RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 OR4P4Q8NGL7 312 aa12.78□□□□□ -0.36
VCX3A-201ENST00000381089 SLAMF9Q96A28 289 aa12.78□□□□□ -0.36
VCX3A-201ENST00000381089 MCRIP2Q9BUT9 160 aaKnown RBP12.78□□□□□ -0.36
VCX3A-201ENST00000381089 GAL3ST2Q9H3Q3 398 aa12.78□□□□□ -0.36
VCX3A-201ENST00000381089 C8orf4Q9NR00 106 aa12.78□□□□□ -0.36
VCX3A-201ENST00000381089 INPP5EQ9NRR6 644 aa12.78□□□□□ -0.36
VCX3A-201ENST00000381089 MTCH1Q9NZJ7 389 aa12.78□□□□□ -0.36
VCX3A-201ENST00000381089 H2AFY2Q9P0M6 372 aaPredicted RBP12.78□□□□□ -0.36
VCX3A-201ENST00000381089 UBE2J1Q9Y385 318 aaPredicted RBP12.78□□□□□ -0.36
VCX3A-201ENST00000381089 PCDHGB5Q9Y5G0 923 aa12.78□□□□□ -0.36
VCX3A-201ENST00000381089 DNAH9Q9NYC9 4486 aa12.78□□□□□ -0.36
VCX3A-201ENST00000381089 A0A1B0GTI1 187 aa12.77□□□□□ -0.37
VCX3A-201ENST00000381089 TMEM82A0PJX8 343 aa12.77□□□□□ -0.37
VCX3A-201ENST00000381089 CCDC182A6NF36 153 aa12.77□□□□□ -0.37
VCX3A-201ENST00000381089 LEUTXA8MZ59 168 aa12.77□□□□□ -0.37
VCX3A-201ENST00000381089 ZNF670-ZNF695F2Z2N8 137 aa12.77□□□□□ -0.37
VCX3A-201ENST00000381089 MGST3O14880 152 aa12.77□□□□□ -0.37
VCX3A-201ENST00000381089 PRKYO43930 277 aa12.77□□□□□ -0.37
VCX3A-201ENST00000381089 SRSF10O75494 262 aaKnown RBP12.77□□□□□ -0.37
VCX3A-201ENST00000381089 OR2F2O95006 317 aa12.77□□□□□ -0.37
VCX3A-201ENST00000381089 HOXD3P31249 432 aaPredicted RBP12.77□□□□□ -0.37
VCX3A-201ENST00000381089 C12orf73Q69YU5 71 aa12.77□□□□□ -0.37
VCX3A-201ENST00000381089 SLC35F2Q8IXU6 374 aa12.77□□□□□ -0.37
VCX3A-201ENST00000381089 ABHD12Q8N2K0 398 aa12.77□□□□□ -0.37
VCX3A-201ENST00000381089 TPRX1Q8N7U7 411 aa12.77□□□□□ -0.37
VCX3A-201ENST00000381089 CCDC54Q8NEL0 328 aa12.77□□□□□ -0.37
VCX3A-201ENST00000381089 CYGBQ8WWM9 190 aa12.77□□□□□ -0.37
VCX3A-201ENST00000381089 BORCS8Q96FH0 119 aa12.77□□□□□ -0.37
VCX3A-201ENST00000381089 RBM14Q96PK6 669 aaKnown RBP12.77□□□□□ -0.37
VCX3A-201ENST00000381089 IL4I1Q96RQ9 567 aa12.77□□□□□ -0.37
VCX3A-201ENST00000381089 APOL4Q9BPW4 351 aa12.77□□□□□ -0.37
VCX3A-201ENST00000381089 ADI1Q9BV57 179 aa12.77□□□□□ -0.37
VCX3A-201ENST00000381089 CHST6Q9GZX3 395 aa12.77□□□□□ -0.37
VCX3A-201ENST00000381089 SEBOXQ9HB31 216 aaPredicted RBP12.77□□□□□ -0.37
VCX3A-201ENST00000381089 GMPPBQ9Y5P6 360 aa12.77□□□□□ -0.37
VCX3A-201ENST00000381089 TRGV10A0A0A0MS01 117 aa12.76□□□□□ -0.37
VCX3A-201ENST00000381089 FUOMA2VDF0 154 aa12.76□□□□□ -0.37
VCX3A-201ENST00000381089 SYT7O43581 403 aa12.76□□□□□ -0.37
VCX3A-201ENST00000381089 INMTO95050 263 aa12.76□□□□□ -0.37
VCX3A-201ENST00000381089 CCL1P22362 96 aa12.76□□□□□ -0.37
VCX3A-201ENST00000381089 MNDAP41218 407 aa12.76□□□□□ -0.37
VCX3A-201ENST00000381089 AQP4P55087 323 aa12.76□□□□□ -0.37
VCX3A-201ENST00000381089 BDH1Q02338 343 aa12.76□□□□□ -0.37
VCX3A-201ENST00000381089 C9orf152Q5JTZ5 239 aa12.76□□□□□ -0.37
VCX3A-201ENST00000381089 UNQ9370/PRO34162Q6UXP9 181 aa12.76□□□□□ -0.37
VCX3A-201ENST00000381089 Q6ZSR3 168 aa12.76□□□□□ -0.37
VCX3A-201ENST00000381089 SLC25A26Q70HW3 274 aa12.76□□□□□ -0.37
VCX3A-201ENST00000381089 OSR2Q8N2R0 312 aa12.76□□□□□ -0.37
VCX3A-201ENST00000381089 TCEANCQ8N8B7 351 aa12.76□□□□□ -0.37
VCX3A-201ENST00000381089 LINC00482Q8N8I6 264 aa12.76□□□□□ -0.37
VCX3A-201ENST00000381089 ZNF555Q8NEP9 628 aa12.76□□□□□ -0.37
VCX3A-201ENST00000381089 ZNF649Q9BS31 505 aa12.76□□□□□ -0.37
VCX3A-201ENST00000381089 VCX3BQ9H321 246 aa12.76□□□□□ -0.37
VCX3A-201ENST00000381089 FAM118AQ9NWS6 357 aa12.76□□□□□ -0.37
VCX3A-201ENST00000381089 IMPAD1Q9NX62 359 aa12.76□□□□□ -0.37
VCX3A-201ENST00000381089 F8VVB4 439 aa12.75□□□□□ -0.37
VCX3A-201ENST00000381089 F8VWA3 439 aa12.75□□□□□ -0.37
VCX3A-201ENST00000381089 TOR1AO14656 332 aa12.75□□□□□ -0.37
VCX3A-201ENST00000381089 IGHA1P01876 353 aa12.75□□□□□ -0.37
VCX3A-201ENST00000381089 KRT8P05787 483 aa12.75□□□□□ -0.37
VCX3A-201ENST00000381089 CD24P25063 80 aa12.75□□□□□ -0.37
VCX3A-201ENST00000381089 ERP29P30040 261 aaKnown RBP12.75□□□□□ -0.37
VCX3A-201ENST00000381089 CDC42P60953 191 aa12.75□□□□□ -0.37
VCX3A-201ENST00000381089 CCDC144NLQ6NUI1 221 aa12.75□□□□□ -0.37
VCX3A-201ENST00000381089 PLEKHG7Q6ZR37 379 aa12.75□□□□□ -0.37
VCX3A-201ENST00000381089 MEPCEQ7L2J0 689 aaKnown RBP12.75□□□□□ -0.37
VCX3A-201ENST00000381089 BCDIN3DQ7Z5W3 292 aaKnown RBP12.75□□□□□ -0.37
VCX3A-201ENST00000381089 RDH12Q96NR8 316 aa12.75□□□□□ -0.37
VCX3A-201ENST00000381089 CLN6Q9NWW5 311 aa12.75□□□□□ -0.37
VCX3A-201ENST00000381089 LOC100130705A0A1B0GUX0 176 aa12.74□□□□□ -0.37
VCX3A-201ENST00000381089 PSMB11A5LHX3 300 aa12.74□□□□□ -0.37
VCX3A-201ENST00000381089 RPP14O95059 124 aaKnown RBP12.74□□□□□ -0.37
VCX3A-201ENST00000381089 SLC6A1P30531 599 aa12.74□□□□□ -0.37
VCX3A-201ENST00000381089 ATP1B3P54709 279 aa12.74□□□□□ -0.37
VCX3A-201ENST00000381089 P2RX3P56373 397 aa12.74□□□□□ -0.37
VCX3A-201ENST00000381089 ZNF91Q05481 1191 aa12.74□□□□□ -0.37
VCX3A-201ENST00000381089 UBE2V2Q15819 145 aa12.74□□□□□ -0.37
VCX3A-201ENST00000381089 ODF4Q2M2E3 257 aa12.74□□□□□ -0.37
VCX3A-201ENST00000381089 SPIN3Q5JUX0 258 aa12.74□□□□□ -0.37
VCX3A-201ENST00000381089 PRAMEF5Q5TYX0 476 aa12.74□□□□□ -0.37
VCX3A-201ENST00000381089 IZUMO2Q6UXV1 221 aa12.74□□□□□ -0.37
VCX3A-201ENST00000381089 HEPN1Q6WQI6 88 aa12.74□□□□□ -0.37
VCX3A-201ENST00000381089 MRPL41Q8IXM3 137 aaKnown RBP12.74□□□□□ -0.37
VCX3A-201ENST00000381089 FAM58AQ8N1B3 248 aa12.74□□□□□ -0.37
VCX3A-201ENST00000381089 YIPF7Q8N8F6 280 aa12.74□□□□□ -0.37
VCX3A-201ENST00000381089 OR52N4Q8NGI2 321 aa12.74□□□□□ -0.37
VCX3A-201ENST00000381089 TMEM163Q8TC26 289 aa12.74□□□□□ -0.37
VCX3A-201ENST00000381089 C10orf35Q96D05 121 aa12.74□□□□□ -0.37
VCX3A-201ENST00000381089 CHST5Q9GZS9 411 aa12.74□□□□□ -0.37
VCX3A-201ENST00000381089 MRM2Q9UI43 246 aaKnown RBP12.74□□□□□ -0.37
VCX3A-201ENST00000381089 TRBV2A0A0J9YWF9 115 aa12.73□□□□□ -0.37
VCX3A-201ENST00000381089 OOSP1A8MZH6 123 aa12.73□□□□□ -0.37
VCX3A-201ENST00000381089 MAGEB4O15481 346 aaPredicted RBP12.73□□□□□ -0.37
VCX3A-201ENST00000381089 PSPNO60542 156 aa12.73□□□□□ -0.37
VCX3A-201ENST00000381089 FAM106CPP0CH98 169 aa12.73□□□□□ -0.37
VCX3A-201ENST00000381089 CDK2P24941 298 aa12.73□□□□□ -0.37
VCX3A-201ENST00000381089 RBP2P50120 134 aa12.73□□□□□ -0.37
VCX3A-201ENST00000381089 PRRX1P54821 245 aa12.73□□□□□ -0.37
VCX3A-201ENST00000381089 ZNF146Q15072 292 aa12.73□□□□□ -0.37
VCX3A-201ENST00000381089 NXNL2Q5VZ03 156 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms