RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 PRAF2O60831 178 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 FCGR3AP08637 254 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 TRAPPC2P0DI81 140 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 TRAPPC2BP0DI82 140 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 EIF2B2P49770 351 aaKnown RBP7.32□□□□□ -1.24
TDP1-203ENST00000393454 CD83Q01151 205 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 IL13RA2Q14627 380 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 DAZAP2Q15038 168 aaPredicted RBP7.32□□□□□ -1.24
TDP1-203ENST00000393454 METTL11BQ5VVY1 283 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 TMEM17Q86X19 198 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 C11orf53Q8IXP5 236 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 SUMF2Q8NBJ7 301 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 OR5AP2Q8NGF4 316 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 RDH5Q92781 318 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 MRPL24Q96A35 216 aaKnown RBP7.32□□□□□ -1.24
TDP1-203ENST00000393454 NRIP2Q9BQI9 281 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 PPA2Q9H2U2 334 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 GHITMQ9H3K2 345 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 SPACA1Q9HBV2 294 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 GPN1Q9HCN4 374 aaPredicted RBP7.32□□□□□ -1.24
TDP1-203ENST00000393454 C1orf123Q9NWV4 160 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 ZNF69Q9UC07 566 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 OR14J1Q9UGF5 321 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 ZNF221Q9UK13 617 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 EDARQ9UNE0 448 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 PLCE1Q9P212 2302 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 IGLV3-9A0A075B6K5 115 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 IGKV1D-8A0A087WSZ0 117 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 A0A1B0GUH1 482 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 TMEM82A0PJX8 343 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 C7orf66A4D0T2 115 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 VSTM5A8MXK1 200 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 SIRPB1O00241 398 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 WNT9BO14905 357 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 TPD52L2O43399 206 aaKnown RBP7.32□□□□□ -1.24
TDP1-203ENST00000393454 GLRA1P23415 457 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 DTYMKP23919 212 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 GRNP28799 593 aaKnown RBP7.32□□□□□ -1.24
TDP1-203ENST00000393454 PMELP40967 661 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 ZNF81P51508 661 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 ZMYND11Q15326 602 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 C4orf46Q504U0 113 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 VAX1Q5SQQ9 334 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 WDR82Q6UXN9 313 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 GLDNQ6ZMI3 551 aaPredicted RBP7.32□□□□□ -1.24
TDP1-203ENST00000393454 BOLLQ8N9W6 283 aaKnown RBP7.32□□□□□ -1.24
TDP1-203ENST00000393454 POC1AQ8NBT0 407 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 OR13C8Q8NGS7 320 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 PLPPR2Q96GM1 343 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 DMRTB1Q96MA1 342 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 DPCDQ9BVM2 203 aaPredicted RBP7.32□□□□□ -1.24
TDP1-203ENST00000393454 CHST6Q9GZX3 395 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 C12orf4Q9NQ89 552 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 ING3Q9NXR8 418 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 SLC2A8Q9NY64 477 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 ANXA10Q9UJ72 324 aa7.32□□□□□ -1.24
TDP1-203ENST00000393454 TRAV24A0A0B4J272 114 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 SH2D1BO14796 132 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 HPXP02790 462 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 OR4A8P0C604 315 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 VSIG10L2P0DP72 767 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 CD200P41217 278 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 ERVK11-1P61568 191 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 CHD3Q12873 2000 aaKnown RBP7.31□□□□□ -1.24
TDP1-203ENST00000393454 RBM39Q14498 530 aaKnown RBP7.31□□□□□ -1.24
TDP1-203ENST00000393454 CDK10Q15131 360 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 FCN2Q15485 313 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 CDSNQ15517 529 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 FBXL19-AS1Q494R0 122 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 PAN3Q58A45 887 aaKnown RBP7.31□□□□□ -1.24
TDP1-203ENST00000393454 ARRDC1Q8N5I2 433 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 OR6F1Q8NGZ6 308 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 LRRC29Q8WV35 223 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 CCDC107Q8WV48 283 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 OR2V2Q96R30 315 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 WDR13Q9H1Z4 485 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 ZNF286AQ9HBT8 521 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 RANGRFQ9HD47 186 aaPredicted RBP7.31□□□□□ -1.24
TDP1-203ENST00000393454 ETAA1Q9NY74 926 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 RCC2Q9P258 522 aaKnown RBP7.31□□□□□ -1.24
TDP1-203ENST00000393454 GLS2Q9UI32 602 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 A0A1B0GWJ7 208 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 OR2AT4A6NND4 320 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 CREBL2O60519 120 aaPredicted RBP7.31□□□□□ -1.24
TDP1-203ENST00000393454 NOS1APO75052 506 aaPredicted RBP7.31□□□□□ -1.24
TDP1-203ENST00000393454 OR2H2O95918 312 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 IL5P05113 134 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 CD3EP07766 207 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 ACAA1P09110 424 aaPredicted RBP7.31□□□□□ -1.24
TDP1-203ENST00000393454 GNLYP22749 145 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 TNFSF4P23510 183 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 RBMXP38159 391 aaKnown RBP7.31□□□□□ -1.24
TDP1-203ENST00000393454 NPY4RP50391 375 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 TNFAIP6P98066 277 aaPredicted RBP7.31□□□□□ -1.24
TDP1-203ENST00000393454 HOXA4Q00056 320 aaPredicted RBP7.31□□□□□ -1.24
TDP1-203ENST00000393454 C11orf91Q3C1V1 193 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 NCMAPQ5T1S8 102 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 ATPAF1Q5TC12 328 aaPredicted RBP7.31□□□□□ -1.24
TDP1-203ENST00000393454 Q6P435 159 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 C17orf107Q6ZR85 190 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms