RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 B3GALT5-AS1P59052 145 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 SELENOVP59797 346 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 RPS27AP62979 156 aaKnown RBP4.11□□□□□ -1.75
USP48-202ENST00000374730 MRPS34P82930 218 aaKnown RBP4.11□□□□□ -1.75
USP48-202ENST00000374730 FGL1Q08830 312 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 Q0VFX4 171 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 ECH1Q13011 328 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 DHRS2Q13268 280 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 ZNF345Q14585 488 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 ARL6IP1Q15041 203 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 PPA1Q15181 289 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 RAB35Q15286 201 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 CDNFQ49AH0 187 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 PHYHD1Q5SRE7 291 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 FAM27BQ5VT28 67 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 DCAF12L2Q5VW00 463 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 NSUN5P2Q63ZY6 315 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 H3F3CQ6NXT2 135 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 GLIPR1L1Q6UWM5 242 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 GSG1LQ6UXU4 331 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 TMUB2Q71RG4 321 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 CHMP1BQ7LBR1 199 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 TMED4Q7Z7H5 227 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 LYG2Q86SG7 212 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 COMMD7Q86VX2 200 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 HOGA1Q86XE5 327 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 ANGPTL5Q86XS5 388 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 C20orf196Q8IYI0 205 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 ZNF101Q8IZC7 436 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 GPR137CQ8N3F9 429 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 FAM89BQ8N5H3 189 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 ARRDC1Q8N5I2 433 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 TMEM156Q8N614 296 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 ZNF283Q8N7M2 679 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 ZIC4Q8N9L1 334 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 CHST4Q8NCG5 386 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 TMEM116Q8NCL8 245 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 STEAP2Q8NFT2 490 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 OR56B1Q8NGI3 324 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 OR6K3Q8NGY3 331 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 MITD1Q8WV92 249 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 PP6455Q8WZ26 134 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 SPTSSAQ969W0 71 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 MRGPRFQ96AM1 343 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 CMBLQ96DG6 245 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 WBP1Q96G27 269 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 FAM71F1Q96KD3 344 aaPredicted RBP4.11□□□□□ -1.75
USP48-202ENST00000374730 ZNF385AQ96PM9 386 aaKnown RBP4.11□□□□□ -1.75
USP48-202ENST00000374730 SLC6A7Q99884 636 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 CITED2Q99967 270 aaPredicted RBP4.11□□□□□ -1.75
USP48-202ENST00000374730 URM1Q9BTM9 101 aaKnown RBP4.11□□□□□ -1.75
USP48-202ENST00000374730 TM2D1Q9BX74 207 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 TMEM59Q9BXS4 323 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 SELENOIQ9C0D9 397 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 CHST5Q9GZS9 411 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 CHST6Q9GZX3 395 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 CST11Q9H112 138 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 ZNF160Q9HCG1 818 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 IFT46Q9NQC8 304 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 SLC39A1Q9NY26 324 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 ZNF319Q9P2F9 582 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 VSIG4Q9Y279 399 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 KCNK7Q9Y2U2 307 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 MRPS18CQ9Y3D5 142 aaKnown RBP4.11□□□□□ -1.75
USP48-202ENST00000374730 SESN1Q9Y6P5 492 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 SDK2Q58EX2 2172 aa4.11□□□□□ -1.75
USP48-202ENST00000374730 ZFHX4Q86UP3 3567 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 ZDBF2Q9HCK1 2354 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 LOC100509620A0A075B734 347 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 FXYD6-FXYD2A0A087WZ82 144 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 A0A0B4J2A0 478 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 A0A0D9SG52 128 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 C9orf170A2RU37 121 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 ZNF716A6NP11 495 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 M0R135 149 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 PAGE4O60829 102 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 MTRF1O75570 445 aaKnown RBP4.1□□□□□ -1.75
USP48-202ENST00000374730 OR2F2O95006 317 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 SIX6O95475 246 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 DUS4LO95620 317 aaKnown RBP4.1□□□□□ -1.75
USP48-202ENST00000374730 HLA-AP01891 365 aaKnown RBP4.1□□□□□ -1.75
USP48-202ENST00000374730 P04436 131 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 SERPINA7P05543 415 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 FCER2P06734 321 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 NMBP08949 121 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 ACAA1P09110 424 aaPredicted RBP4.1□□□□□ -1.75
USP48-202ENST00000374730 CST2P09228 141 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 MGMTP16455 207 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 GNB3P16520 340 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 CRYGSP22914 178 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 ANOS1P23352 680 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 HRH1P35367 487 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 OR3A4PP47883 348 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 TMEM50BP56557 158 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 TAS2R46P59540 309 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 UBA52P62987 128 aaKnown RBP4.1□□□□□ -1.75
USP48-202ENST00000374730 SORDQ00796 357 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 SIGLEC14Q08ET2 396 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 SCRN3Q0VDG4 424 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 PPP1R1AQ13522 171 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms