RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 LIAT1Q6ZQX7 453 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 TMEM56Q96MV1 263 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 SYT11Q9BT88 431 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 RBFOX2O43251 390 aaKnown RBP eCLIP6.3□□□□□ -1.4
CSMD2-206ENST00000373388 PRSS56P0CW18 603 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 TNFSF10P50591 281 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 C20orf27Q9GZN8 174 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 WNT11O96014 354 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 RBM11P57052 281 aaKnown RBP6.3□□□□□ -1.4
CSMD2-206ENST00000373388 FUT7Q11130 342 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 RAB32Q13637 225 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 DEGS2Q6QHC5 323 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 NR2C2APQ86WQ0 139 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 ZNF257Q9Y2Q1 563 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 HYAL3O43820 417 aaPredicted RBP6.3□□□□□ -1.4
CSMD2-206ENST00000373388 F13BP05160 661 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 SIRT6Q8N6T7 355 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 OCIAD1Q9NX40 245 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 MPDU1O75352 247 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 GCM2O75603 506 aaPredicted RBP6.3□□□□□ -1.4
CSMD2-206ENST00000373388 GHRHP01286 108 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 MRPL58Q14197 206 aaKnown RBP6.3□□□□□ -1.4
CSMD2-206ENST00000373388 SLC25A35Q3KQZ1 300 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 HIKESHIQ53FT3 197 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 PRDM13Q9H4Q3 707 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 SLC7A10Q9NS82 523 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 NTNG1Q9Y2I2 539 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 WNT6Q9Y6F9 365 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 CCDC168Q8NDH2 2452 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 IGKV6D-41A0A0C4DH26 115 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 MFAP2P55001 183 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 INHBEP58166 350 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 CMTM8Q8IZV2 173 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 UBE2ZQ9H832 354 aaPredicted RBP6.3□□□□□ -1.4
CSMD2-206ENST00000373388 CTNSO60931 367 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 NXPH3O95157 252 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 MT-CO3P00414 261 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 CD68P34810 354 aaPredicted RBP6.3□□□□□ -1.4
CSMD2-206ENST00000373388 SRSF5Q13243 272 aaKnown RBP6.3□□□□□ -1.4
CSMD2-206ENST00000373388 H1FNTQ75WM6 255 aaPredicted RBP6.3□□□□□ -1.4
CSMD2-206ENST00000373388 CPEB3Q8NE35 698 aaKnown RBP6.3□□□□□ -1.4
CSMD2-206ENST00000373388 IGSF21Q96ID5 467 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 ADAMTS5Q9UNA0 930 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 MED1Q15648 1581 aaPredicted RBP6.3□□□□□ -1.4
CSMD2-206ENST00000373388 DLEU1O43261 78 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 GAGE1Q13065 139 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 C15orf39Q6ZRI6 1047 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 C20orf196Q8IYI0 205 aa6.3□□□□□ -1.4
CSMD2-206ENST00000373388 C5P01031 1676 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 A0A1W2PRS3 328 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 COL8A1P27658 744 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 TMEM255AQ5JRV8 349 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 A0A1B0GU03 582 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 MEX3AA1L020 520 aaKnown RBP6.29□□□□□ -1.4
CSMD2-206ENST00000373388 FUT3P21217 361 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 TMEM45BQ96B21 275 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 KCNS1Q96KK3 526 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 PARLQ9H300 379 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 MAP1LC3AQ9H492 121 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 S1PR2O95136 353 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 IGF2P01344 180 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 SEMG1P04279 462 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 NHLRC1Q6VVB1 395 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 YRDCQ86U90 279 aaKnown RBP6.29□□□□□ -1.4
CSMD2-206ENST00000373388 RND1Q92730 232 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 RSPO3Q9BXY4 272 aaPredicted RBP6.29□□□□□ -1.4
CSMD2-206ENST00000373388 MAST2Q6P0Q8 1798 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 ZNF716A6NP11 495 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 TMX2-CTNND1H3BSU7 103 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 ITGB1BP1O14713 200 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 CFIP05156 583 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 ACER2Q5QJU3 275 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 BHLHA15Q7RTS1 189 aaPredicted RBP6.29□□□□□ -1.4
CSMD2-206ENST00000373388 FADS6Q8N9I5 356 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 BCL2L10Q9HD36 194 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 OTOGLQ3ZCN5 2332 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 A0A0U1RQS6 177 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 SLC25A1P53007 311 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 HHEXQ03014 270 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 FZD5Q13467 585 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 OR8B8Q15620 311 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 PLXDC1Q8IUK5 500 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 LRRC18Q8N456 261 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 LRRC29Q8WV35 223 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 PRELID3AQ96N28 172 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 MEGF9Q9H1U4 602 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 ST20Q9HBF5 79 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 ZBTB25P24278 435 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 RABAC1Q9UI14 185 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 ECM29Q5VYK3 1845 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 SONP18583 2426 aaKnown RBP6.29□□□□□ -1.4
CSMD2-206ENST00000373388 TMEM50AO95807 157 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 KLF9Q13886 244 aaPredicted RBP6.29□□□□□ -1.4
CSMD2-206ENST00000373388 PAPPA-AS1Q5QFB9 102 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 SPSB1Q96BD6 273 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 WDR83Q9BRX9 315 aaKnown RBP6.29□□□□□ -1.4
CSMD2-206ENST00000373388 KBTBD11-OT1A0A1B0GTJ5 212 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 MYADML2A6NDP7 307 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 CER1O95813 267 aa6.29□□□□□ -1.4
CSMD2-206ENST00000373388 RGS7BPQ6MZT1 257 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms