RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 ZNF254O75437 659 aa12.47□□□□□ -0.41
SNCA-205ENST00000394991 HMGN1P05114 100 aa12.47□□□□□ -0.41
SNCA-205ENST00000394991 GABRR1P24046 479 aa12.47□□□□□ -0.41
SNCA-205ENST00000394991 CDK2P24941 298 aa12.47□□□□□ -0.41
SNCA-205ENST00000394991 FASP25445 335 aa12.47□□□□□ -0.41
SNCA-205ENST00000394991 CD34P28906 385 aa12.47□□□□□ -0.41
SNCA-205ENST00000394991 OR3A1P47881 315 aa12.47□□□□□ -0.41
SNCA-205ENST00000394991 P2RX3P56373 397 aa12.47□□□□□ -0.41
SNCA-205ENST00000394991 RAB25P57735 213 aa12.47□□□□□ -0.41
SNCA-205ENST00000394991 APOFQ13790 326 aa12.47□□□□□ -0.41
SNCA-205ENST00000394991 HLA-DRB5Q30154 266 aa12.47□□□□□ -0.41
SNCA-205ENST00000394991 TMEM236Q5W0B7 351 aa12.47□□□□□ -0.41
SNCA-205ENST00000394991 HEPN1Q6WQI6 88 aa12.47□□□□□ -0.41
SNCA-205ENST00000394991 EGFL6Q8IUX8 553 aa12.47□□□□□ -0.41
SNCA-205ENST00000394991 ZNF695Q8IW36 515 aa12.47□□□□□ -0.41
SNCA-205ENST00000394991 CHPT1Q8WUD6 406 aa12.47□□□□□ -0.41
SNCA-205ENST00000394991 EMG1Q92979 244 aaKnown RBP12.47□□□□□ -0.41
SNCA-205ENST00000394991 NRBF2Q96F24 287 aa12.47□□□□□ -0.41
SNCA-205ENST00000394991 SEBOXQ9HB31 216 aaPredicted RBP12.47□□□□□ -0.41
SNCA-205ENST00000394991 IKZF2Q9UKS7 526 aa12.47□□□□□ -0.41
SNCA-205ENST00000394991 UBE2J1Q9Y385 318 aaPredicted RBP12.47□□□□□ -0.41
SNCA-205ENST00000394991 LOC110117498-PIK3R3F6TDL0 507 aa12.46□□□□□ -0.41
SNCA-205ENST00000394991 BUB1B-PAK6H3BSN5 160 aa12.46□□□□□ -0.41
SNCA-205ENST00000394991 CCL24O00175 119 aa12.46□□□□□ -0.41
SNCA-205ENST00000394991 MGST3O14880 152 aa12.46□□□□□ -0.41
SNCA-205ENST00000394991 CHATP28329 748 aa12.46□□□□□ -0.41
SNCA-205ENST00000394991 DUSP1P28562 367 aa12.46□□□□□ -0.41
SNCA-205ENST00000394991 ECI1P42126 302 aa12.46□□□□□ -0.41
SNCA-205ENST00000394991 ATP6AP1Q15904 470 aa12.46□□□□□ -0.41
SNCA-205ENST00000394991 DEFB136Q30KP8 78 aa12.46□□□□□ -0.41
SNCA-205ENST00000394991 SLX4IPQ5VYV7 408 aa12.46□□□□□ -0.41
SNCA-205ENST00000394991 OR52W1Q6IF63 320 aa12.46□□□□□ -0.41
SNCA-205ENST00000394991 PLEKHG7Q6ZR37 379 aa12.46□□□□□ -0.41
SNCA-205ENST00000394991 SLC25A26Q70HW3 274 aa12.46□□□□□ -0.41
SNCA-205ENST00000394991 AMIGO2Q86SJ2 522 aa12.46□□□□□ -0.41
SNCA-205ENST00000394991 ELMOD2Q8IZ81 293 aa12.46□□□□□ -0.41
SNCA-205ENST00000394991 TEX12Q9BXU0 123 aa12.46□□□□□ -0.41
SNCA-205ENST00000394991 FAM90A18PA6NE21 464 aa12.45□□□□□ -0.42
SNCA-205ENST00000394991 FAM90A16PA6NEW6 464 aa12.45□□□□□ -0.42
SNCA-205ENST00000394991 FAM90A20PA6NIJ5 464 aa12.45□□□□□ -0.42
SNCA-205ENST00000394991 FAM90A9PA6NNJ1 464 aa12.45□□□□□ -0.42
SNCA-205ENST00000394991 DHRS7CA6NNS2 312 aa12.45□□□□□ -0.42
SNCA-205ENST00000394991 SERPINE3A8MV23 424 aa12.45□□□□□ -0.42
SNCA-205ENST00000394991 FAM90A12PA8MX19 464 aa12.45□□□□□ -0.42
SNCA-205ENST00000394991 FAM90A5PA8MXJ8 464 aa12.45□□□□□ -0.42
SNCA-205ENST00000394991 G3V2T6 193 aa12.45□□□□□ -0.42
SNCA-205ENST00000394991 FAM90A15PP0C7V4 464 aa12.45□□□□□ -0.42
SNCA-205ENST00000394991 FAM90A13PP0C7W8 464 aa12.45□□□□□ -0.42
SNCA-205ENST00000394991 FAM90A14PP0C7W9 464 aa12.45□□□□□ -0.42
SNCA-205ENST00000394991 FAM90A24PP0C7X0 464 aa12.45□□□□□ -0.42
SNCA-205ENST00000394991 ERP29P30040 261 aaKnown RBP12.45□□□□□ -0.42
SNCA-205ENST00000394991 CEACAM3P40198 252 aa12.45□□□□□ -0.42
SNCA-205ENST00000394991 NPBWR2P48146 333 aa12.45□□□□□ -0.42
SNCA-205ENST00000394991 DAPP51397 102 aa12.45□□□□□ -0.42
SNCA-205ENST00000394991 CRISP1P54107 249 aa12.45□□□□□ -0.42
SNCA-205ENST00000394991 GP2P55259 537 aaKnown RBP12.45□□□□□ -0.42
SNCA-205ENST00000394991 CDK5Q00535 292 aa12.45□□□□□ -0.42
SNCA-205ENST00000394991 UBE2V2Q15819 145 aa12.45□□□□□ -0.42
SNCA-205ENST00000394991 C9orf66Q5T8R8 295 aa12.45□□□□□ -0.42
SNCA-205ENST00000394991 BCL2L15Q5TBC7 163 aa12.45□□□□□ -0.42
SNCA-205ENST00000394991 C5orf56Q8N8D9 126 aa12.45□□□□□ -0.42
SNCA-205ENST00000394991 Q8NFD4 153 aa12.45□□□□□ -0.42
SNCA-205ENST00000394991 DNAJC9Q8WXX5 260 aa12.45□□□□□ -0.42
SNCA-205ENST00000394991 APOL4Q9BPW4 351 aa12.45□□□□□ -0.42
SNCA-205ENST00000394991 GAL3ST2Q9H3Q3 398 aa12.45□□□□□ -0.42
SNCA-205ENST00000394991 MOB1AQ9H8S9 216 aa12.45□□□□□ -0.42
SNCA-205ENST00000394991 RBFOX1Q9NWB1 397 aaKnown RBP12.45□□□□□ -0.42
SNCA-205ENST00000394991 SCOCQ9UIL1 159 aa12.45□□□□□ -0.42
SNCA-205ENST00000394991 OR52A1Q9UKL2 312 aa12.45□□□□□ -0.42
SNCA-205ENST00000394991 R4GMQ9 66 aa12.45□□□□□ -0.42
SNCA-205ENST00000394991 CSMD3Q7Z407 3707 aa12.44□□□□□ -0.42
SNCA-205ENST00000394991 EBAG9O00559 213 aa12.44□□□□□ -0.42
SNCA-205ENST00000394991 ENTPD6O75354 484 aa12.44□□□□□ -0.42
SNCA-205ENST00000394991 CALCBP10092 127 aa12.44□□□□□ -0.42
SNCA-205ENST00000394991 FCGR1AP12314 374 aa12.44□□□□□ -0.42
SNCA-205ENST00000394991 CCL1P22362 96 aa12.44□□□□□ -0.42
SNCA-205ENST00000394991 MNDAP41218 407 aa12.44□□□□□ -0.42
SNCA-205ENST00000394991 SNU13P55769 128 aaKnown RBP12.44□□□□□ -0.42
SNCA-205ENST00000394991 FAHD1Q6P587 224 aa12.44□□□□□ -0.42
SNCA-205ENST00000394991 ASB17Q8WXJ9 295 aa12.44□□□□□ -0.42
SNCA-205ENST00000394991 RCHY1Q96PM5 261 aa12.44□□□□□ -0.42
SNCA-205ENST00000394991 SLC25A19Q9HC21 320 aa12.44□□□□□ -0.42
SNCA-205ENST00000394991 KRT84Q9NSB2 600 aa12.44□□□□□ -0.42
SNCA-205ENST00000394991 TVP23BQ9NYZ1 205 aa12.44□□□□□ -0.42
SNCA-205ENST00000394991 SLC7A11Q9UPY5 501 aa12.44□□□□□ -0.42
SNCA-205ENST00000394991 TRGV10A0A0A0MS01 117 aa12.43□□□□□ -0.42
SNCA-205ENST00000394991 OOSP1A8MZH6 123 aa12.43□□□□□ -0.42
SNCA-205ENST00000394991 H3BSH0 61 aa12.43□□□□□ -0.42
SNCA-205ENST00000394991 SIRPB1O00241 398 aa12.43□□□□□ -0.42
SNCA-205ENST00000394991 MITFO75030 526 aaPredicted RBP12.43□□□□□ -0.42
SNCA-205ENST00000394991 FAM106CPP0CH98 169 aa12.43□□□□□ -0.42
SNCA-205ENST00000394991 BCL3P20749 454 aa12.43□□□□□ -0.42
SNCA-205ENST00000394991 GLIPR1P48060 266 aa12.43□□□□□ -0.42
SNCA-205ENST00000394991 RBM39Q14498 530 aaKnown RBP12.43□□□□□ -0.42
SNCA-205ENST00000394991 ZNF146Q15072 292 aa12.43□□□□□ -0.42
SNCA-205ENST00000394991 PTGES3Q15185 160 aaKnown RBP12.43□□□□□ -0.42
SNCA-205ENST00000394991 CCDC144NLQ6NUI1 221 aa12.43□□□□□ -0.42
SNCA-205ENST00000394991 LCNL1Q6ZST4 164 aa12.43□□□□□ -0.42
SNCA-205ENST00000394991 THNSL2Q86YJ6 484 aa12.43□□□□□ -0.42
SNCA-205ENST00000394991 ZDHHC13Q8IUH4 622 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms