43716 136 aaKnown RBP15.29■□□□□ 0.04
UBFD1-201ENST00000395878 VDAC1P21796 283 aa15.29■□□□□ 0.04
UBFD1-201ENST00000395878 HIST1H3AP68431 136 aa15.29■□□□□ 0.04
UBFD1-201ENST00000395878 CD300CQ08708 224 aa15.29■□□□□ 0.04
UBFD1-201ENST00000395878 PNRC1Q12796 327 aaPredicted RBP15.29■□□□□ 0.04
UBFD1-201ENST00000395878 SEZ6L2Q6UXD5 910 aa15.29■□□□□ 0.04
UBFD1-201ENST00000395878 GYPAP02724 150 aa15.29■□□□□ 0.04
UBFD1-201ENST00000395878 TOMM20LQ6UXN7 152 aa15.29■□□□□ 0.04
UBFD1-201ENST00000395878 ASB5Q8WWX0 329 aa15.29■□□□□ 0.04
UBFD1-201ENST00000395878 PARD6AQ9NPB6 346 aa15.29■□□□□ 0.04
UBFD1-201ENST00000395878 A0A1B0GTQ1 180 aa15.28■□□□□ 0.04
UBFD1-201ENST00000395878 RBFOX3A6NFN3 312 aa15.28■□□□□ 0.04
UBFD1-201ENST00000395878 OR2J3O76001 311 aa15.28■□□□□ 0.04
UBFD1-201ENST00000395878 EML2O95834 649 aa15.28■□□□□ 0.04
UBFD1-201ENST00000395878 SP1P08047 785 aa15.28■□□□□ 0.04
UBFD1-201ENST00000395878 DYNLT3P51808 116 aa15.28■□□□□ 0.04
UBFD1-201ENST00000395878 HNRNPA3P51991 378 aaKnown RBP15.28■□□□□ 0.04
UBFD1-201ENST00000395878 OR10D4PQ8NGN7 298 aa15.28■□□□□ 0.04
UBFD1-201ENST00000395878 CA10Q9NS85 328 aa15.28■□□□□ 0.04
UBFD1-201ENST00000395878 MEX3AA1L020 520 aaKnown RBP15.28■□□□□ 0.04
UBFD1-201ENST00000395878 SH2D7A6NKC9 451 aaPredicted RBP15.28■□□□□ 0.04
UBFD1-201ENST00000395878 C21orf140B9A014 251 aa15.28■□□□□ 0.04
UBFD1-201ENST00000395878 MRPS11P82912 194 aaKnown RBP15.28■□□□□ 0.04
UBFD1-201ENST00000395878 FOXO1Q12778 655 aa15.28■□□□□ 0.04
UBFD1-201ENST00000395878 TUSC5Q8IXB3 177 aa15.28■□□□□ 0.04
UBFD1-201ENST00000395878 OR2H1Q9GZK4 316 aa15.28■□□□□ 0.04
UBFD1-201ENST00000395878 TRAV38-1A0A0B4J264 116 aa15.28■□□□□ 0.04
UBFD1-201ENST00000395878 GEMIN2O14893 280 aaKnown RBP15.28■□□□□ 0.04
UBFD1-201ENST00000395878 DNPH1O43598 174 aa15.28■□□□□ 0.04
UBFD1-201ENST00000395878 SOX8P57073 446 aa15.28■□□□□ 0.04
UBFD1-201ENST00000395878 KLF9Q13886 244 aaPredicted RBP15.28■□□□□ 0.04
UBFD1-201ENST00000395878 RPEL1Q2QD12 228 aa15.28■□□□□ 0.04
UBFD1-201ENST00000395878 BHLHA15Q7RTS1 189 aaPredicted RBP15.28■□□□□ 0.04
UBFD1-201ENST00000395878 MANBALQ9NQG1 85 aa15.28■□□□□ 0.04
UBFD1-201ENST00000395878 SOX15O60248 233 aa15.28■□□□□ 0.04
UBFD1-201ENST00000395878 GOSR1O95249 250 aa15.28■□□□□ 0.04
UBFD1-201ENST00000395878 MPV17LQ2QL34 196 aa15.28■□□□□ 0.04
UBFD1-201ENST00000395878 R3HDM4Q96D70 268 aa15.28■□□□□ 0.04
UBFD1-201ENST00000395878 DUXBA0A1W2PPF3 345 aa15.27■□□□□ 0.04
UBFD1-201ENST00000395878 SPINT1O43278 529 aa15.27■□□□□ 0.04
UBFD1-201ENST00000395878 TOX4O94842 621 aa15.27■□□□□ 0.04
UBFD1-201ENST00000395878 SPCS3P61009 180 aa15.27■□□□□ 0.04
UBFD1-201ENST00000395878 SPINK9Q5DT21 86 aa15.27■□□□□ 0.04
UBFD1-201ENST00000395878 SCMH1Q96GD3 660 aa15.27■□□□□ 0.04
UBFD1-201ENST00000395878 MMP16P51512 607 aa15.27■□□□□ 0.04
UBFD1-201ENST00000395878 WDR73Q6P4I2 378 aa15.27■□□□□ 0.04
UBFD1-201ENST00000395878 OR6S1Q8NH40 331 aa15.27■□□□□ 0.04
UBFD1-201ENST00000395878 TMEM167BQ9NRX6 74 aa15.27■□□□□ 0.04
UBFD1-201ENST00000395878 OPN4Q9UHM6 478 aa15.27■□□□□ 0.04
UBFD1-201ENST00000395878 FAM90A27PA6NNH2 459 aa15.27■□□□□ 0.03
UBFD1-201ENST00000395878 SNRPEP62304 92 aaKnown RBP15.27■□□□□ 0.03
UBFD1-201ENST00000395878 RNASEKQ6P5S7 137 aaKnown RBP15.27■□□□□ 0.03
UBFD1-201ENST00000395878 C11orf42Q8N5U0 333 aa15.27■□□□□ 0.03
UBFD1-201ENST00000395878 CA5BP1Q8WTZ4 195 aa15.27■□□□□ 0.03
UBFD1-201ENST00000395878 R4GN57 208 aa15.27■□□□□ 0.03
UBFD1-201ENST00000395878 FCN1O00602 326 aa15.27■□□□□ 0.03
UBFD1-201ENST00000395878 PPYP01298 95 aa15.27■□□□□ 0.03
UBFD1-201ENST00000395878 RPS4Y1P22090 263 aaKnown RBP15.27■□□□□ 0.03
UBFD1-201ENST00000395878 PRSS12P56730 875 aa15.27■□□□□ 0.03
UBFD1-201ENST00000395878 SRSF5Q13243 272 aaKnown RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms