RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 CCNOP22674 350 aa6.4□□□□□ -1.39
VTA1-202ENST00000367630 TMEM182Q6ZP80 229 aaPredicted RBP6.4□□□□□ -1.39
VTA1-202ENST00000367630 MRPL52Q86TS9 123 aaKnown RBP6.4□□□□□ -1.39
VTA1-202ENST00000367630 ERGIC1Q969X5 290 aa6.4□□□□□ -1.39
VTA1-202ENST00000367630 OR5AC2Q9NZP5 309 aa6.4□□□□□ -1.39
VTA1-202ENST00000367630 MRPS18BQ9Y676 258 aaKnown RBP6.4□□□□□ -1.39
VTA1-202ENST00000367630 GEMIN2O14893 280 aaKnown RBP6.39□□□□□ -1.39
VTA1-202ENST00000367630 CEBPGP53567 150 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 NCR3LG1Q68D85 454 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.39□□□□□ -1.39
VTA1-202ENST00000367630 ACY3Q96HD9 319 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 A0A0B4J293 547 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 K7EQM0 130 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 TRAF3IP2O43734 574 aaPredicted RBP6.39□□□□□ -1.39
VTA1-202ENST00000367630 PPYP01298 95 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 TMEM33P57088 247 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 ZP1P60852 638 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 CD300CQ08708 224 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 ASCL5Q7RTU5 278 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 BHLHE23Q8NDY6 225 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 NOL4LQ96MY1 436 aaPredicted RBP6.39□□□□□ -1.39
VTA1-202ENST00000367630 TOLLIPQ9H0E2 274 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 OR6C3Q9NZP0 311 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 PIKFYVEQ9Y2I7 2098 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 LINC00271P0C7V0 271 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 PSMG4Q5JS54 123 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 ZNF429Q86V71 674 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 COMTD1Q86VU5 262 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 ZADH2Q8N4Q0 377 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 MRPL13Q9BYD1 178 aaKnown RBP6.39□□□□□ -1.39
VTA1-202ENST00000367630 MAGT1Q9H0U3 335 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 TMEM9BQ9NQ34 198 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 SLC45A2Q9UMX9 530 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 KIAA1549LQ6ZVL6 1849 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 CCSO14618 274 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 DVL1O14640 695 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 TIMM8AO60220 97 aaPredicted RBP6.39□□□□□ -1.39
VTA1-202ENST00000367630 VENTXO95231 258 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 HIST1H3AP68431 136 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 GCSAMQ8N6F7 178 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 OR51H1Q8NH63 302 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 RGP1Q92546 391 aaPredicted RBP6.39□□□□□ -1.39
VTA1-202ENST00000367630 S1PR3Q99500 378 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 NPAS1Q99742 590 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 DENND4CQ5VZ89 1909 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 TRAV17A0A0B4J275 112 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 SLC22A20A6NK97 555 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 LINC01565O15544 149 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 CLDN1O95832 211 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 RPL35P42766 123 aaKnown RBP6.39□□□□□ -1.39
VTA1-202ENST00000367630 CEACAM16Q2WEN9 425 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 OR10G3Q8NGC4 313 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 LIN37Q96GY3 246 aaPredicted RBP6.39□□□□□ -1.39
VTA1-202ENST00000367630 ANKRD10Q9NXR5 420 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 PROCRQ9UNN8 238 aa6.39□□□□□ -1.39
VTA1-202ENST00000367630 TNFSF11O14788 317 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 EML2O95834 649 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 FAHP16930 419 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 INSL4Q14641 139 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 C17orf107Q6ZR85 190 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 STXBP6Q8NFX7 210 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 TMEM242Q9NWH2 141 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 CLEC1BQ9P126 229 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 RCC2Q9P258 522 aaKnown RBP6.38□□□□□ -1.39
VTA1-202ENST00000367630 METTL1Q9UBP6 276 aaKnown RBP6.38□□□□□ -1.39
VTA1-202ENST00000367630 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 CTXND1A0A1B0GTU2 59 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 PTBP3O95758 552 aaKnown RBP6.38□□□□□ -1.39
VTA1-202ENST00000367630 WNT2P09544 360 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 FAM3BP58499 235 aaPredicted RBP6.38□□□□□ -1.39
VTA1-202ENST00000367630 C1QL4Q86Z23 238 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 VSTM2AQ8TAG5 236 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 NPRL2Q8WTW4 380 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 THOC3Q96J01 351 aaKnown RBP6.38□□□□□ -1.39
VTA1-202ENST00000367630 IGHV5-10-1A0A0J9YXX1 117 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 CDRT15L2A8MXV6 281 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 HSBP1L1C9JCN9 74 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 CT45A6P0DMU7 189 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 CT45A5P0DMU8 189 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 CT45A7P0DMV0 189 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 GZMHP20718 246 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 HLA-BQ31612 363 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 CT45A1Q5HYN5 189 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 PMS2CLQ68D20 193 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 FAM109BQ6ICB4 259 aaPredicted RBP6.38□□□□□ -1.39
VTA1-202ENST00000367630 CT45A3Q8NHU0 189 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 SLC35E1Q96K37 410 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 COA4Q9NYJ1 87 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 ATP23Q9Y6H3 246 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 ZNF732B4DXR9 585 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 TNFSF15O95150 251 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 NTN1O95631 604 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 OR5AC1P0C628 307 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 EWSR1Q01844 656 aaKnown RBP eCLIP6.38□□□□□ -1.39
VTA1-202ENST00000367630 FZD5Q13467 585 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 ETFDHQ16134 617 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 IQCJQ1A5X6 159 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 TMEM241Q24JQ0 296 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 ACER2Q5QJU3 275 aa6.38□□□□□ -1.39
VTA1-202ENST00000367630 SFRP5Q5T4F7 317 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms