RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 ANKRD37Q7Z713 158 aa12.21□□□□□ -0.45
COL6A1-201ENST00000361866 ZNF383Q8NA42 475 aa12.21□□□□□ -0.45
COL6A1-201ENST00000361866 CLEC18CQ8NCF0 446 aa12.21□□□□□ -0.45
COL6A1-201ENST00000361866 NANOS1Q8WY41 292 aaKnown RBP12.21□□□□□ -0.45
COL6A1-201ENST00000361866 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.21□□□□□ -0.46
COL6A1-201ENST00000361866 PDCD6O75340 191 aa12.21□□□□□ -0.46
COL6A1-201ENST00000361866 IGHV4-34P06331 123 aa12.21□□□□□ -0.46
COL6A1-201ENST00000361866 PPP1CCP36873 323 aaKnown RBP12.21□□□□□ -0.46
COL6A1-201ENST00000361866 SSTP61278 116 aa12.21□□□□□ -0.46
COL6A1-201ENST00000361866 RAB31Q13636 194 aa12.21□□□□□ -0.46
COL6A1-201ENST00000361866 RNF151Q2KHN1 245 aa12.21□□□□□ -0.46
COL6A1-201ENST00000361866 ZNF385AQ96PM9 386 aaKnown RBP12.21□□□□□ -0.46
COL6A1-201ENST00000361866 KLHDC3Q9BQ90 382 aa12.21□□□□□ -0.46
COL6A1-201ENST00000361866 STRADBQ9C0K7 418 aa12.21□□□□□ -0.46
COL6A1-201ENST00000361866 G6PC2Q9NQR9 355 aa12.21□□□□□ -0.46
COL6A1-201ENST00000361866 HSF4Q9ULV5 492 aa12.21□□□□□ -0.46
COL6A1-201ENST00000361866 BOKQ9UMX3 212 aaPredicted RBP12.21□□□□□ -0.46
COL6A1-201ENST00000361866 SCN8AQ9UQD0 1980 aa12.21□□□□□ -0.46
COL6A1-201ENST00000361866 CYB561P49447 251 aa12.2□□□□□ -0.46
COL6A1-201ENST00000361866 NOVA1P51513 510 aaKnown RBP12.2□□□□□ -0.46
COL6A1-201ENST00000361866 FUT6P51993 359 aa12.2□□□□□ -0.46
COL6A1-201ENST00000361866 B2MP61769 119 aa12.2□□□□□ -0.46
COL6A1-201ENST00000361866 FOXK1P85037 733 aa12.2□□□□□ -0.46
COL6A1-201ENST00000361866 GAB4Q2WGN9 574 aa12.2□□□□□ -0.46
COL6A1-201ENST00000361866 RABEPKQ7Z6M1 372 aa12.2□□□□□ -0.46
COL6A1-201ENST00000361866 FAM185AQ8N0U4 392 aa12.2□□□□□ -0.46
COL6A1-201ENST00000361866 POM121Q96HA1 1249 aa12.2□□□□□ -0.46
COL6A1-201ENST00000361866 MEGF10Q96KG7 1140 aa12.2□□□□□ -0.46
COL6A1-201ENST00000361866 REG4Q9BYZ8 158 aa12.2□□□□□ -0.46
COL6A1-201ENST00000361866 POU2F2P09086 479 aa12.2□□□□□ -0.46
COL6A1-201ENST00000361866 GALNSP34059 522 aa12.2□□□□□ -0.46
COL6A1-201ENST00000361866 PTGER4P35408 488 aa12.2□□□□□ -0.46
COL6A1-201ENST00000361866 EWSR1Q01844 656 aaKnown RBP eCLIP12.2□□□□□ -0.46
COL6A1-201ENST00000361866 SMAD4Q13485 552 aaKnown RBP12.2□□□□□ -0.46
COL6A1-201ENST00000361866 ZNF468Q5VIY5 522 aaPredicted RBP12.2□□□□□ -0.46
COL6A1-201ENST00000361866 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.2□□□□□ -0.46
COL6A1-201ENST00000361866 SLC35G3Q8N808 338 aa12.2□□□□□ -0.46
COL6A1-201ENST00000361866 OR6X1Q8NH79 312 aa12.2□□□□□ -0.46
COL6A1-201ENST00000361866 FGF11Q92914 225 aa12.2□□□□□ -0.46
COL6A1-201ENST00000361866 PTX4Q96A99 478 aa12.2□□□□□ -0.46
COL6A1-201ENST00000361866 RIF1Q5UIP0 2472 aaKnown RBP12.2□□□□□ -0.46
COL6A1-201ENST00000361866 A0A1W2PQD3 144 aa12.2□□□□□ -0.46
COL6A1-201ENST00000361866 MS4A18H0YCH9 400 aa12.2□□□□□ -0.46
COL6A1-201ENST00000361866 ZNF816Q0VGE8 651 aaPredicted RBP12.2□□□□□ -0.46
COL6A1-201ENST00000361866 IL13RA2Q14627 380 aa12.2□□□□□ -0.46
COL6A1-201ENST00000361866 MS4A18Q3C1V0 323 aa12.2□□□□□ -0.46
COL6A1-201ENST00000361866 GUSBP11Q6P575 273 aa12.2□□□□□ -0.46
COL6A1-201ENST00000361866 ZNF880Q6PDB4 577 aa12.2□□□□□ -0.46
COL6A1-201ENST00000361866 LRP11Q86VZ4 500 aa12.2□□□□□ -0.46
COL6A1-201ENST00000361866 ADGRG7Q96K78 797 aa12.2□□□□□ -0.46
COL6A1-201ENST00000361866 CACNG5Q9UF02 275 aa12.2□□□□□ -0.46
COL6A1-201ENST00000361866 MTCH2Q9Y6C9 303 aa12.2□□□□□ -0.46
COL6A1-201ENST00000361866 NPIPB9F8W1W9 429 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 CD74P04233 296 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 HKR1P10072 659 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 HLA-DRB3P79483 266 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 VAX1Q5SQQ9 334 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 VHLLQ6RSH7 139 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 SH3BGRL3Q9H299 93 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 WDR90Q96KV7 1748 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 ZNF320A2RRD8 509 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 BTBD17A6NE02 478 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 DHRS7CA6NNS2 312 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 KITLGP21583 273 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 ERVS71-1P61550 626 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 TBC1D26Q86UD7 250 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 CYB561D1Q8N8Q1 229 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 RTN4RQ9BZR6 473 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 SLC25A22Q9H936 323 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 POMT1Q9Y6A1 747 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 DVL1O14640 695 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 PPYP01298 95 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 CTXN2P0C2S0 81 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 SRFP11831 508 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 FCARP24071 287 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 ERGIC1Q969X5 290 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 HIST1H2BAQ96A08 127 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 RASL10BQ96S79 203 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 OR51I2Q9H344 312 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 DUSP13Q9UII6 198 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 V9GYS6 101 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 H0YL77 283 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 TERTO14746 1132 aaKnown RBP12.19□□□□□ -0.46
COL6A1-201ENST00000361866 MBPP02686 304 aaPredicted RBP12.19□□□□□ -0.46
COL6A1-201ENST00000361866 MMP9P14780 707 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 TGFBR3Q03167 851 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 CLN3Q13286 438 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 SURF2Q15527 256 aaPredicted RBP12.19□□□□□ -0.46
COL6A1-201ENST00000361866 SPINK9Q5DT21 86 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 TEX30Q5JUR7 227 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 ZNF574Q6ZN55 896 aaPredicted RBP12.19□□□□□ -0.46
COL6A1-201ENST00000361866 C1QL2Q7Z5L3 287 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 GAPTQ8N292 157 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 RARRES2Q99969 163 aa12.19□□□□□ -0.46
COL6A1-201ENST00000361866 AURKAIP1Q9NWT8 199 aaPredicted RBP12.19□□□□□ -0.46
COL6A1-201ENST00000361866 A0A087X0M5 115 aa12.18□□□□□ -0.46
COL6A1-201ENST00000361866 A0A1B0GX30 115 aa12.18□□□□□ -0.46
COL6A1-201ENST00000361866 LINC00587B1AMM8 73 aa12.18□□□□□ -0.46
COL6A1-201ENST00000361866 MPPED1O15442 326 aa12.18□□□□□ -0.46
COL6A1-201ENST00000361866 MMP7P09237 267 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms