RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 IGHV3-33P01772 117 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 CSTBP04080 98 aaKnown RBP0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 GAPDHP04406 335 aaKnown RBP0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 PRM2P04554 102 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 SERPING1P05155 500 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 HLA-DQB2P05538 268 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 NUDT7P0C024 238 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 C8orf88P0DMB2 117 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 IGHV3-30-3P0DP02 117 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 IGHV3-30-5P0DP03 117 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 NEFHP12036 1026 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 MT1GP13640 62 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 PDIA4P13667 645 aaKnown RBP0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 HSD3B1P14060 373 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 CSNK2A2P19784 350 aaPredicted RBP0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 MX1P20591 662 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 CCNCP24863 283 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 GSTM2P28161 218 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 EPHA2P29317 976 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 RPL3P39023 403 aaKnown RBP0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 SSR2P43308 183 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 OR3A3P47888 321 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 LGALS7P47929 136 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 F2RL1P55085 397 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 OR2B8PP59922 312 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 GRB2P62993 217 aaKnown RBP0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 CDK16Q00536 496 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 PSG6Q00889 435 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 MS4A2Q01362 244 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 CBFBQ13951 182 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 CEACAM7Q14002 265 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 ZNF273Q14593 569 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 MELKQ14680 651 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 PDK2Q15119 407 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 MRPL23Q16540 153 aaKnown RBP0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 PPP6R3Q5H9R7 873 aaPredicted RBP0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 RPS26P11Q5JNZ5 115 aaPredicted RBP0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 EEF1AKMT2Q5JPI9 291 aaKnown RBP0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 LCE1BQ5T7P3 118 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 AADACL4Q5VUY2 407 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 NXNL2Q5VZ03 156 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 ERICH6BQ5W0A0 696 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 STUMQ69YW2 141 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 OR52E8Q6IFG1 317 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 PRR27Q6MZM9 219 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 ARCQ7LC44 396 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 HSD17B13Q7Z5P4 300 aaPredicted RBP0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 MTERF4Q7Z6M4 381 aaKnown RBP0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 TMEM139Q8IV31 216 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 NUDCD3Q8IVD9 361 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 NELFCDQ8IXH7 590 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 NRMQ8IXM6 262 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 CCDC65Q8IXS2 484 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 SMC5Q8IY18 1101 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 C20orf196Q8IYI0 205 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 KRT222Q8N1A0 295 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 MSANTD4Q8NCY6 345 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 CCNYQ8ND76 341 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 LFNGQ8NES3 379 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 OR9A2Q8NGT5 310 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 OR5W2Q8NH69 310 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 SPRYD4Q8WW59 207 aaPredicted RBP0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 CNRIP1Q96F85 164 aaPredicted RBP0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 APOPT1Q96IL0 206 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 TEX37Q96LM6 180 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 ZNF714Q96N38 554 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 OR2A7Q96R45 310 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 MBOAT4Q96T53 435 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 SEPHS2Q99611 448 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 TMEM208Q9BTX3 173 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 TAPBPLQ9BX59 468 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 TMEM120AQ9BXJ8 343 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 QTRT1Q9BXR0 403 aaKnown RBP0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 OSBPL8Q9BZF1 889 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 NT5DC2Q9H857 520 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 UBQLN4Q9NRR5 601 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 DUSP22Q9NRW4 184 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 LINC00474Q9P2X8 69 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 CHRNA9Q9UGM1 479 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 ZNF639Q9UID6 485 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 PSME2Q9UL46 239 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 UFC1Q9Y3C8 167 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 DYRK1BQ9Y463 629 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 PCDHA9Q9Y5H5 950 aa0.37□□□□□ -2.35
RNU6-42P-201ENST00000384165 IGKV2D-26A0A0A0MRZ7 120 aa0.36□□□□□ -2.35
RNU6-42P-201ENST00000384165 IGHV7-81A0A0B4J1V7 117 aa0.36□□□□□ -2.35
RNU6-42P-201ENST00000384165 TRBV5-4A0A0C4DH59 114 aa0.36□□□□□ -2.35
RNU6-42P-201ENST00000384165 hADV38S2A0JD32 116 aa0.36□□□□□ -2.35
RNU6-42P-201ENST00000384165 PRAMEF27A3QJZ7 478 aa0.36□□□□□ -2.35
RNU6-42P-201ENST00000384165 RPL37AP8A6NKH3 93 aa0.36□□□□□ -2.35
RNU6-42P-201ENST00000384165 KNCNA6PVL3 124 aa0.36□□□□□ -2.35
RNU6-42P-201ENST00000384165 GGTLC3B5MD39 225 aa0.36□□□□□ -2.35
RNU6-42P-201ENST00000384165 MCIDASD6RGH6 385 aa0.36□□□□□ -2.35
RNU6-42P-201ENST00000384165 FNDC10F2Z333 226 aa0.36□□□□□ -2.35
RNU6-42P-201ENST00000384165 K7EMT4 169 aa0.36□□□□□ -2.35
RNU6-42P-201ENST00000384165 ETV2O00321 342 aaPredicted RBP0.36□□□□□ -2.35
RNU6-42P-201ENST00000384165 SLC1A7O00341 560 aa0.36□□□□□ -2.35
RNU6-42P-201ENST00000384165 MAGEB4O15481 346 aaPredicted RBP0.36□□□□□ -2.35
RNU6-42P-201ENST00000384165 OR1I1O60431 355 aa0.36□□□□□ -2.35
RNU6-42P-201ENST00000384165 NME6O75414 186 aaPredicted RBP0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms