RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 PLAC9Q5JTB6 97 aa13.22□□□□□ -0.29
CCDC107-204ENST00000378409 TEX36Q5VZQ5 186 aa13.22□□□□□ -0.29
CCDC107-204ENST00000378409 Q6P435 159 aa13.22□□□□□ -0.29
CCDC107-204ENST00000378409 Q6ZTK2 550 aa13.22□□□□□ -0.29
CCDC107-204ENST00000378409 C6orf201Q7Z4U5 140 aa13.22□□□□□ -0.29
CCDC107-204ENST00000378409 PEG10Q86TG7 708 aaKnown RBP13.22□□□□□ -0.29
CCDC107-204ENST00000378409 SNX29P2Q8IUI4 249 aa13.22□□□□□ -0.29
CCDC107-204ENST00000378409 OR4M2Q8NGB6 313 aa13.22□□□□□ -0.29
CCDC107-204ENST00000378409 NUDT16L1Q9BRJ7 211 aaKnown RBP13.22□□□□□ -0.29
CCDC107-204ENST00000378409 CHODLQ9H9P2 273 aa13.22□□□□□ -0.29
CCDC107-204ENST00000378409 ZMAT3Q9HA38 289 aaKnown RBP13.22□□□□□ -0.29
CCDC107-204ENST00000378409 PLEKHJ1Q9NW61 149 aa13.22□□□□□ -0.29
CCDC107-204ENST00000378409 ABCA12Q86UK0 2595 aa13.21□□□□□ -0.29
CCDC107-204ENST00000378409 IGKV1D-17A0A075B6S4 117 aa13.21□□□□□ -0.29
CCDC107-204ENST00000378409 H3BUI4 141 aa13.21□□□□□ -0.29
CCDC107-204ENST00000378409 HSPB6O14558 160 aa13.21□□□□□ -0.29
CCDC107-204ENST00000378409 PPIHO43447 177 aaKnown RBP13.21□□□□□ -0.29
CCDC107-204ENST00000378409 SSX4O60224 188 aa13.21□□□□□ -0.29
CCDC107-204ENST00000378409 GYPAP02724 150 aa13.21□□□□□ -0.29
CCDC107-204ENST00000378409 INHBBP09529 407 aa13.21□□□□□ -0.29
CCDC107-204ENST00000378409 HIST1H1DP16402 221 aaKnown RBP13.21□□□□□ -0.29
CCDC107-204ENST00000378409 FUT3P21217 361 aa13.21□□□□□ -0.29
CCDC107-204ENST00000378409 PRDX2P32119 198 aa13.21□□□□□ -0.29
CCDC107-204ENST00000378409 PTH2RP49190 550 aa13.21□□□□□ -0.29
CCDC107-204ENST00000378409 ATP5J2P56134 94 aa13.21□□□□□ -0.29
CCDC107-204ENST00000378409 BTG1P62324 171 aa13.21□□□□□ -0.29
CCDC107-204ENST00000378409 ZNF45Q02386 682 aa13.21□□□□□ -0.29
CCDC107-204ENST00000378409 ZNF846Q147U1 533 aa13.21□□□□□ -0.29
CCDC107-204ENST00000378409 ZMYND11Q15326 602 aa13.21□□□□□ -0.29
CCDC107-204ENST00000378409 CDNFQ49AH0 187 aa13.21□□□□□ -0.29
CCDC107-204ENST00000378409 PYDC2Q56P42 97 aa13.21□□□□□ -0.29
CCDC107-204ENST00000378409 STUMQ69YW2 141 aa13.21□□□□□ -0.29
CCDC107-204ENST00000378409 BRICD5Q6PL45 260 aa13.21□□□□□ -0.29
CCDC107-204ENST00000378409 ANGPTL6Q8NI99 470 aa13.21□□□□□ -0.29
CCDC107-204ENST00000378409 PERPQ96FX8 193 aa13.21□□□□□ -0.29
CCDC107-204ENST00000378409 TIMD4Q96H15 378 aa13.21□□□□□ -0.29
CCDC107-204ENST00000378409 ABHD1Q96SE0 405 aa13.21□□□□□ -0.29
CCDC107-204ENST00000378409 SOSTQ9BQB4 213 aa13.21□□□□□ -0.29
CCDC107-204ENST00000378409 PECRQ9BY49 303 aa13.21□□□□□ -0.29
CCDC107-204ENST00000378409 WDR12Q9GZL7 423 aaKnown RBP13.21□□□□□ -0.29
CCDC107-204ENST00000378409 BARX1Q9HBU1 254 aaPredicted RBP13.21□□□□□ -0.29
CCDC107-204ENST00000378409 SPACA1Q9HBV2 294 aa13.21□□□□□ -0.29
CCDC107-204ENST00000378409 ZNF701Q9NV72 531 aaPredicted RBP13.21□□□□□ -0.29
CCDC107-204ENST00000378409 RABL2AQ9UBK7 228 aaPredicted RBP13.21□□□□□ -0.29
CCDC107-204ENST00000378409 EDARQ9UNE0 448 aa13.21□□□□□ -0.29
CCDC107-204ENST00000378409 RABL2BQ9UNT1 228 aa13.21□□□□□ -0.29
CCDC107-204ENST00000378409 CELSR2Q9HCU4 2923 aa13.21□□□□□ -0.3
CCDC107-204ENST00000378409 DOCK11Q5JSL3 2073 aa13.2□□□□□ -0.3
CCDC107-204ENST00000378409 NBPF19A0A087WUL8 3843 aa13.2□□□□□ -0.3
CCDC107-204ENST00000378409 ISPDA4D126 451 aa13.2□□□□□ -0.3
CCDC107-204ENST00000378409 TMEM235A6NFC5 223 aa13.2□□□□□ -0.3
CCDC107-204ENST00000378409 HLA-DQB1P01920 261 aa13.2□□□□□ -0.3
CCDC107-204ENST00000378409 PTHLHP12272 177 aa13.2□□□□□ -0.3
CCDC107-204ENST00000378409 PTBP1P26599 531 aaKnown RBP eCLIP13.2□□□□□ -0.3
CCDC107-204ENST00000378409 PITPNAQ00169 270 aa13.2□□□□□ -0.3
CCDC107-204ENST00000378409 COL10A1Q03692 680 aa13.2□□□□□ -0.3
CCDC107-204ENST00000378409 ZNF79Q15937 498 aa13.2□□□□□ -0.3
CCDC107-204ENST00000378409 ZNF260Q3ZCT1 412 aa13.2□□□□□ -0.3
CCDC107-204ENST00000378409 PAN3Q58A45 887 aaKnown RBP13.2□□□□□ -0.3
CCDC107-204ENST00000378409 AVPI1Q5T686 147 aa13.2□□□□□ -0.3
CCDC107-204ENST00000378409 OLFML2AQ68BL7 652 aa13.2□□□□□ -0.3
CCDC107-204ENST00000378409 PYHIN1Q6K0P9 492 aa13.2□□□□□ -0.3
CCDC107-204ENST00000378409 CD177Q8N6Q3 437 aa13.2□□□□□ -0.3
CCDC107-204ENST00000378409 ZNF525Q8N782 197 aa13.2□□□□□ -0.3
CCDC107-204ENST00000378409 ASCC1Q8N9N2 400 aaKnown RBP13.2□□□□□ -0.3
CCDC107-204ENST00000378409 SUMF2Q8NBJ7 301 aa13.2□□□□□ -0.3
CCDC107-204ENST00000378409 NEK7Q8TDX7 302 aa13.2□□□□□ -0.3
CCDC107-204ENST00000378409 CYYR1Q96J86 154 aa13.2□□□□□ -0.3
CCDC107-204ENST00000378409 SULT4A1Q9BR01 284 aa13.2□□□□□ -0.3
CCDC107-204ENST00000378409 DPCDQ9BVM2 203 aaPredicted RBP13.2□□□□□ -0.3
CCDC107-204ENST00000378409 AUNIPQ9H7T9 357 aa13.2□□□□□ -0.3
CCDC107-204ENST00000378409 IFT22Q9H7X7 185 aa13.2□□□□□ -0.3
CCDC107-204ENST00000378409 MYOZ1Q9NP98 299 aaPredicted RBP13.2□□□□□ -0.3
CCDC107-204ENST00000378409 RCC2Q9P258 522 aaKnown RBP13.2□□□□□ -0.3
CCDC107-204ENST00000378409 METRNQ9UJH8 293 aa13.2□□□□□ -0.3
CCDC107-204ENST00000378409 ZNF222Q9UK12 451 aa13.2□□□□□ -0.3
CCDC107-204ENST00000378409 HSF4Q9ULV5 492 aa13.2□□□□□ -0.3
CCDC107-204ENST00000378409 FBN2P35556 2912 aa13.19□□□□□ -0.3
CCDC107-204ENST00000378409 DSCAML1Q8TD84 2053 aa13.19□□□□□ -0.3
CCDC107-204ENST00000378409 TRAV24A0A0B4J272 114 aa13.19□□□□□ -0.3
CCDC107-204ENST00000378409 UBE2QL1A1L167 161 aa13.19□□□□□ -0.3
CCDC107-204ENST00000378409 NKX6-3A6NJ46 265 aa13.19□□□□□ -0.3
CCDC107-204ENST00000378409 MCRIP1C9JLW8 97 aa13.19□□□□□ -0.3
CCDC107-204ENST00000378409 SLC33A1O00400 549 aaPredicted RBP13.19□□□□□ -0.3
CCDC107-204ENST00000378409 MFNGO00587 321 aa13.19□□□□□ -0.3
CCDC107-204ENST00000378409 IGHV2-70P01814 119 aa13.19□□□□□ -0.3
CCDC107-204ENST00000378409 GSTP1P09211 210 aaKnown RBP13.19□□□□□ -0.3
CCDC107-204ENST00000378409 DNASE1P24855 282 aa13.19□□□□□ -0.3
CCDC107-204ENST00000378409 MDH2P40926 338 aaKnown RBP13.19□□□□□ -0.3
CCDC107-204ENST00000378409 KCNJ8Q15842 424 aa13.19□□□□□ -0.3
CCDC107-204ENST00000378409 RNASE12Q5GAN4 147 aaKnown RBP13.19□□□□□ -0.3
CCDC107-204ENST00000378409 C15orf40Q8WUR7 153 aa13.19□□□□□ -0.3
CCDC107-204ENST00000378409 ST8SIA4Q92187 359 aa13.19□□□□□ -0.3
CCDC107-204ENST00000378409 RAB1CQ92928 201 aa13.19□□□□□ -0.3
CCDC107-204ENST00000378409 GCDHQ92947 438 aaPredicted RBP13.19□□□□□ -0.3
CCDC107-204ENST00000378409 CCL13Q99616 98 aa13.19□□□□□ -0.3
CCDC107-204ENST00000378409 FAAP24Q9BTP7 215 aa13.19□□□□□ -0.3
CCDC107-204ENST00000378409 GSX2Q9BZM3 304 aa13.19□□□□□ -0.3
CCDC107-204ENST00000378409 TMEM165Q9HC07 324 aa13.19□□□□□ -0.3
CCDC107-204ENST00000378409 ELF5Q9UKW6 265 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms