RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 ASCC3Q8N3C0 2202 aaKnown RBP13.16□□□□□ -0.3
VLDLR-202ENST00000382099 SLC16A7O60669 478 aa13.15□□□□□ -0.3
VLDLR-202ENST00000382099 LILRA1O75019 489 aa13.15□□□□□ -0.3
VLDLR-202ENST00000382099 MPZL1O95297 269 aa13.15□□□□□ -0.3
VLDLR-202ENST00000382099 BCL2P10415 239 aa13.15□□□□□ -0.3
VLDLR-202ENST00000382099 TEX43Q6ZNM6 134 aa13.15□□□□□ -0.3
VLDLR-202ENST00000382099 SLC22A24Q8N4F4 322 aa13.15□□□□□ -0.3
VLDLR-202ENST00000382099 STARD4Q96DR4 205 aa13.15□□□□□ -0.3
VLDLR-202ENST00000382099 LYRM2Q9NU23 88 aaPredicted RBP13.15□□□□□ -0.3
VLDLR-202ENST00000382099 LRP12Q9Y561 859 aa13.15□□□□□ -0.3
VLDLR-202ENST00000382099 TRAV39A0A0B4J263 110 aa13.15□□□□□ -0.3
VLDLR-202ENST00000382099 HIDE1A8MVS5 230 aa13.15□□□□□ -0.3
VLDLR-202ENST00000382099 HRASP01112 189 aa13.15□□□□□ -0.3
VLDLR-202ENST00000382099 SOD2P04179 222 aa13.15□□□□□ -0.3
VLDLR-202ENST00000382099 IGFBP3P17936 291 aaPredicted RBP13.15□□□□□ -0.3
VLDLR-202ENST00000382099 ZNF74Q16587 644 aa13.15□□□□□ -0.3
VLDLR-202ENST00000382099 C1orf100Q5SVJ3 147 aa13.15□□□□□ -0.3
VLDLR-202ENST00000382099 FAM78BQ5VT40 261 aa13.15□□□□□ -0.3
VLDLR-202ENST00000382099 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.15□□□□□ -0.3
VLDLR-202ENST00000382099 ZNF547Q8IVP9 402 aa13.15□□□□□ -0.3
VLDLR-202ENST00000382099 MEGF9Q9H1U4 602 aa13.15□□□□□ -0.3
VLDLR-202ENST00000382099 UQCR10Q9UDW1 63 aa13.15□□□□□ -0.3
VLDLR-202ENST00000382099 RNF115Q9Y4L5 304 aa13.15□□□□□ -0.3
VLDLR-202ENST00000382099 LOC101059948A0A1B0GTJ6 334 aa13.15□□□□□ -0.31
VLDLR-202ENST00000382099 ZNF814B7Z6K7 855 aa13.15□□□□□ -0.31
VLDLR-202ENST00000382099 SSSCA1O60232 199 aa13.15□□□□□ -0.31
VLDLR-202ENST00000382099 GDF9O60383 454 aa13.15□□□□□ -0.31
VLDLR-202ENST00000382099 SELPP16109 830 aa13.15□□□□□ -0.31
VLDLR-202ENST00000382099 ZNF93P35789 620 aaPredicted RBP13.15□□□□□ -0.31
VLDLR-202ENST00000382099 DEFB103AP81534 67 aa13.15□□□□□ -0.31
VLDLR-202ENST00000382099 SHHQ15465 462 aa13.15□□□□□ -0.31
VLDLR-202ENST00000382099 C1orf140Q5VVS0 124 aa13.15□□□□□ -0.31
VLDLR-202ENST00000382099 RNF144BQ7Z419 303 aa13.15□□□□□ -0.31
VLDLR-202ENST00000382099 WDFY1Q8IWB7 410 aa13.15□□□□□ -0.31
VLDLR-202ENST00000382099 OR52R1Q8NGF1 315 aa13.15□□□□□ -0.31
VLDLR-202ENST00000382099 OR5D18Q8NGL1 313 aa13.15□□□□□ -0.31
VLDLR-202ENST00000382099 PTX4Q96A99 478 aa13.15□□□□□ -0.31
VLDLR-202ENST00000382099 OR6C1Q96RD1 312 aa13.15□□□□□ -0.31
VLDLR-202ENST00000382099 GABRG3Q99928 467 aa13.15□□□□□ -0.31
VLDLR-202ENST00000382099 TMEM59Q9BXS4 323 aa13.15□□□□□ -0.31
VLDLR-202ENST00000382099 RYDENQ9NUL5 291 aaKnown RBP13.15□□□□□ -0.31
VLDLR-202ENST00000382099 SLC5A6Q9Y289 635 aa13.15□□□□□ -0.31
VLDLR-202ENST00000382099 COL4A3Q01955 1670 aa13.14□□□□□ -0.31
VLDLR-202ENST00000382099 LRRC3CA6NJW4 275 aa13.14□□□□□ -0.31
VLDLR-202ENST00000382099 TAS2R46P59540 309 aa13.14□□□□□ -0.31
VLDLR-202ENST00000382099 FAM53BQ14153 422 aa13.14□□□□□ -0.31
VLDLR-202ENST00000382099 DEFB134Q4QY38 66 aa13.14□□□□□ -0.31
VLDLR-202ENST00000382099 C9orf50Q5SZB4 431 aa13.14□□□□□ -0.31
VLDLR-202ENST00000382099 METRNLQ641Q3 311 aa13.14□□□□□ -0.31
VLDLR-202ENST00000382099 Q6ZNB5 142 aa13.14□□□□□ -0.31
VLDLR-202ENST00000382099 NAT8Q9UHE5 227 aa13.14□□□□□ -0.31
VLDLR-202ENST00000382099 LSM7Q9UK45 103 aaKnown RBP13.14□□□□□ -0.31
VLDLR-202ENST00000382099 NPIPA2E9PIF3 369 aa13.14□□□□□ -0.31
VLDLR-202ENST00000382099 K7ERU9 68 aa13.14□□□□□ -0.31
VLDLR-202ENST00000382099 GALR2O43603 387 aaPredicted RBP13.14□□□□□ -0.31
VLDLR-202ENST00000382099 OPN1LWP04000 364 aa13.14□□□□□ -0.31
VLDLR-202ENST00000382099 TNFSF4P23510 183 aa13.14□□□□□ -0.31
VLDLR-202ENST00000382099 DUSP1P28562 367 aa13.14□□□□□ -0.31
VLDLR-202ENST00000382099 DYNLT3P51808 116 aa13.14□□□□□ -0.31
VLDLR-202ENST00000382099 AMZ2Q86W34 360 aa13.14□□□□□ -0.31
VLDLR-202ENST00000382099 BAGE3Q86Y29 109 aa13.14□□□□□ -0.31
VLDLR-202ENST00000382099 BAGE2Q86Y30 109 aa13.14□□□□□ -0.31
VLDLR-202ENST00000382099 TMEM25Q86YD3 366 aa13.14□□□□□ -0.31
VLDLR-202ENST00000382099 OR4N2Q8NGD1 307 aa13.14□□□□□ -0.31
VLDLR-202ENST00000382099 ABHD6Q9BV23 337 aa13.14□□□□□ -0.31
VLDLR-202ENST00000382099 DNAJB12Q9NXW2 375 aaKnown RBP13.14□□□□□ -0.31
VLDLR-202ENST00000382099 HSPB7Q9UBY9 170 aa13.14□□□□□ -0.31
VLDLR-202ENST00000382099 YLPM1P49750 1951 aaKnown RBP13.14□□□□□ -0.31
VLDLR-202ENST00000382099 LINC01553A4QN01 128 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 TNFRSF10CO14798 259 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 LATO43561 262 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 CDS2O95674 445 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 HOXB2P14652 356 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 CST5P28325 142 aaPredicted RBP13.13□□□□□ -0.31
VLDLR-202ENST00000382099 RAB28P51157 221 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 IL13RA2Q14627 380 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 OR4A47Q6IF82 309 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 LHFPL4Q7Z7J7 247 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 LINC00346Q8IVM7 164 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 CDRT4Q8N9R6 151 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 VN1R2Q8NFZ6 395 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 OR5AU1Q8NGC0 362 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 OR51T1Q8NGJ9 327 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 TMEM171Q8WVE6 324 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 OR10A5Q9H207 317 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 NXT1Q9UKK6 140 aaKnown RBP13.13□□□□□ -0.31
VLDLR-202ENST00000382099 IGHV2-70DA0A0C4DH43 119 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 IGSF23A1L1A6 192 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 BPNT1O95861 308 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 CSTAP01040 98 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 EFNA3P52797 238 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 RPL18Q07020 188 aaKnown RBP13.13□□□□□ -0.31
VLDLR-202ENST00000382099 OR2D3Q8NGH3 330 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 TSPAN32Q96QS1 320 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 A0A0A6YYD4 124 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 DIRC3C9JPN6 131 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 CTSVO60911 334 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 TMEM225BP0DP42 221 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 ARF3P61204 181 aaPredicted RBP13.13□□□□□ -0.31
VLDLR-202ENST00000382099 ARF1P84077 181 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms