RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 AK3Q9UIJ7 227 aa12.78□□□□□ -0.36
MKS1-202ENST00000393119 SLC25A15Q9Y619 301 aa12.78□□□□□ -0.36
MKS1-202ENST00000393119 TPRP12270 2363 aaKnown RBP12.78□□□□□ -0.36
MKS1-202ENST00000393119 ANKRD30BLA7E2S9 258 aa12.78□□□□□ -0.36
MKS1-202ENST00000393119 CPT2P23786 658 aa12.78□□□□□ -0.36
MKS1-202ENST00000393119 CEACAM8P31997 349 aaPredicted RBP12.78□□□□□ -0.36
MKS1-202ENST00000393119 STEAP2Q8NFT2 490 aa12.78□□□□□ -0.36
MKS1-202ENST00000393119 OR4K15Q8NH41 348 aa12.78□□□□□ -0.36
MKS1-202ENST00000393119 PCDHB16Q9NRJ7 776 aa12.78□□□□□ -0.36
MKS1-202ENST00000393119 ZNF69Q9UC07 566 aa12.78□□□□□ -0.36
MKS1-202ENST00000393119 VSIG4Q9Y279 399 aa12.78□□□□□ -0.36
MKS1-202ENST00000393119 M0R1B8 84 aa12.77□□□□□ -0.36
MKS1-202ENST00000393119 CNOT4O95628 575 aaKnown RBP12.77□□□□□ -0.36
MKS1-202ENST00000393119 IL5P05113 134 aa12.77□□□□□ -0.36
MKS1-202ENST00000393119 PI3P19957 117 aa12.77□□□□□ -0.36
MKS1-202ENST00000393119 TIMP3P35625 211 aa12.77□□□□□ -0.36
MKS1-202ENST00000393119 ESPL1Q14674 2120 aa12.77□□□□□ -0.36
MKS1-202ENST00000393119 RBMS2Q15434 407 aaKnown RBP12.77□□□□□ -0.36
MKS1-202ENST00000393119 RNASE10Q5GAN6 216 aaKnown RBP12.77□□□□□ -0.36
MKS1-202ENST00000393119 ZNF626Q68DY1 528 aa12.77□□□□□ -0.36
MKS1-202ENST00000393119 BEND4Q6ZU67 534 aa12.77□□□□□ -0.36
MKS1-202ENST00000393119 SLC36A1Q7Z2H8 476 aa12.77□□□□□ -0.36
MKS1-202ENST00000393119 LRP11Q86VZ4 500 aa12.77□□□□□ -0.36
MKS1-202ENST00000393119 CHIAQ9BZP6 476 aa12.77□□□□□ -0.36
MKS1-202ENST00000393119 MSL2Q9HCI7 577 aa12.77□□□□□ -0.36
MKS1-202ENST00000393119 PFDN2Q9UHV9 154 aa12.77□□□□□ -0.36
MKS1-202ENST00000393119 IGHV2OR16-5A0A0B4J2B6 119 aa12.77□□□□□ -0.37
MKS1-202ENST00000393119 NUPL2O15504 423 aaKnown RBP12.77□□□□□ -0.37
MKS1-202ENST00000393119 OR7C1O76099 320 aaPredicted RBP12.77□□□□□ -0.37
MKS1-202ENST00000393119 SIX6O95475 246 aa12.77□□□□□ -0.37
MKS1-202ENST00000393119 TFF1P04155 84 aa12.77□□□□□ -0.37
MKS1-202ENST00000393119 GSTP1P09211 210 aaKnown RBP12.77□□□□□ -0.37
MKS1-202ENST00000393119 S100A11P31949 105 aa12.77□□□□□ -0.37
MKS1-202ENST00000393119 FAUP35544 74 aaKnown RBP12.77□□□□□ -0.37
MKS1-202ENST00000393119 MARS2Q96GW9 593 aaKnown RBP12.77□□□□□ -0.37
MKS1-202ENST00000393119 SNRPGP15A8MWD9 76 aa12.76□□□□□ -0.37
MKS1-202ENST00000393119 PRRG2O14669 202 aa12.76□□□□□ -0.37
MKS1-202ENST00000393119 SEC61A1P61619 476 aaKnown RBP12.76□□□□□ -0.37
MKS1-202ENST00000393119 ATPAF1Q5TC12 328 aaPredicted RBP12.76□□□□□ -0.37
MKS1-202ENST00000393119 VHLLQ6RSH7 139 aa12.76□□□□□ -0.37
MKS1-202ENST00000393119 ALKAL2Q6UX46 152 aa12.76□□□□□ -0.37
MKS1-202ENST00000393119 DPPA2Q7Z7J5 298 aa12.76□□□□□ -0.37
MKS1-202ENST00000393119 ADAD2Q8NCV1 583 aaKnown RBP12.76□□□□□ -0.37
MKS1-202ENST00000393119 OR5L1Q8NGL2 311 aa12.76□□□□□ -0.37
MKS1-202ENST00000393119 EMG1Q92979 244 aaKnown RBP12.76□□□□□ -0.37
MKS1-202ENST00000393119 ZNF98A6NK75 572 aa12.76□□□□□ -0.37
MKS1-202ENST00000393119 PCP4L1A6NKN8 68 aa12.76□□□□□ -0.37
MKS1-202ENST00000393119 GRPP07492 148 aa12.76□□□□□ -0.37
MKS1-202ENST00000393119 PPP3CBP16298 524 aa12.76□□□□□ -0.37
MKS1-202ENST00000393119 CHATP28329 748 aa12.76□□□□□ -0.37
MKS1-202ENST00000393119 P2RY6Q15077 328 aa12.76□□□□□ -0.37
MKS1-202ENST00000393119 FBXW12Q6X9E4 464 aa12.76□□□□□ -0.37
MKS1-202ENST00000393119 ZNF826PQ6ZT77 177 aa12.76□□□□□ -0.37
MKS1-202ENST00000393119 MUC20Q8N307 709 aaPredicted RBP12.76□□□□□ -0.37
MKS1-202ENST00000393119 CSNK2A3Q8NEV1 391 aa12.76□□□□□ -0.37
MKS1-202ENST00000393119 PXT1Q8NFP0 134 aa12.76□□□□□ -0.37
MKS1-202ENST00000393119 HIST1H2AAQ96QV6 131 aa12.76□□□□□ -0.37
MKS1-202ENST00000393119 ZMAT5Q9UDW3 170 aaKnown RBP12.76□□□□□ -0.37
MKS1-202ENST00000393119 ICE1Q9Y2F5 2266 aa12.75□□□□□ -0.37
MKS1-202ENST00000393119 A8MXE2 369 aa12.75□□□□□ -0.37
MKS1-202ENST00000393119 MLNRO43193 412 aa12.75□□□□□ -0.37
MKS1-202ENST00000393119 IGLV1-44P01699 117 aa12.75□□□□□ -0.37
MKS1-202ENST00000393119 CCKARP32238 428 aa12.75□□□□□ -0.37
MKS1-202ENST00000393119 RBM11P57052 281 aaKnown RBP12.75□□□□□ -0.37
MKS1-202ENST00000393119 ZNF660Q6AZW8 331 aaPredicted RBP12.75□□□□□ -0.37
MKS1-202ENST00000393119 Q6ZR03 302 aa12.75□□□□□ -0.37
MKS1-202ENST00000393119 TMUB2Q71RG4 321 aa12.75□□□□□ -0.37
MKS1-202ENST00000393119 OR5T2Q8NGG2 359 aa12.75□□□□□ -0.37
MKS1-202ENST00000393119 OR5A2Q8NGI9 324 aa12.75□□□□□ -0.37
MKS1-202ENST00000393119 COQ8AQ8NI60 647 aa12.75□□□□□ -0.37
MKS1-202ENST00000393119 PRR13Q9NZ81 148 aa12.75□□□□□ -0.37
MKS1-202ENST00000393119 POM121CA8CG34 1229 aa12.74□□□□□ -0.37
MKS1-202ENST00000393119 CDIPTO14735 213 aa12.74□□□□□ -0.37
MKS1-202ENST00000393119 RP2O75695 350 aa12.74□□□□□ -0.37
MKS1-202ENST00000393119 AMY2BP19961 511 aa12.74□□□□□ -0.37
MKS1-202ENST00000393119 NPY4RP50391 375 aa12.74□□□□□ -0.37
MKS1-202ENST00000393119 SSBP1Q04837 148 aaKnown RBP12.74□□□□□ -0.37
MKS1-202ENST00000393119 MRPL49Q13405 166 aaKnown RBP12.74□□□□□ -0.37
MKS1-202ENST00000393119 LY6DQ14210 128 aa12.74□□□□□ -0.37
MKS1-202ENST00000393119 SPRNQ5BIV9 151 aa12.74□□□□□ -0.37
MKS1-202ENST00000393119 RELL2Q8NC24 303 aaPredicted RBP12.74□□□□□ -0.37
MKS1-202ENST00000393119 C1orf162Q8NEQ5 155 aaPredicted RBP12.74□□□□□ -0.37
MKS1-202ENST00000393119 MARCH1Q8TCQ1 289 aa12.74□□□□□ -0.37
MKS1-202ENST00000393119 OCSTAMPQ9BR26 566 aa12.74□□□□□ -0.37
MKS1-202ENST00000393119 NUDT16L1Q9BRJ7 211 aaKnown RBP12.74□□□□□ -0.37
MKS1-202ENST00000393119 LIME1Q9H400 295 aa12.74□□□□□ -0.37
MKS1-202ENST00000393119 OPN4Q9UHM6 478 aa12.74□□□□□ -0.37
MKS1-202ENST00000393119 PLEKHA6Q9Y2H5 1048 aa12.74□□□□□ -0.37
MKS1-202ENST00000393119 F5H5P2 479 aa12.74□□□□□ -0.37
MKS1-202ENST00000393119 C4orf46Q504U0 113 aa12.74□□□□□ -0.37
MKS1-202ENST00000393119 LIN54Q6MZP7 749 aa12.74□□□□□ -0.37
MKS1-202ENST00000393119 LURAP1LQ8IV03 231 aa12.74□□□□□ -0.37
MKS1-202ENST00000393119 CCDC36Q8IYA8 594 aa12.74□□□□□ -0.37
MKS1-202ENST00000393119 OR51I2Q9H344 312 aa12.74□□□□□ -0.37
MKS1-202ENST00000393119 HEATR1Q9H583 2144 aaKnown RBP12.74□□□□□ -0.37
MKS1-202ENST00000393119 IFT22Q9H7X7 185 aa12.74□□□□□ -0.37
MKS1-202ENST00000393119 COL6A6A6NMZ7 2263 aa12.74□□□□□ -0.37
MKS1-202ENST00000393119 ROS1P08922 2347 aa12.74□□□□□ -0.37
MKS1-202ENST00000393119 TMEM82A0PJX8 343 aa12.73□□□□□ -0.37
MKS1-202ENST00000393119 SCGNO76038 276 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms