RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 BCL2L10Q9HD36 194 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 SIPA1L1O43166 1804 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 OR5B21A6NL26 309 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 C11orf98E9PRG8 122 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 SOX1O00570 391 aaPredicted RBP10.42□□□□□ -0.74
NPHP4-202ENST00000378161 SRP14P37108 136 aaKnown RBP10.42□□□□□ -0.74
NPHP4-202ENST00000378161 CEACAM3P40198 252 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 GAS1P54826 345 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 CSNK1G2P78368 415 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 IHHQ14623 411 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 KIR2DS3Q14952 304 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 GDF7Q7Z4P5 450 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 LHFPL4Q7Z7J7 247 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 RTN4IP1Q8WWV3 396 aaPredicted RBP10.42□□□□□ -0.74
NPHP4-202ENST00000378161 GPR35Q9HC97 309 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 LOC102723971A0A1B0GUV8 181 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 HIDE1A8MVS5 230 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 B4DGG1 531 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 SLC16A7O60669 478 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 AZU1P20160 251 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 ZNF695Q8IW36 515 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 FER1L6-AS1Q8NA97 138 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 OR4P4Q8NGL7 312 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 TMEM255BQ8WV15 326 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 NICN1Q9BSH3 213 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 ODAMA1E959 279 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 FABP2P12104 132 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 CPMP14384 443 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 EPHA8P29322 1005 aaPredicted RBP10.42□□□□□ -0.74
NPHP4-202ENST00000378161 NPBWR2P48146 333 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 PCBP3P57721 371 aaKnown RBP10.42□□□□□ -0.74
NPHP4-202ENST00000378161 RUNX3Q13761 415 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 RUNX2Q13950 521 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 RAB35Q15286 201 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 NSDHLQ15738 373 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 SLC48A1Q6P1K1 146 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 ZNF788Q6ZQV5 615 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 OLIG3Q7RTU3 272 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 ADAD2Q8NCV1 583 aaKnown RBP10.42□□□□□ -0.74
NPHP4-202ENST00000378161 OR4S2Q8NH73 311 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 CCL26Q9Y258 94 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 ZNF835Q9Y2P0 537 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 EP400Q96L91 3159 aa10.41□□□□□ -0.74
NPHP4-202ENST00000378161 ADRA2CP18825 462 aa10.41□□□□□ -0.74
NPHP4-202ENST00000378161 GZMHP20718 246 aa10.41□□□□□ -0.74
NPHP4-202ENST00000378161 MAS1LP35410 378 aa10.41□□□□□ -0.74
NPHP4-202ENST00000378161 MDH2P40926 338 aaKnown RBP10.41□□□□□ -0.74
NPHP4-202ENST00000378161 FXYD4P59646 89 aa10.41□□□□□ -0.74
NPHP4-202ENST00000378161 HGFACQ04756 655 aa10.41□□□□□ -0.74
NPHP4-202ENST00000378161 ABHD17CQ6PCB6 329 aa10.41□□□□□ -0.74
NPHP4-202ENST00000378161 MMABQ96EY8 250 aaPredicted RBP10.41□□□□□ -0.74
NPHP4-202ENST00000378161 PRSS16Q9NQE7 514 aa10.41□□□□□ -0.74
NPHP4-202ENST00000378161 KLHL13Q9P2N7 655 aa10.41□□□□□ -0.74
NPHP4-202ENST00000378161 CGGBP1Q9UFW8 167 aaPredicted RBP10.41□□□□□ -0.74
NPHP4-202ENST00000378161 F5P12259 2224 aa10.41□□□□□ -0.74
NPHP4-202ENST00000378161 COL11A2P13942 1736 aaPredicted RBP10.41□□□□□ -0.74
NPHP4-202ENST00000378161 DPRXA6NFQ7 191 aa10.41□□□□□ -0.74
NPHP4-202ENST00000378161 PNMTP11086 282 aa10.41□□□□□ -0.74
NPHP4-202ENST00000378161 NPY1RP25929 384 aa10.41□□□□□ -0.74
NPHP4-202ENST00000378161 MPLP40238 635 aa10.41□□□□□ -0.74
NPHP4-202ENST00000378161 FUT5Q11128 374 aa10.41□□□□□ -0.74
NPHP4-202ENST00000378161 SHBQ15464 509 aa10.41□□□□□ -0.74
NPHP4-202ENST00000378161 Q6ZNB5 142 aa10.41□□□□□ -0.74
NPHP4-202ENST00000378161 NANOS1Q8WY41 292 aaKnown RBP10.41□□□□□ -0.74
NPHP4-202ENST00000378161 CD22P20273 847 aa10.41□□□□□ -0.74
NPHP4-202ENST00000378161 SRPXP78539 464 aa10.41□□□□□ -0.74
NPHP4-202ENST00000378161 Q56UQ5 140 aa10.41□□□□□ -0.74
NPHP4-202ENST00000378161 TMEM225Q6GV28 225 aa10.41□□□□□ -0.74
NPHP4-202ENST00000378161 SLC25A34Q6PIV7 304 aa10.41□□□□□ -0.74
NPHP4-202ENST00000378161 TMEM251Q8N6I4 163 aa10.41□□□□□ -0.74
NPHP4-202ENST00000378161 MRAP2Q96G30 205 aa10.41□□□□□ -0.74
NPHP4-202ENST00000378161 OR6C1Q96RD1 312 aa10.41□□□□□ -0.74
NPHP4-202ENST00000378161 IMMP2LQ96T52 175 aa10.41□□□□□ -0.74
NPHP4-202ENST00000378161 ANAPC13Q9BS18 74 aa10.41□□□□□ -0.74
NPHP4-202ENST00000378161 ENTPD2Q9Y5L3 495 aa10.41□□□□□ -0.74
NPHP4-202ENST00000378161 NRXN2Q9P2S2 1712 aa10.41□□□□□ -0.74
NPHP4-202ENST00000378161 SPINT1O43278 529 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 GPR75O95800 540 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 ECI1P42126 302 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 SLC18B1Q6NT16 456 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 ADAMTSL4Q6UY14 1074 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 BMPERQ8N8U9 685 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 KCNE4Q8WWG9 221 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 TMEM242Q9NWH2 141 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 ZNF816-ZNF321PA0A0X1KG74 233 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 CXorf51AA0A1B0GTR3 108 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 HSPB2A8KAH6 182 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 NKX2-1P43699 371 aaPredicted RBP10.4□□□□□ -0.74
NPHP4-202ENST00000378161 GPM6AP51674 278 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 HSPB2Q16082 182 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 C5orf24Q7Z6I8 188 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 DTWD2Q8NBA8 298 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 CTHRC1Q96CG8 243 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 KTI12Q96EK9 354 aaPredicted RBP10.4□□□□□ -0.74
NPHP4-202ENST00000378161 GPA33Q99795 319 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 GABRG3Q99928 467 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 RNF126Q9BV68 326 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 NKX2-4Q9H2Z4 354 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 PRR13Q9NZ81 148 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 NAT8BQ9UHF3 227 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms