RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 C12orf4Q9NQ89 552 aa22.26■■□□□ 1.15
ATPAF1-202ENST00000371937 SLC2A8Q9NY64 477 aa22.26■■□□□ 1.15
ATPAF1-202ENST00000371937 SHISA9B4DS77 424 aa22.25■■□□□ 1.15
ATPAF1-202ENST00000371937 PEX14O75381 377 aa22.25■■□□□ 1.15
ATPAF1-202ENST00000371937 ZNF735P0CB33 412 aa22.25■■□□□ 1.15
ATPAF1-202ENST00000371937 TNFSF4P23510 183 aa22.25■■□□□ 1.15
ATPAF1-202ENST00000371937 ZNF146Q15072 292 aa22.25■■□□□ 1.15
ATPAF1-202ENST00000371937 CARTPTQ16568 116 aa22.25■■□□□ 1.15
ATPAF1-202ENST00000371937 MEGF10Q96KG7 1140 aa22.25■■□□□ 1.15
ATPAF1-202ENST00000371937 SLC6A7Q99884 636 aa22.25■■□□□ 1.15
ATPAF1-202ENST00000371937 SLC25A21Q9BQT8 299 aaPredicted RBP22.25■■□□□ 1.15
ATPAF1-202ENST00000371937 HDHD3Q9BSH5 251 aaPredicted RBP22.25■■□□□ 1.15
ATPAF1-202ENST00000371937 C1orf123Q9NWV4 160 aa22.25■■□□□ 1.15
ATPAF1-202ENST00000371937 hCG_1807616A0A1W2PRN6 198 aa22.24■■□□□ 1.15
ATPAF1-202ENST00000371937 DEGS1O15121 323 aa22.24■■□□□ 1.15
ATPAF1-202ENST00000371937 MICBQ29980 383 aa22.24■■□□□ 1.15
ATPAF1-202ENST00000371937 VAX1Q5SQQ9 334 aa22.24■■□□□ 1.15
ATPAF1-202ENST00000371937 IDO2Q6ZQW0 420 aa22.24■■□□□ 1.15
ATPAF1-202ENST00000371937 OR5H2Q8NGV7 314 aa22.24■■□□□ 1.15
ATPAF1-202ENST00000371937 ALG5Q9Y673 324 aa22.24■■□□□ 1.15
ATPAF1-202ENST00000371937 PMP2P02689 132 aa22.24■■□□□ 1.15
ATPAF1-202ENST00000371937 FCGR3AP08637 254 aa22.24■■□□□ 1.15
ATPAF1-202ENST00000371937 OR3A3P47888 321 aa22.24■■□□□ 1.15
ATPAF1-202ENST00000371937 RBM39Q14498 530 aaKnown RBP22.24■■□□□ 1.15
ATPAF1-202ENST00000371937 DMRTC2Q8IXT2 367 aaPredicted RBP22.24■■□□□ 1.15
ATPAF1-202ENST00000371937 DIRC2Q96SL1 478 aa22.24■■□□□ 1.15
ATPAF1-202ENST00000371937 NEURL2Q9BR09 285 aa22.24■■□□□ 1.15
ATPAF1-202ENST00000371937 FN3KRPQ9HA64 309 aa22.24■■□□□ 1.15
ATPAF1-202ENST00000371937 IL19Q9UHD0 177 aa22.24■■□□□ 1.15
ATPAF1-202ENST00000371937 GLS2Q9UI32 602 aa22.24■■□□□ 1.15
ATPAF1-202ENST00000371937 ADGRG4Q8IZF6 3080 aa22.24■■□□□ 1.15
ATPAF1-202ENST00000371937 SH2D1BO14796 132 aa22.23■■□□□ 1.15
ATPAF1-202ENST00000371937 CLDN14O95500 239 aa22.23■■□□□ 1.15
ATPAF1-202ENST00000371937 CSN2P05814 226 aa22.23■■□□□ 1.15
ATPAF1-202ENST00000371937 ZNF44P15621 663 aa22.23■■□□□ 1.15
ATPAF1-202ENST00000371937 SERPINF1P36955 418 aa22.23■■□□□ 1.15
ATPAF1-202ENST00000371937 CFHR2P36980 270 aa22.23■■□□□ 1.15
ATPAF1-202ENST00000371937 CHRFAM7AQ494W8 412 aa22.23■■□□□ 1.15
ATPAF1-202ENST00000371937 ARRDC1Q8N5I2 433 aa22.23■■□□□ 1.15
ATPAF1-202ENST00000371937 SUMF2Q8NBJ7 301 aa22.23■■□□□ 1.15
ATPAF1-202ENST00000371937 OR5AP2Q8NGF4 316 aa22.23■■□□□ 1.15
ATPAF1-202ENST00000371937 OR10Z1Q8NGY1 313 aa22.23■■□□□ 1.15
ATPAF1-202ENST00000371937 ARPC1BO15143 372 aaKnown RBP22.22■■□□□ 1.15
ATPAF1-202ENST00000371937 GLRA1P23415 457 aa22.22■■□□□ 1.15
ATPAF1-202ENST00000371937 GATA4P43694 442 aa22.22■■□□□ 1.15
ATPAF1-202ENST00000371937 GMFBP60983 142 aa22.22■■□□□ 1.15
ATPAF1-202ENST00000371937 SCGB2B2Q4G0G5 96 aa22.22■■□□□ 1.15
ATPAF1-202ENST00000371937 Q6P435 159 aa22.22■■□□□ 1.15
ATPAF1-202ENST00000371937 NEK7Q8TDX7 302 aa22.22■■□□□ 1.15
ATPAF1-202ENST00000371937 DYRK2Q92630 601 aa22.22■■□□□ 1.15
ATPAF1-202ENST00000371937 RASL12Q9NYN1 266 aa22.22■■□□□ 1.15
ATPAF1-202ENST00000371937 FLVCR2Q9UPI3 526 aa22.22■■□□□ 1.15
ATPAF1-202ENST00000371937 RNF115Q9Y4L5 304 aa22.22■■□□□ 1.15
ATPAF1-202ENST00000371937 HIVEP3Q5T1R4 2406 aa22.22■■□□□ 1.15
ATPAF1-202ENST00000371937 PRAF2O60831 178 aa22.22■■□□□ 1.15
ATPAF1-202ENST00000371937 ZG16O60844 167 aa22.22■■□□□ 1.15
ATPAF1-202ENST00000371937 IGHV1-46P01743 117 aa22.22■■□□□ 1.15
ATPAF1-202ENST00000371937 TNFAIP6P98066 277 aaPredicted RBP22.22■■□□□ 1.15
ATPAF1-202ENST00000371937 MAFIPQ8WZ33 124 aa22.22■■□□□ 1.15
ATPAF1-202ENST00000371937 DPCDQ9BVM2 203 aaPredicted RBP22.22■■□□□ 1.15
ATPAF1-202ENST00000371937 RIMS4Q9H426 269 aaPredicted RBP22.22■■□□□ 1.15
ATPAF1-202ENST00000371937 TRAV24A0A0B4J272 114 aa22.21■■□□□ 1.15
ATPAF1-202ENST00000371937 HS3ST1O14792 307 aa22.21■■□□□ 1.15
ATPAF1-202ENST00000371937 SMIM21Q3B7S5 101 aa22.21■■□□□ 1.15
ATPAF1-202ENST00000371937 ACP7Q6ZNF0 438 aa22.21■■□□□ 1.15
ATPAF1-202ENST00000371937 LRRC29Q8WV35 223 aa22.21■■□□□ 1.15
ATPAF1-202ENST00000371937 ITLN1Q8WWA0 313 aa22.21■■□□□ 1.15
ATPAF1-202ENST00000371937 ITLN2Q8WWU7 325 aaPredicted RBP22.21■■□□□ 1.15
ATPAF1-202ENST00000371937 ANXA10Q9UJ72 324 aa22.21■■□□□ 1.15
ATPAF1-202ENST00000371937 ANKHD1Q8IWZ3 2542 aaKnown RBP22.21■■□□□ 1.15
ATPAF1-202ENST00000371937 C7orf66A4D0T2 115 aa22.2■■□□□ 1.14
ATPAF1-202ENST00000371937 E7EQL1 145 aa22.2■■□□□ 1.14
ATPAF1-202ENST00000371937 ADH4P08319 380 aa22.2■■□□□ 1.14
ATPAF1-202ENST00000371937 MECP2P51608 486 aaKnown RBP22.2■■□□□ 1.14
ATPAF1-202ENST00000371937 TMEM17Q86X19 198 aa22.2■■□□□ 1.14
ATPAF1-202ENST00000371937 CHMP1AQ9HD42 196 aaPredicted RBP22.2■■□□□ 1.14
ATPAF1-202ENST00000371937 RELNP78509 3460 aa22.2■■□□□ 1.14
ATPAF1-202ENST00000371937 C3orf80F5H4A9 247 aa22.2■■□□□ 1.14
ATPAF1-202ENST00000371937 OR2H2O95918 312 aa22.2■■□□□ 1.14
ATPAF1-202ENST00000371937 TRAPPC2P0DI81 140 aa22.2■■□□□ 1.14
ATPAF1-202ENST00000371937 TRAPPC2BP0DI82 140 aa22.2■■□□□ 1.14
ATPAF1-202ENST00000371937 APOBEC3AP31941 199 aaPredicted RBP22.2■■□□□ 1.14
ATPAF1-202ENST00000371937 ARPC4P59998 168 aa22.2■■□□□ 1.14
ATPAF1-202ENST00000371937 ZNF554Q86TJ5 538 aa22.2■■□□□ 1.14
ATPAF1-202ENST00000371937 GIMAP1Q8WWP7 306 aa22.2■■□□□ 1.14
ATPAF1-202ENST00000371937 RDH5Q92781 318 aa22.2■■□□□ 1.14
ATPAF1-202ENST00000371937 ERGIC1Q969X5 290 aa22.2■■□□□ 1.14
ATPAF1-202ENST00000371937 WDR13Q9H1Z4 485 aa22.2■■□□□ 1.14
ATPAF1-202ENST00000371937 ZNF286AQ9HBT8 521 aa22.2■■□□□ 1.14
ATPAF1-202ENST00000371937 A0A0A6YYJ9 748 aa22.19■■□□□ 1.14
ATPAF1-202ENST00000371937 FAM221AA4D161 298 aa22.19■■□□□ 1.14
ATPAF1-202ENST00000371937 HMX3A6NHT5 357 aa22.19■■□□□ 1.14
ATPAF1-202ENST00000371937 PYCARD-AS1I3L0S3 204 aa22.19■■□□□ 1.14
ATPAF1-202ENST00000371937 M0R233 179 aa22.19■■□□□ 1.14
ATPAF1-202ENST00000371937 HSPB6O14558 160 aa22.19■■□□□ 1.14
ATPAF1-202ENST00000371937 WNT9BO14905 357 aa22.19■■□□□ 1.14
ATPAF1-202ENST00000371937 KNG1P01042 644 aa22.19■■□□□ 1.14
ATPAF1-202ENST00000371937 TSPAN5P62079 268 aa22.19■■□□□ 1.14
ATPAF1-202ENST00000371937 SRSF7Q16629 238 aaKnown RBP eCLIP22.19■■□□□ 1.14
ATPAF1-202ENST00000371937 AKAP14Q86UN6 197 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms