RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 FBXW12Q6X9E4 464 aa15.88■□□□□ 0.13
PCDHA1-202ENST00000394633 RBMS3Q6XE24 437 aaKnown RBP15.88■□□□□ 0.13
PCDHA1-202ENST00000394633 Q6ZPA2 131 aa15.88■□□□□ 0.13
PCDHA1-202ENST00000394633 LGI3Q8N145 548 aa15.88■□□□□ 0.13
PCDHA1-202ENST00000394633 PRSS33Q8NF86 280 aa15.88■□□□□ 0.13
PCDHA1-202ENST00000394633 JSRP1Q96MG2 331 aaPredicted RBP15.88■□□□□ 0.13
PCDHA1-202ENST00000394633 COL25A1Q9BXS0 654 aaPredicted RBP15.88■□□□□ 0.13
PCDHA1-202ENST00000394633 TUBA4BQ9H853 241 aa15.88■□□□□ 0.13
PCDHA1-202ENST00000394633 DKKL1Q9UK85 242 aa15.88■□□□□ 0.13
PCDHA1-202ENST00000394633 SHANK1Q9Y566 2161 aa15.88■□□□□ 0.13
PCDHA1-202ENST00000394633 CNOT1A5YKK6 2376 aaKnown RBP15.88■□□□□ 0.13
PCDHA1-202ENST00000394633 LOC102723996A0A087X1L8 192 aa15.87■□□□□ 0.13
PCDHA1-202ENST00000394633 M0R036 132 aa15.87■□□□□ 0.13
PCDHA1-202ENST00000394633 LCATP04180 440 aa15.87■□□□□ 0.13
PCDHA1-202ENST00000394633 CBR1P16152 277 aa15.87■□□□□ 0.13
PCDHA1-202ENST00000394633 LHFPL2Q6ZUX7 228 aa15.87■□□□□ 0.13
PCDHA1-202ENST00000394633 FBXL14Q8N1E6 418 aa15.87■□□□□ 0.13
PCDHA1-202ENST00000394633 OR1F12Q8NHA8 337 aa15.87■□□□□ 0.13
PCDHA1-202ENST00000394633 MOB3AQ96BX8 217 aa15.87■□□□□ 0.13
PCDHA1-202ENST00000394633 NCKAP5O14513 1909 aa15.87■□□□□ 0.13
PCDHA1-202ENST00000394633 NSG1A0A0A6YYJ2 146 aa15.87■□□□□ 0.13
PCDHA1-202ENST00000394633 MED19A0JLT2 244 aaPredicted RBP15.87■□□□□ 0.13
PCDHA1-202ENST00000394633 ST8SIA3O43173 380 aa15.87■□□□□ 0.13
PCDHA1-202ENST00000394633 PRH1P02810 166 aa15.87■□□□□ 0.13
PCDHA1-202ENST00000394633 NOVA1P51513 510 aaKnown RBP15.87■□□□□ 0.13
PCDHA1-202ENST00000394633 CDCP2Q5VXM1 449 aa15.87■□□□□ 0.13
PCDHA1-202ENST00000394633 OSR2Q8N2R0 312 aa15.87■□□□□ 0.13
PCDHA1-202ENST00000394633 GPR137CQ8N3F9 429 aa15.87■□□□□ 0.13
PCDHA1-202ENST00000394633 ZNF561Q8N587 486 aa15.87■□□□□ 0.13
PCDHA1-202ENST00000394633 HSD17B11Q8NBQ5 300 aa15.87■□□□□ 0.13
PCDHA1-202ENST00000394633 AGBL5Q8NDL9 886 aa15.87■□□□□ 0.13
PCDHA1-202ENST00000394633 LILRB1Q8NHL6 650 aaPredicted RBP15.87■□□□□ 0.13
PCDHA1-202ENST00000394633 TAAR9Q96RI9 348 aa15.87■□□□□ 0.13
PCDHA1-202ENST00000394633 BCO1Q9HAY6 547 aa15.87■□□□□ 0.13
PCDHA1-202ENST00000394633 ZNF286AQ9HBT8 521 aa15.87■□□□□ 0.13
PCDHA1-202ENST00000394633 STRAPQ9Y3F4 350 aaKnown RBP15.87■□□□□ 0.13
PCDHA1-202ENST00000394633 AHCTF1Q8WYP5 2266 aa15.86■□□□□ 0.13
PCDHA1-202ENST00000394633 IGHV1-45A0A0A0MS14 117 aa15.86■□□□□ 0.13
PCDHA1-202ENST00000394633 PHF1O43189 567 aaPredicted RBP15.86■□□□□ 0.13
PCDHA1-202ENST00000394633 NRASP01111 189 aa15.86■□□□□ 0.13
PCDHA1-202ENST00000394633 GLAP06280 429 aa15.86■□□□□ 0.13
PCDHA1-202ENST00000394633 PATE4P0C8F1 98 aa15.86■□□□□ 0.13
PCDHA1-202ENST00000394633 NTF4P34130 210 aa15.86■□□□□ 0.13
PCDHA1-202ENST00000394633 PDCD1Q15116 288 aa15.86■□□□□ 0.13
PCDHA1-202ENST00000394633 TMEM42Q69YG0 159 aa15.86■□□□□ 0.13
PCDHA1-202ENST00000394633 AKR7LQ8NHP1 331 aa15.86■□□□□ 0.13
PCDHA1-202ENST00000394633 NANPQ8TBE9 248 aa15.86■□□□□ 0.13
PCDHA1-202ENST00000394633 NTNG2Q96CW9 530 aa15.86■□□□□ 0.13
PCDHA1-202ENST00000394633 TMEM9BQ9NQ34 198 aa15.86■□□□□ 0.13
PCDHA1-202ENST00000394633 UMAD1C9J7I0 102 aa15.86■□□□□ 0.13
PCDHA1-202ENST00000394633 CST2P09228 141 aa15.86■□□□□ 0.13
PCDHA1-202ENST00000394633 RAB5CP51148 216 aa15.86■□□□□ 0.13
PCDHA1-202ENST00000394633 UCP3P55916 312 aa15.86■□□□□ 0.13
PCDHA1-202ENST00000394633 KRBOX4Q5JUW0 171 aa15.86■□□□□ 0.13
PCDHA1-202ENST00000394633 OR4D5Q8NGN0 318 aa15.86■□□□□ 0.13
PCDHA1-202ENST00000394633 TP53RKQ96S44 253 aa15.86■□□□□ 0.13
PCDHA1-202ENST00000394633 SYT3Q9BQG1 590 aa15.86■□□□□ 0.13
PCDHA1-202ENST00000394633 ST3GAL6Q9Y274 331 aa15.86■□□□□ 0.13
PCDHA1-202ENST00000394633 FBXO7Q9Y3I1 522 aa15.86■□□□□ 0.13
PCDHA1-202ENST00000394633 SDK2Q58EX2 2172 aa15.85■□□□□ 0.13
PCDHA1-202ENST00000394633 S100A6P06703 90 aa15.85■□□□□ 0.13
PCDHA1-202ENST00000394633 AADACP22760 399 aa15.85■□□□□ 0.13
PCDHA1-202ENST00000394633 PPP1CCP36873 323 aaKnown RBP15.85■□□□□ 0.13
PCDHA1-202ENST00000394633 GLP1RP43220 463 aa15.85■□□□□ 0.13
PCDHA1-202ENST00000394633 TMEM182Q6ZP80 229 aaPredicted RBP15.85■□□□□ 0.13
PCDHA1-202ENST00000394633 SLC16A13Q7RTY0 426 aa15.85■□□□□ 0.13
PCDHA1-202ENST00000394633 SLC35G3Q8N808 338 aa15.85■□□□□ 0.13
PCDHA1-202ENST00000394633 IMMP1LQ96LU5 166 aa15.85■□□□□ 0.13
PCDHA1-202ENST00000394633 RSRP1Q9BUV0 290 aa15.85■□□□□ 0.13
PCDHA1-202ENST00000394633 CRLF2Q9HC73 371 aa15.85■□□□□ 0.13
PCDHA1-202ENST00000394633 SH2D2AQ9NP31 389 aa15.85■□□□□ 0.13
PCDHA1-202ENST00000394633 GVINP1Q7Z2Y8 2422 aa15.84■□□□□ 0.13
PCDHA1-202ENST00000394633 hCG_1809904A0A1W2PP81 198 aa15.84■□□□□ 0.13
PCDHA1-202ENST00000394633 A0A1W2PR64 198 aa15.84■□□□□ 0.13
PCDHA1-202ENST00000394633 A0A1W2PRV1 198 aa15.84■□□□□ 0.13
PCDHA1-202ENST00000394633 OR6C6A6NF89 314 aa15.84■□□□□ 0.13
PCDHA1-202ENST00000394633 K7N7A8 449 aa15.84■□□□□ 0.13
PCDHA1-202ENST00000394633 UMODP07911 640 aa15.84■□□□□ 0.13
PCDHA1-202ENST00000394633 CYC1P08574 325 aa15.84■□□□□ 0.13
PCDHA1-202ENST00000394633 SMIM6P0DI80 62 aa15.84■□□□□ 0.13
PCDHA1-202ENST00000394633 FGF5P12034 268 aa15.84■□□□□ 0.13
PCDHA1-202ENST00000394633 ZNF32P17041 273 aa15.84■□□□□ 0.13
PCDHA1-202ENST00000394633 ASCL1P50553 236 aa15.84■□□□□ 0.13
PCDHA1-202ENST00000394633 RAC1P63000 192 aa15.84■□□□□ 0.13
PCDHA1-202ENST00000394633 TRA2AQ13595 282 aaKnown RBP eCLIP15.84■□□□□ 0.13
PCDHA1-202ENST00000394633 KRTAP27-1Q3LI81 207 aa15.84■□□□□ 0.13
PCDHA1-202ENST00000394633 WDR54Q9H977 334 aa15.84■□□□□ 0.13
PCDHA1-202ENST00000394633 TMEM38BQ9NVV0 291 aa15.84■□□□□ 0.13
PCDHA1-202ENST00000394633 DCHS1Q96JQ0 3298 aa15.84■□□□□ 0.13
PCDHA1-202ENST00000394633 COX6A1P12074 109 aa15.84■□□□□ 0.13
PCDHA1-202ENST00000394633 RAB5AP20339 215 aa15.84■□□□□ 0.13
PCDHA1-202ENST00000394633 PMELP40967 661 aa15.84■□□□□ 0.13
PCDHA1-202ENST00000394633 EWSR1Q01844 656 aaKnown RBP eCLIP15.84■□□□□ 0.13
PCDHA1-202ENST00000394633 MEX3BQ6ZN04 569 aaKnown RBP15.84■□□□□ 0.13
PCDHA1-202ENST00000394633 BOD1Q96IK1 185 aa15.84■□□□□ 0.13
PCDHA1-202ENST00000394633 SLC35B3Q9H1N7 401 aa15.84■□□□□ 0.13
PCDHA1-202ENST00000394633 C11orf1Q9H5F2 150 aa15.84■□□□□ 0.13
PCDHA1-202ENST00000394633 IL36GQ9NZH8 169 aa15.84■□□□□ 0.13
PCDHA1-202ENST00000394633 TMED3Q9Y3Q3 217 aa15.84■□□□□ 0.13
PCDHA1-202ENST00000394633 RFNGQ9Y644 331 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 488.1 ms