RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 DRAXINQ8NBI3 349 aaPredicted RBP1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 LRRC20Q8TCA0 184 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 DOK4Q8TEW6 326 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 OR5P2Q8WZ92 322 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 CIDECQ96AQ7 238 aaPredicted RBP1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 OTUB2Q96DC9 234 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 GLT1D1Q96MS3 346 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 CIB1Q99828 191 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 TM2D3Q9BRN9 247 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 NXF2Q9GZY0 626 aaKnown RBP1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 SDHAF3Q9NRP4 125 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 INIPQ9NRY2 104 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 AGPAT3Q9NRZ7 376 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 NLE1Q9NVX2 485 aaPredicted RBP1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 POFUT2Q9Y2G5 429 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 ICOSQ9Y6W8 199 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 YLPM1P49750 1951 aaKnown RBP1.59□□□□□ -2.16
ECHDC1-201ENST00000368287 RAB19A4D1S5 217 aa1.58□□□□□ -2.16
ECHDC1-201ENST00000368287 GOLGA6L4A6NEF3 574 aa1.58□□□□□ -2.16
ECHDC1-201ENST00000368287 ZNF729A6NN14 1252 aaPredicted RBP1.58□□□□□ -2.16
ECHDC1-201ENST00000368287 PSMD11O00231 422 aa1.58□□□□□ -2.16
ECHDC1-201ENST00000368287 TCAPO15273 167 aa1.58□□□□□ -2.16
ECHDC1-201ENST00000368287 IGHMP01871 453 aa1.58□□□□□ -2.16
ECHDC1-201ENST00000368287 CCDC172P0C7W6 258 aa1.58□□□□□ -2.16
ECHDC1-201ENST00000368287 LGALS7P47929 136 aa1.58□□□□□ -2.16
ECHDC1-201ENST00000368287 ENDOGQ14249 297 aaKnown RBP1.58□□□□□ -2.16
ECHDC1-201ENST00000368287 IHHQ14623 411 aa1.58□□□□□ -2.16
ECHDC1-201ENST00000368287 VAMP3Q15836 100 aa1.58□□□□□ -2.16
ECHDC1-201ENST00000368287 CLEC12AQ5QGZ9 265 aa1.58□□□□□ -2.16
ECHDC1-201ENST00000368287 MRPL2Q5T653 305 aaKnown RBP1.58□□□□□ -2.16
ECHDC1-201ENST00000368287 AADACL4Q5VUY2 407 aa1.58□□□□□ -2.16
ECHDC1-201ENST00000368287 ERICH5Q6P6B1 374 aa1.58□□□□□ -2.16
ECHDC1-201ENST00000368287 UGT2A3Q6UWM9 527 aa1.58□□□□□ -2.16
ECHDC1-201ENST00000368287 AMN1Q8IY45 258 aa1.58□□□□□ -2.16
ECHDC1-201ENST00000368287 OR2M3Q8NG83 312 aa1.58□□□□□ -2.16
ECHDC1-201ENST00000368287 OR6K3Q8NGY3 331 aa1.58□□□□□ -2.16
ECHDC1-201ENST00000368287 OR51Q1Q8NH59 317 aa1.58□□□□□ -2.16
ECHDC1-201ENST00000368287 C2orf15Q8WU43 125 aaKnown RBP1.58□□□□□ -2.16
ECHDC1-201ENST00000368287 MAL2Q969L2 176 aa1.58□□□□□ -2.16
ECHDC1-201ENST00000368287 TSSK6Q9BXA6 273 aa1.58□□□□□ -2.16
ECHDC1-201ENST00000368287 HAUS4Q9H6D7 363 aa1.58□□□□□ -2.16
ECHDC1-201ENST00000368287 IFT46Q9NQC8 304 aa1.58□□□□□ -2.16
ECHDC1-201ENST00000368287 TAS2R1Q9NYW7 299 aa1.58□□□□□ -2.16
ECHDC1-201ENST00000368287 ZNF780BQ9Y6R6 833 aa1.58□□□□□ -2.16
ECHDC1-201ENST00000368287 PLXNB1O43157 2135 aa1.58□□□□□ -2.16
ECHDC1-201ENST00000368287 IGHV3-43A0A0B4J1X8 118 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 E7EWF7 191 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 C15orf65H3BRN8 121 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 MYO1DO94832 1006 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 S100A9P06702 114 aaKnown RBP1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 IVLP07476 585 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 LGALS3P17931 250 aaKnown RBP1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 PRPS1L1P21108 318 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 GCLMP48507 274 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 ETV1P50549 477 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 FOXA1P55317 472 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 CCL23P55773 120 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 RAB38P57729 211 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 KRTAP6-3Q3LI67 103 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 UBE2NLQ5JXB2 153 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 AMMECR1LQ6DCA0 310 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 ZNF470Q6ECI4 717 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 GLYATQ6IB77 296 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 DPPA2Q7Z7J5 298 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 CYP4Z1Q86W10 505 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 SPICQ8N5J4 248 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 OR8G5Q8NG78 346 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 MUC7Q8TAX7 377 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 ACTL9Q8TC94 416 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 YIPF5Q969M3 257 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 ZMYND19Q96E35 227 aaPredicted RBP1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 IGF2BP2-AS1Q96M15 143 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 BIRC8Q96P09 236 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 ULBP1Q9BZM6 244 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 TXNIPQ9H3M7 391 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 XKR8Q9H6D3 395 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 TMBIM4Q9HC24 238 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 ASF1BQ9NVP2 202 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 DNAJC27Q9NZQ0 273 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 MRM2Q9UI43 246 aaKnown RBP1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 SLC22A14Q9Y267 594 aa1.57□□□□□ -2.16
ECHDC1-201ENST00000368287 NLRC5Q86WI3 1866 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 A0A0B4J2C4 111 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 MYBPHLA2RUH7 354 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 M0QXV9 152 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 CDIPTO14735 213 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 RGS5O15539 181 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 SLC37A4O43826 429 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 CPSF4O95639 269 aaKnown RBP1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 SOD3P08294 240 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 CECR9P0C854 216 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 GIMD1P0DJR0 217 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 S100A2P29034 98 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 HTR2BP41595 481 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 MAGEA3P43357 314 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 DNASE1L1P49184 302 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 PLTPP55058 493 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 AQP5P55064 265 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 BNIP2Q12982 314 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 ZNF141Q15928 474 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms