RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 SSBP1Q04837 148 aaKnown RBP7.45□□□□□ -1.22
TPM3-213ENST00000368545 PLA2G7Q13093 441 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 TIMM23BQ5SRD1 257 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 TMEM211Q6ICI0 200 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 ZGRF1Q86YA3 2104 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 C1orf174Q8IYL3 243 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 RPRMLQ8N4K4 120 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 FAM46BQ96A09 425 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 BORCS8Q96FH0 119 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 ZC3HAV1LQ96H79 300 aaKnown RBP7.45□□□□□ -1.22
TPM3-213ENST00000368545 SPACA5Q96QH8 159 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 NKX3-1Q99801 234 aaPredicted RBP7.45□□□□□ -1.22
TPM3-213ENST00000368545 MEGF9Q9H1U4 602 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 KCNK15Q9H427 330 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 TUBG2Q9NRH3 451 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 GPR173Q9NS66 373 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 RBFOX1Q9NWB1 397 aaKnown RBP7.45□□□□□ -1.22
TPM3-213ENST00000368545 PTTG3PQ9NZH4 202 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 ZNF629Q9UEG4 869 aaPredicted RBP7.45□□□□□ -1.22
TPM3-213ENST00000368545 SETD2Q9BYW2 2564 aaPredicted RBP7.45□□□□□ -1.22
TPM3-213ENST00000368545 SULT1C2O00338 296 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 PLA2G10O15496 165 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 CST4P01036 141 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 GSTT2BP0CG30 244 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 EDN2P20800 178 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 FUT6P51993 359 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 MTCP1P56278 107 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 SUMO2P61956 95 aaKnown RBP7.45□□□□□ -1.22
TPM3-213ENST00000368545 UNC119Q13432 240 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 SNTB1Q13884 538 aaKnown RBP7.45□□□□□ -1.22
TPM3-213ENST00000368545 PLCXD3Q63HM9 321 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 C3P1Q6ZMU1 363 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 DNM1P46Q6ZS02 220 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 GDPD3Q7L5L3 318 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 TMEM200AQ86VY9 491 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 WDR31Q8NA23 367 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 OR56B2PQ8NGI1 322 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 ENKURQ8TC29 256 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 NPRL2Q8WTW4 380 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 ELMOD3Q96FG2 381 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 URM1Q9BTM9 101 aaKnown RBP7.45□□□□□ -1.22
TPM3-213ENST00000368545 TMEM59Q9BXS4 323 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 TAS2R8Q9NYW2 309 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 KIAA1456Q9P272 454 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 STARD10Q9Y365 291 aa7.45□□□□□ -1.22
TPM3-213ENST00000368545 A0A1W2PR80 420 aa7.44□□□□□ -1.22
TPM3-213ENST00000368545 SMPD2O60906 423 aa7.44□□□□□ -1.22
TPM3-213ENST00000368545 ZNF780AO75290 641 aaPredicted RBP7.44□□□□□ -1.22
TPM3-213ENST00000368545 KDM4BO94953 1096 aa7.44□□□□□ -1.22
TPM3-213ENST00000368545 NGFP01138 241 aa7.44□□□□□ -1.22
TPM3-213ENST00000368545 IGLV1-44P01699 117 aa7.44□□□□□ -1.22
TPM3-213ENST00000368545 CHRM2P08172 466 aa7.44□□□□□ -1.22
TPM3-213ENST00000368545 RFX2P48378 723 aa7.44□□□□□ -1.22
TPM3-213ENST00000368545 ATP1B3P54709 279 aa7.44□□□□□ -1.22
TPM3-213ENST00000368545 F2RL1P55085 397 aa7.44□□□□□ -1.22
TPM3-213ENST00000368545 GPR176Q14439 515 aa7.44□□□□□ -1.22
TPM3-213ENST00000368545 TSC22D1Q15714 1073 aa7.44□□□□□ -1.22
TPM3-213ENST00000368545 ZNF474Q6S9Z5 364 aaPredicted RBP7.44□□□□□ -1.22
TPM3-213ENST00000368545 CCBE1Q6UXH8 406 aaPredicted RBP7.44□□□□□ -1.22
TPM3-213ENST00000368545 FBXW12Q6X9E4 464 aa7.44□□□□□ -1.22
TPM3-213ENST00000368545 RFPL4BQ6ZWI9 263 aa7.44□□□□□ -1.22
TPM3-213ENST00000368545 NRARPQ7Z6K4 114 aa7.44□□□□□ -1.22
TPM3-213ENST00000368545 PAQR4Q8N4S7 273 aaPredicted RBP7.44□□□□□ -1.22
TPM3-213ENST00000368545 TNFAIP8L1Q8WVP5 186 aa7.44□□□□□ -1.22
TPM3-213ENST00000368545 PIGCQ92535 297 aa7.44□□□□□ -1.22
TPM3-213ENST00000368545 C1orf147Q96MC9 270 aaPredicted RBP7.44□□□□□ -1.22
TPM3-213ENST00000368545 PAPOLGQ9BWT3 736 aaKnown RBP7.44□□□□□ -1.22
TPM3-213ENST00000368545 AUNIPQ9H7T9 357 aa7.44□□□□□ -1.22
TPM3-213ENST00000368545 TINAGQ9UJW2 476 aa7.44□□□□□ -1.22
TPM3-213ENST00000368545 RBMX2Q9Y388 322 aaKnown RBP7.44□□□□□ -1.22
TPM3-213ENST00000368545 TRGV11A0A075B6L2 103 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 TRAV18A0A075B6X5 111 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 LINC00854A0A1B0GVQ3 168 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 ANKRD30BLA7E2S9 258 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 LANCL1O43813 399 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 CD3GP09693 182 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 SELEP16581 610 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 DUSP1P28562 367 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 PRSS3P35030 304 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 ACTBP60709 375 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 ZP1P60852 638 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 ACTG1P63261 375 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 CRIP3Q6Q6R5 217 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 GLDNQ6ZMI3 551 aaPredicted RBP7.43□□□□□ -1.22
TPM3-213ENST00000368545 SSX8Q7RTT4 187 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 MYPOPQ86VE0 399 aaPredicted RBP7.43□□□□□ -1.22
TPM3-213ENST00000368545 ZDHHC23Q8IYP9 409 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 LRRC75A-AS1Q8N1F1 130 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 STEAP2Q8NFT2 490 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 ELOVL5Q9NYP7 299 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 MPC1Q9Y5U8 109 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 SLC25A15Q9Y619 301 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 CACNG2Q9Y698 323 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 FAM240BA0A1B0GVZ2 78 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 FAM230AA0A1W2PPH8 454 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 NAP1L6A6NFF2 107 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 CD300LBA8K4G0 201 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 ZNF850A8MQ14 1090 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 EEF1E1-BLOC1S5C9J1V9 151 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 H7C417 338 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms