RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 TMEM252Q8N6L7 170 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 SLC37A2Q8TED4 501 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 YPEL2Q96QA6 119 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 RNF115Q9Y4L5 304 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 MED12Q93074 2177 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 SERPINE3A8MV23 424 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 STMND1H3BQB6 276 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 ADH1BP00325 375 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 FOXL2P58012 376 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 PAX5Q02548 391 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 FBXW12Q6X9E4 464 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 C16orf47Q6ZP98 133 aaPredicted RBP10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 C20orf196Q8IYI0 205 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 SUMF1Q8NBK3 374 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 OR5C1Q8NGR4 320 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 DIRC2Q96SL1 478 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 UBE2ZQ9H832 354 aaPredicted RBP10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 LYRM2Q9NU23 88 aaPredicted RBP10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 ST8SIA3O43173 380 aa10.1□□□□□ -0.79
SMARCA1-201ENST00000371121 TMEM225BP0DP42 221 aa10.1□□□□□ -0.79
SMARCA1-201ENST00000371121 ZNF20P17024 532 aa10.1□□□□□ -0.79
SMARCA1-201ENST00000371121 CTHP32929 405 aa10.1□□□□□ -0.79
SMARCA1-201ENST00000371121 SLC6A8P48029 635 aa10.1□□□□□ -0.79
SMARCA1-201ENST00000371121 TMEM123Q8N131 208 aa10.1□□□□□ -0.79
SMARCA1-201ENST00000371121 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.1□□□□□ -0.79
SMARCA1-201ENST00000371121 ZNF665Q9H7R5 613 aa10.1□□□□□ -0.79
SMARCA1-201ENST00000371121 SLC7A11Q9UPY5 501 aa10.1□□□□□ -0.79
SMARCA1-201ENST00000371121 IGKV3D-11A0A0A0MRZ8 115 aa10.1□□□□□ -0.79
SMARCA1-201ENST00000371121 ZNF878C9JN71 531 aa10.1□□□□□ -0.79
SMARCA1-201ENST00000371121 CST7O76096 145 aa10.1□□□□□ -0.79
SMARCA1-201ENST00000371121 IFNA21P01568 189 aa10.1□□□□□ -0.79
SMARCA1-201ENST00000371121 FGF5P12034 268 aa10.1□□□□□ -0.79
SMARCA1-201ENST00000371121 DUSP1P28562 367 aa10.1□□□□□ -0.79
SMARCA1-201ENST00000371121 TANGO2Q6ICL3 276 aa10.1□□□□□ -0.79
SMARCA1-201ENST00000371121 ZNF774Q6NX45 483 aa10.1□□□□□ -0.79
SMARCA1-201ENST00000371121 THNSL2Q86YJ6 484 aa10.1□□□□□ -0.79
SMARCA1-201ENST00000371121 MAGT1Q9H0U3 335 aa10.1□□□□□ -0.79
SMARCA1-201ENST00000371121 A0A1W2PQD3 144 aa10.1□□□□□ -0.79
SMARCA1-201ENST00000371121 A0A1W2PQF6 199 aa10.1□□□□□ -0.79
SMARCA1-201ENST00000371121 ZNF705GA8MUZ8 300 aaPredicted RBP10.1□□□□□ -0.79
SMARCA1-201ENST00000371121 H3BMH7 237 aa10.1□□□□□ -0.79
SMARCA1-201ENST00000371121 CLDN34H7C241 214 aa10.1□□□□□ -0.79
SMARCA1-201ENST00000371121 LRP11Q86VZ4 500 aa10.1□□□□□ -0.79
SMARCA1-201ENST00000371121 OR51G1Q8NGK1 321 aa10.1□□□□□ -0.79
SMARCA1-201ENST00000371121 SRD5A3Q9H8P0 318 aa10.1□□□□□ -0.79
SMARCA1-201ENST00000371121 B3GALT1Q9Y5Z6 326 aa10.1□□□□□ -0.79
SMARCA1-201ENST00000371121 B4DEV8 164 aa10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 B4E171 279 aa10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 GABRR1P24046 479 aa10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 WNT5AP41221 380 aa10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 TSPAN7P41732 249 aa10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 RPL23AP62750 156 aaKnown RBP10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 ZNF154Q13106 437 aa10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 CLN3Q13286 438 aa10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 OR10A7Q8NGE5 316 aa10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 OIT3Q8WWZ8 545 aa10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 XKRY2A2RUG3 117 aa10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 KIAA1324LA8MWY0 1029 aaPredicted RBP10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 CA11O75493 328 aa10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 NUDT14O95848 222 aa10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 GCGP01275 180 aa10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 PCP4P48539 62 aa10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 BIDP55957 195 aa10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 HSD17B7P56937 341 aa10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 RTP5Q14D33 572 aa10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 ZNF441Q8N8Z8 693 aa10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 CCDC3Q9BQI4 270 aa10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 EML6Q6ZMW3 1958 aa10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 TRAV1-1A0A0B4J248 108 aa10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 FOSL2P15408 326 aa10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 CD33P20138 364 aa10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 LINC00310P59036 64 aa10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 FXYD4P59646 89 aa10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 ERVFC1-1P60608 527 aa10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 RAB11AP62491 216 aa10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 ZNF542PQ5EBM4 170 aa10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 OR14L1PQ8NHC6 308 aa10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 CYP8B1Q9UNU6 501 aa10.09□□□□□ -0.79
SMARCA1-201ENST00000371121 SLC33A1O00400 549 aaPredicted RBP10.08□□□□□ -0.8
SMARCA1-201ENST00000371121 SSSCA1O60232 199 aa10.08□□□□□ -0.8
SMARCA1-201ENST00000371121 NXPH3O95157 252 aa10.08□□□□□ -0.8
SMARCA1-201ENST00000371121 SELEP16581 610 aa10.08□□□□□ -0.8
SMARCA1-201ENST00000371121 FAHP16930 419 aa10.08□□□□□ -0.8
SMARCA1-201ENST00000371121 SFTPDP35247 375 aa10.08□□□□□ -0.8
SMARCA1-201ENST00000371121 TRA2AQ13595 282 aaKnown RBP eCLIP10.08□□□□□ -0.84e-6■■■□□ 15.9
SMARCA1-201ENST00000371121 HERPUD1Q15011 391 aa10.08□□□□□ -0.8
SMARCA1-201ENST00000371121 TMEM196Q5HYL7 178 aa10.08□□□□□ -0.8
SMARCA1-201ENST00000371121 C1orf194Q5T5A4 169 aa10.08□□□□□ -0.8
SMARCA1-201ENST00000371121 FAM57BQ71RH2 274 aa10.08□□□□□ -0.8
SMARCA1-201ENST00000371121 GRINAQ7Z429 371 aa10.08□□□□□ -0.8
SMARCA1-201ENST00000371121 MMABQ96EY8 250 aaPredicted RBP10.08□□□□□ -0.8
SMARCA1-201ENST00000371121 RASL10BQ96S79 203 aa10.08□□□□□ -0.8
SMARCA1-201ENST00000371121 PNO1Q9NRX1 252 aaKnown RBP10.08□□□□□ -0.8
SMARCA1-201ENST00000371121 PLA2G3Q9NZ20 509 aa10.08□□□□□ -0.8
SMARCA1-201ENST00000371121 ASPMQ8IZT6 3477 aa10.08□□□□□ -0.8
SMARCA1-201ENST00000371121 YLPM1P49750 1951 aaKnown RBP10.08□□□□□ -0.8
SMARCA1-201ENST00000371121 CCDC163A0A0D9SF12 145 aa10.08□□□□□ -0.8
SMARCA1-201ENST00000371121 FGF8P55075 233 aaPredicted RBP10.08□□□□□ -0.8
SMARCA1-201ENST00000371121 ACTL10Q5JWF8 245 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms