RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 ST8SIA3O43173 380 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 CHRNA7P36544 502 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 EMX1Q04741 257 aaPredicted RBP6.31□□□□□ -1.4
SPTA1-201ENST00000368147 ECSCRQ19T08 205 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 ZNF528Q3MIS6 628 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 TMEM215Q68D42 235 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 ZNF787Q6DD87 383 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 FAAP20Q6NZ36 180 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 CCDC190Q86UF4 302 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 MRGPRX4Q96LA9 322 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 TIMP4Q99727 224 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 FAM53CQ9NYF3 392 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 CYB5R1Q9UHQ9 305 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 TCFL5Q9UL49 500 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 KIR2DS1A0A191URI9 304 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 PRSS37A4D1T9 235 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 KIR2DS4P43632 304 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 GNG4P50150 75 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 TCL1AP56279 114 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 KIR2DS1Q14954 304 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 SFXN4Q6P4A7 337 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 FAM24BQ8N5W8 94 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 TMEM171Q8WVE6 324 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 SLC7A6Q92536 515 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 RASL11BQ9BPW5 248 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 PIMREGQ9BSJ6 248 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 MAGT1Q9H0U3 335 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 TMEM30AQ9NV96 361 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 KCNMB2Q9Y691 235 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 COX11Q9Y6N1 276 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 IGHV1OR21-1A0A087WYE8 117 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 ISLRO14498 428 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 MELTFP08582 738 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 NKX2-1P43699 371 aaPredicted RBP6.31□□□□□ -1.4
SPTA1-201ENST00000368147 CACNG7P62955 275 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 RNPS1Q15287 305 aaKnown RBP6.31□□□□□ -1.4
SPTA1-201ENST00000368147 IGSF11Q5DX21 431 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 ATP1A1-AS1Q5TC04 95 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 ZNF774Q6NX45 483 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 CLEC2AQ6UVW9 174 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 ARHGEF39Q8N4T4 335 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 PHYHIPQ92561 330 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 SEH1LQ96EE3 360 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 AQP10Q96PS8 301 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 S1PR5Q9H228 398 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 CNOT2Q9NZN8 540 aaKnown RBP6.31□□□□□ -1.4
SPTA1-201ENST00000368147 FREM3P0C091 2139 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 PPICP45877 212 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 Q499Y3 187 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 C19orf54Q5BKX5 351 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 CMPK2Q5EBM0 449 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 DRAM2Q6UX65 266 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 RBPMS2Q6ZRY4 209 aaKnown RBP6.31□□□□□ -1.4
SPTA1-201ENST00000368147 PLPP6Q8IY26 295 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 FOXB1Q99853 325 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 B3GALT5Q9Y2C3 310 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 TGIF2-C20orf24A0A0A6YYL0 155 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 UBE2L6O14933 153 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 ETHE1O95571 254 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 POLR2IP36954 125 aaKnown RBP6.31□□□□□ -1.4
SPTA1-201ENST00000368147 ACAA2P42765 397 aaKnown RBP6.31□□□□□ -1.4
SPTA1-201ENST00000368147 PCP4P48539 62 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 EIF3IQ13347 325 aaKnown RBP6.31□□□□□ -1.4
SPTA1-201ENST00000368147 GUCA2BQ16661 112 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 OR2L13Q8N349 312 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 OR8G5Q8NG78 346 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 LRRC29Q8WV35 223 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 ANKRD60Q9BZ19 345 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 RBFOX1Q9NWB1 397 aaKnown RBP6.31□□□□□ -1.4
SPTA1-201ENST00000368147 SLCO1C1Q9NYB5 712 aa6.31□□□□□ -1.4
SPTA1-201ENST00000368147 NKX2-8O15522 239 aa6.3□□□□□ -1.4
SPTA1-201ENST00000368147 NME2P1O60361 137 aa6.3□□□□□ -1.4
SPTA1-201ENST00000368147 FCMRO60667 390 aa6.3□□□□□ -1.4
SPTA1-201ENST00000368147 CA2P00918 260 aa6.3□□□□□ -1.4
SPTA1-201ENST00000368147 IL4P05112 153 aa6.3□□□□□ -1.4
SPTA1-201ENST00000368147 ADRA2AP08913 450 aa6.3□□□□□ -1.4
SPTA1-201ENST00000368147 PTHLHP12272 177 aa6.3□□□□□ -1.4
SPTA1-201ENST00000368147 GDNFP39905 211 aa6.3□□□□□ -1.4
SPTA1-201ENST00000368147 DLK1P80370 383 aa6.3□□□□□ -1.4
SPTA1-201ENST00000368147 LY6EQ16553 131 aa6.3□□□□□ -1.4
SPTA1-201ENST00000368147 OR5AP2Q8NGF4 316 aa6.3□□□□□ -1.4
SPTA1-201ENST00000368147 OR10D4PQ8NGN7 298 aa6.3□□□□□ -1.4
SPTA1-201ENST00000368147 VN1R17PQ8TDU5 208 aa6.3□□□□□ -1.4
SPTA1-201ENST00000368147 FKBP11Q9NYL4 201 aa6.3□□□□□ -1.4
SPTA1-201ENST00000368147 PPP1CCP36873 323 aaKnown RBP6.3□□□□□ -1.4
SPTA1-201ENST00000368147 PRRX1P54821 245 aa6.3□□□□□ -1.4
SPTA1-201ENST00000368147 AESQ08117 197 aa6.3□□□□□ -1.4
SPTA1-201ENST00000368147 SHBQ15464 509 aa6.3□□□□□ -1.4
SPTA1-201ENST00000368147 FGF11Q92914 225 aa6.3□□□□□ -1.4
SPTA1-201ENST00000368147 LHX4Q969G2 390 aa6.3□□□□□ -1.4
SPTA1-201ENST00000368147 GRAMD2BQ96HH9 432 aa6.3□□□□□ -1.4
SPTA1-201ENST00000368147 ELOVL1Q9BW60 279 aa6.3□□□□□ -1.4
SPTA1-201ENST00000368147 TXNIPQ9H3M7 391 aa6.3□□□□□ -1.4
SPTA1-201ENST00000368147 ISG20L2Q9H9L3 353 aaKnown RBP6.3□□□□□ -1.4
SPTA1-201ENST00000368147 PIPOXQ9P0Z9 390 aa6.3□□□□□ -1.4
SPTA1-201ENST00000368147 QSER1Q2KHR3 1735 aa6.3□□□□□ -1.4
SPTA1-201ENST00000368147 UBE2L5PA0A1B0GUS4 154 aa6.3□□□□□ -1.4
SPTA1-201ENST00000368147 UPK1AO00322 258 aa6.3□□□□□ -1.4
SPTA1-201ENST00000368147 TCF21O43680 179 aa6.3□□□□□ -1.4
SPTA1-201ENST00000368147 FCGR2CP31995 323 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms