RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 RPL29P47914 159 aaKnown RBP16.55■□□□□ 0.24
CCDC50-202ENST00000392456 MEOX1P50221 254 aa16.55■□□□□ 0.24
CCDC50-202ENST00000392456 KLF3P57682 345 aaPredicted RBP16.55■□□□□ 0.24
CCDC50-202ENST00000392456 DPY19L4Q7Z388 723 aa16.55■□□□□ 0.24
CCDC50-202ENST00000392456 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.55■□□□□ 0.24
CCDC50-202ENST00000392456 SLC35E3Q7Z769 313 aa16.55■□□□□ 0.24
CCDC50-202ENST00000392456 UEVLDQ8IX04 471 aa16.55■□□□□ 0.24
CCDC50-202ENST00000392456 KIR2DL5AQ8N109 375 aa16.55■□□□□ 0.24
CCDC50-202ENST00000392456 TMEM251Q8N6I4 163 aa16.55■□□□□ 0.24
CCDC50-202ENST00000392456 OR14K1Q8NGZ2 314 aa16.55■□□□□ 0.24
CCDC50-202ENST00000392456 FRZBQ92765 325 aa16.55■□□□□ 0.24
CCDC50-202ENST00000392456 SCRT1Q9BWW7 348 aa16.55■□□□□ 0.24
CCDC50-202ENST00000392456 MSL2Q9HCI7 577 aa16.55■□□□□ 0.24
CCDC50-202ENST00000392456 MRPL22Q9NWU5 206 aaKnown RBP16.55■□□□□ 0.24
CCDC50-202ENST00000392456 COA3Q9Y2R0 106 aaPredicted RBP16.55■□□□□ 0.24
CCDC50-202ENST00000392456 PHF3Q92576 2039 aaKnown RBP16.55■□□□□ 0.24
CCDC50-202ENST00000392456 A0A1W2PPK0 400 aa16.54■□□□□ 0.24
CCDC50-202ENST00000392456 KLK10O43240 276 aa16.54■□□□□ 0.24
CCDC50-202ENST00000392456 ITGB2P05107 769 aa16.54■□□□□ 0.24
CCDC50-202ENST00000392456 PCGF3Q3KNV8 242 aa16.54■□□□□ 0.24
CCDC50-202ENST00000392456 RNFT1Q5M7Z0 435 aa16.54■□□□□ 0.24
CCDC50-202ENST00000392456 C11orf42Q8N5U0 333 aa16.54■□□□□ 0.24
CCDC50-202ENST00000392456 SLC35G3Q8N808 338 aa16.54■□□□□ 0.24
CCDC50-202ENST00000392456 SMAD5Q99717 465 aaKnown RBP16.54■□□□□ 0.24
CCDC50-202ENST00000392456 BSNQ9UPA5 3926 aa16.54■□□□□ 0.24
CCDC50-202ENST00000392456 SMAD9O15198 467 aaKnown RBP16.54■□□□□ 0.24
CCDC50-202ENST00000392456 ID4P47928 161 aa16.54■□□□□ 0.24
CCDC50-202ENST00000392456 DAP3P51398 398 aaKnown RBP16.54■□□□□ 0.24
CCDC50-202ENST00000392456 C1orf194Q5T5A4 169 aa16.54■□□□□ 0.24
CCDC50-202ENST00000392456 CARD17Q5XLA6 110 aa16.54■□□□□ 0.24
CCDC50-202ENST00000392456 OR6N2Q8NGY6 317 aa16.54■□□□□ 0.24
CCDC50-202ENST00000392456 LYPD6BQ8NI32 183 aa16.54■□□□□ 0.24
CCDC50-202ENST00000392456 AMELYQ99218 206 aa16.54■□□□□ 0.24
CCDC50-202ENST00000392456 NKX3-1Q99801 234 aaPredicted RBP16.54■□□□□ 0.24
CCDC50-202ENST00000392456 CSTL1Q9H114 145 aa16.54■□□□□ 0.24
CCDC50-202ENST00000392456 PIEZO2Q9H5I5 2752 aa16.54■□□□□ 0.24
CCDC50-202ENST00000392456 HLA-DQA2P01906 255 aa16.53■□□□□ 0.24
CCDC50-202ENST00000392456 OR5AC1P0C628 307 aa16.53■□□□□ 0.24
CCDC50-202ENST00000392456 PAX5Q02548 391 aa16.53■□□□□ 0.24
CCDC50-202ENST00000392456 FAHD2BQ6P2I3 314 aaPredicted RBP16.53■□□□□ 0.24
CCDC50-202ENST00000392456 TMED4Q7Z7H5 227 aa16.53■□□□□ 0.24
CCDC50-202ENST00000392456 NUDT11Q96G61 164 aa16.53■□□□□ 0.24
CCDC50-202ENST00000392456 FAHD2AQ96GK7 314 aa16.53■□□□□ 0.24
CCDC50-202ENST00000392456 OXGR1Q96P68 337 aa16.53■□□□□ 0.24
CCDC50-202ENST00000392456 MRPL13Q9BYD1 178 aaKnown RBP16.53■□□□□ 0.24
CCDC50-202ENST00000392456 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.53■□□□□ 0.24
CCDC50-202ENST00000392456 PITPNC1Q9UKF7 332 aa16.53■□□□□ 0.24
CCDC50-202ENST00000392456 C20orf202A1L168 122 aa16.53■□□□□ 0.24
CCDC50-202ENST00000392456 J3QW42 95 aa16.53■□□□□ 0.24
CCDC50-202ENST00000392456 CCL25O15444 150 aa16.53■□□□□ 0.24
CCDC50-202ENST00000392456 MELTFP08582 738 aa16.53■□□□□ 0.24
CCDC50-202ENST00000392456 ZNF43P17038 809 aa16.53■□□□□ 0.24
CCDC50-202ENST00000392456 CD34P28906 385 aa16.53■□□□□ 0.24
CCDC50-202ENST00000392456 TNFSF10P50591 281 aa16.53■□□□□ 0.24
CCDC50-202ENST00000392456 TAS2R20P59543 309 aa16.53■□□□□ 0.24
CCDC50-202ENST00000392456 ACTC1P68032 377 aa16.53■□□□□ 0.24
CCDC50-202ENST00000392456 ACTA1P68133 377 aa16.53■□□□□ 0.24
CCDC50-202ENST00000392456 FCRLAQ7L513 359 aa16.53■□□□□ 0.24
CCDC50-202ENST00000392456 SLC16A9Q7RTY1 509 aa16.53■□□□□ 0.24
CCDC50-202ENST00000392456 BIVMQ86UB2 503 aa16.53■□□□□ 0.24
CCDC50-202ENST00000392456 TMEM183AQ8IXX5 376 aa16.53■□□□□ 0.24
CCDC50-202ENST00000392456 PELI1Q96FA3 418 aa16.53■□□□□ 0.24
CCDC50-202ENST00000392456 S100A16Q96FQ6 103 aaKnown RBP16.53■□□□□ 0.24
CCDC50-202ENST00000392456 ZNF845Q96IR2 970 aaPredicted RBP16.53■□□□□ 0.24
CCDC50-202ENST00000392456 INTS14Q96SY0 518 aa16.53■□□□□ 0.24
CCDC50-202ENST00000392456 KCNG2Q9UJ96 466 aa16.53■□□□□ 0.24
CCDC50-202ENST00000392456 AMDHD2Q9Y303 409 aa16.53■□□□□ 0.24
CCDC50-202ENST00000392456 A0A087WV48 116 aa16.52■□□□□ 0.24
CCDC50-202ENST00000392456 NPIPB13A6NJU9 1138 aa16.52■□□□□ 0.24
CCDC50-202ENST00000392456 NPIPB4C9JG80 1138 aa16.52■□□□□ 0.24
CCDC50-202ENST00000392456 CXCL13O43927 109 aa16.52■□□□□ 0.24
CCDC50-202ENST00000392456 GLSO94925 669 aaPredicted RBP16.52■□□□□ 0.24
CCDC50-202ENST00000392456 TK1P04183 234 aa16.52■□□□□ 0.24
CCDC50-202ENST00000392456 PGA3P0DJD8 388 aa16.52■□□□□ 0.24
CCDC50-202ENST00000392456 HLA-GP17693 338 aa16.52■□□□□ 0.24
CCDC50-202ENST00000392456 SULT1A2P50226 295 aa16.52■□□□□ 0.24
CCDC50-202ENST00000392456 PMP22Q01453 160 aa16.52■□□□□ 0.24
CCDC50-202ENST00000392456 PLGLB1Q02325 96 aa16.52■□□□□ 0.24
CCDC50-202ENST00000392456 ZNF766Q5HY98 468 aa16.52■□□□□ 0.24
CCDC50-202ENST00000392456 ZNF343Q6P1L6 599 aa16.52■□□□□ 0.24
CCDC50-202ENST00000392456 MTFP1Q9UDX5 166 aa16.52■□□□□ 0.24
CCDC50-202ENST00000392456 ZNF891A8MT65 544 aaPredicted RBP16.52■□□□□ 0.23
CCDC50-202ENST00000392456 WISP2O76076 250 aa16.52■□□□□ 0.23
CCDC50-202ENST00000392456 HPNP05981 417 aa16.52■□□□□ 0.23
CCDC50-202ENST00000392456 CDK2P24941 298 aa16.52■□□□□ 0.23
CCDC50-202ENST00000392456 PSMB10P40306 273 aa16.52■□□□□ 0.23
CCDC50-202ENST00000392456 EIF1AXP47813 144 aaKnown RBP16.52■□□□□ 0.23
CCDC50-202ENST00000392456 ATP6V1FQ16864 119 aa16.52■□□□□ 0.23
CCDC50-202ENST00000392456 LRRC69Q6ZNQ3 347 aa16.52■□□□□ 0.23
CCDC50-202ENST00000392456 CDC20BQ86Y33 519 aa16.52■□□□□ 0.23
CCDC50-202ENST00000392456 RNF166Q96A37 237 aaPredicted RBP16.52■□□□□ 0.23
CCDC50-202ENST00000392456 ELOVL1Q9BW60 279 aa16.52■□□□□ 0.23
CCDC50-202ENST00000392456 TRBV6-7A0A0A0MS04 114 aa16.51■□□□□ 0.23
CCDC50-202ENST00000392456 A6NIZ1 184 aa16.51■□□□□ 0.23
CCDC50-202ENST00000392456 ARL6IP5O75915 188 aa16.51■□□□□ 0.23
CCDC50-202ENST00000392456 BPNT1O95861 308 aa16.51■□□□□ 0.23
CCDC50-202ENST00000392456 ERCC1P07992 297 aaPredicted RBP16.51■□□□□ 0.23
CCDC50-202ENST00000392456 CST2P09228 141 aa16.51■□□□□ 0.23
CCDC50-202ENST00000392456 NTF4P34130 210 aa16.51■□□□□ 0.23
CCDC50-202ENST00000392456 SRYQ05066 204 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms