RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 WNT3P56703 355 aa9.64□□□□□ -0.87
LINC00654-201ENST00000379053 LSM6P62312 80 aaKnown RBP9.64□□□□□ -0.87
LINC00654-201ENST00000379053 SLC38A11Q08AI6 406 aa9.64□□□□□ -0.87
LINC00654-201ENST00000379053 ZBTB37Q5TC79 503 aa9.64□□□□□ -0.87
LINC00654-201ENST00000379053 DOLPP1Q86YN1 238 aa9.64□□□□□ -0.87
LINC00654-201ENST00000379053 OR2M3Q8NG83 312 aa9.64□□□□□ -0.87
LINC00654-201ENST00000379053 OR8B12Q8NGG6 310 aa9.64□□□□□ -0.87
LINC00654-201ENST00000379053 CACNG5Q9UF02 275 aa9.64□□□□□ -0.87
LINC00654-201ENST00000379053 SLC45A2Q9UMX9 530 aa9.64□□□□□ -0.87
LINC00654-201ENST00000379053 OOEPA6NGQ2 149 aa9.64□□□□□ -0.87
LINC00654-201ENST00000379053 CBY3A6NI87 242 aa9.64□□□□□ -0.87
LINC00654-201ENST00000379053 MOSPD3O75425 235 aa9.64□□□□□ -0.87
LINC00654-201ENST00000379053 MMDQ15546 238 aa9.64□□□□□ -0.87
LINC00654-201ENST00000379053 ETFDHQ16134 617 aa9.64□□□□□ -0.87
LINC00654-201ENST00000379053 CLEC12BQ2HXU8 276 aa9.64□□□□□ -0.87
LINC00654-201ENST00000379053 FFAR4Q5NUL3 377 aa9.64□□□□□ -0.87
LINC00654-201ENST00000379053 C12orf73Q69YU5 71 aa9.64□□□□□ -0.87
LINC00654-201ENST00000379053 LRRTM1Q86UE6 522 aa9.64□□□□□ -0.87
LINC00654-201ENST00000379053 MDP1Q86V88 176 aa9.64□□□□□ -0.87
LINC00654-201ENST00000379053 OR1B1Q8NGR6 318 aa9.64□□□□□ -0.87
LINC00654-201ENST00000379053 KCNK17Q96T54 332 aa9.64□□□□□ -0.87
LINC00654-201ENST00000379053 TMEM231Q9H6L2 316 aa9.64□□□□□ -0.87
LINC00654-201ENST00000379053 ZMIZ1Q9ULJ6 1067 aa9.64□□□□□ -0.87
LINC00654-201ENST00000379053 ASXL3Q9C0F0 2248 aa9.64□□□□□ -0.87
LINC00654-201ENST00000379053 TRIM77I1YAP6 450 aa9.64□□□□□ -0.87
LINC00654-201ENST00000379053 ZFPL1O95159 310 aa9.64□□□□□ -0.87
LINC00654-201ENST00000379053 CPN1P15169 458 aa9.64□□□□□ -0.87
LINC00654-201ENST00000379053 PSG6Q00889 435 aa9.64□□□□□ -0.87
LINC00654-201ENST00000379053 NCR3LG1Q68D85 454 aa9.64□□□□□ -0.87
LINC00654-201ENST00000379053 RBPMS2Q6ZRY4 209 aaKnown RBP9.64□□□□□ -0.87
LINC00654-201ENST00000379053 TMEM272A0A1B0GTI8 110 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 HRKO00198 91 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 GZMHP20718 246 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 DIRC2Q96SL1 478 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 ABHD14AQ9BUJ0 271 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 SF3B6Q9Y3B4 125 aaKnown RBP9.63□□□□□ -0.87
LINC00654-201ENST00000379053 LIPGQ9Y5X9 500 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 C3orf85A0A1B0GTC6 90 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 J3KRW8 73 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 CD160O95971 181 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 FA2HQ7L5A8 372 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 PPP1R1CQ8WVI7 109 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 LRRC3BQ96PB8 259 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 RASL12Q9NYN1 266 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 TMED3Q9Y3Q3 217 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 YTHDF2Q9Y5A9 579 aaKnown RBP9.63□□□□□ -0.87
LINC00654-201ENST00000379053 ADRA2AP08913 450 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 PGA3P0DJD8 388 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 OR5M8Q8NGP6 311 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 SMIM4Q8WVI0 70 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 ZNF501Q96CX3 271 aaPredicted RBP9.63□□□□□ -0.87
LINC00654-201ENST00000379053 CISD1Q9NZ45 108 aaKnown RBP9.63□□□□□ -0.87
LINC00654-201ENST00000379053 SLC25A10Q9UBX3 287 aaPredicted RBP9.63□□□□□ -0.87
LINC00654-201ENST00000379053 PILRBQ9UKJ0 227 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 ARL2-SNX15V9GYD0 113 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 A0A0A6YYJ9 748 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 LOC102723971A0A1B0GUV8 181 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 SNRPGP15A8MWD9 76 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 TGFBR1P36897 503 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 KIAA0040Q15053 153 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 BAP18Q8IXM2 172 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 TCTE3Q8IZS6 198 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 MYH14Q7Z406 1995 aaKnown RBP9.63□□□□□ -0.87
LINC00654-201ENST00000379053 TO15178 435 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 NTN1O95631 604 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 TPPP2P59282 170 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 RAB40CQ96S21 281 aa9.63□□□□□ -0.87
LINC00654-201ENST00000379053 A0A1B0GUL6 1792 aa9.62□□□□□ -0.87
LINC00654-201ENST00000379053 PF4P02776 101 aa9.62□□□□□ -0.87
LINC00654-201ENST00000379053 RAB5AP20339 215 aa9.62□□□□□ -0.87
LINC00654-201ENST00000379053 FOXL2P58012 376 aa9.62□□□□□ -0.87
LINC00654-201ENST00000379053 SLC35B1P78383 322 aa9.62□□□□□ -0.87
LINC00654-201ENST00000379053 CDK5Q00535 292 aa9.62□□□□□ -0.87
LINC00654-201ENST00000379053 COL19A1Q14993 1142 aa9.62□□□□□ -0.87
LINC00654-201ENST00000379053 OR52B4Q8NGK2 314 aa9.62□□□□□ -0.87
LINC00654-201ENST00000379053 NUDT16L1Q9BRJ7 211 aaKnown RBP9.62□□□□□ -0.87
LINC00654-201ENST00000379053 GPR27Q9NS67 375 aa9.62□□□□□ -0.87
LINC00654-201ENST00000379053 C9orf40Q8IXQ3 194 aa9.62□□□□□ -0.87
LINC00654-201ENST00000379053 SIGLECL1Q8N7X8 197 aa9.62□□□□□ -0.87
LINC00654-201ENST00000379053 FLYWCH2Q96CP2 140 aaKnown RBP9.62□□□□□ -0.87
LINC00654-201ENST00000379053 R3HDM4Q96D70 268 aa9.62□□□□□ -0.87
LINC00654-201ENST00000379053 SLC17A5Q9NRA2 495 aa9.62□□□□□ -0.87
LINC00654-201ENST00000379053 ICE1Q9Y2F5 2266 aa9.62□□□□□ -0.87
LINC00654-201ENST00000379053 AHRRA9YTQ3 701 aa9.62□□□□□ -0.87
LINC00654-201ENST00000379053 J3QT63 122 aa9.62□□□□□ -0.87
LINC00654-201ENST00000379053 IGHA1P01876 353 aa9.62□□□□□ -0.87
LINC00654-201ENST00000379053 IGHA2P01877 340 aa9.62□□□□□ -0.87
LINC00654-201ENST00000379053 RPL13AP40429 203 aaKnown RBP9.62□□□□□ -0.87
LINC00654-201ENST00000379053 FAM219BQ5XKK7 198 aa9.62□□□□□ -0.87
LINC00654-201ENST00000379053 FAM214BQ7L5A3 538 aa9.62□□□□□ -0.87
LINC00654-201ENST00000379053 ATG4DQ86TL0 474 aaPredicted RBP9.62□□□□□ -0.87
LINC00654-201ENST00000379053 TMEM251Q8N6I4 163 aa9.62□□□□□ -0.87
LINC00654-201ENST00000379053 GHITMQ9H3K2 345 aa9.62□□□□□ -0.87
LINC00654-201ENST00000379053 TMEM38BQ9NVV0 291 aa9.62□□□□□ -0.87
LINC00654-201ENST00000379053 LPAR3Q9UBY5 353 aa9.62□□□□□ -0.87
LINC00654-201ENST00000379053 EPOPA6NHQ4 379 aa9.62□□□□□ -0.87
LINC00654-201ENST00000379053 RFPL4AA6NLU0 287 aa9.62□□□□□ -0.87
LINC00654-201ENST00000379053 RFPL4AL1F8VTS6 287 aa9.62□□□□□ -0.87
LINC00654-201ENST00000379053 BCL3P20749 454 aa9.62□□□□□ -0.87
LINC00654-201ENST00000379053 RPL31P62899 125 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms