RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 SAT2Q96F10 170 aaPredicted RBP19.46■□□□□ 0.71
LDB1-201ENST00000361198 POM121L2Q96KW2 1035 aa19.46■□□□□ 0.71
LDB1-201ENST00000361198 PAPOLGQ9BWT3 736 aaKnown RBP19.46■□□□□ 0.71
LDB1-201ENST00000361198 MEMO1Q9Y316 297 aa19.46■□□□□ 0.71
LDB1-201ENST00000361198 TAAR5O14804 337 aa19.46■□□□□ 0.71
LDB1-201ENST00000361198 IFNA2P01563 188 aa19.46■□□□□ 0.71
LDB1-201ENST00000361198 HOXB5P09067 269 aa19.46■□□□□ 0.71
LDB1-201ENST00000361198 IL32P24001 234 aa19.46■□□□□ 0.71
LDB1-201ENST00000361198 CCL11P51671 97 aa19.46■□□□□ 0.71
LDB1-201ENST00000361198 PDCD1Q15116 288 aa19.46■□□□□ 0.71
LDB1-201ENST00000361198 GUCA2BQ16661 112 aa19.46■□□□□ 0.71
LDB1-201ENST00000361198 BATF2Q8N1L9 274 aa19.46■□□□□ 0.71
LDB1-201ENST00000361198 APOBEC3DQ96AK3 386 aaPredicted RBP19.46■□□□□ 0.71
LDB1-201ENST00000361198 CMSS1Q9BQ75 279 aaKnown RBP19.46■□□□□ 0.71
LDB1-201ENST00000361198 C1orf123Q9NWV4 160 aa19.46■□□□□ 0.71
LDB1-201ENST00000361198 STARD10Q9Y365 291 aa19.46■□□□□ 0.71
LDB1-201ENST00000361198 SPENQ96T58 3664 aaKnown RBP19.46■□□□□ 0.71
LDB1-201ENST00000361198 SLC22A20A6NK97 555 aa19.45■□□□□ 0.7
LDB1-201ENST00000361198 IL18BPO95998 194 aa19.45■□□□□ 0.7
LDB1-201ENST00000361198 KNG1P01042 644 aa19.45■□□□□ 0.7
LDB1-201ENST00000361198 SRSF3P84103 164 aaKnown RBP19.45■□□□□ 0.7
LDB1-201ENST00000361198 HIKESHIQ53FT3 197 aa19.45■□□□□ 0.7
LDB1-201ENST00000361198 FDCSPQ8NFU4 85 aa19.45■□□□□ 0.7
LDB1-201ENST00000361198 SMIM8Q96KF7 97 aa19.45■□□□□ 0.7
LDB1-201ENST00000361198 ANXA10Q9UJ72 324 aa19.45■□□□□ 0.7
LDB1-201ENST00000361198 WT1P19544 449 aaPredicted RBP19.45■□□□□ 0.7
LDB1-201ENST00000361198 OPRM1P35372 400 aa19.45■□□□□ 0.7
LDB1-201ENST00000361198 EIF5AP63241 154 aaKnown RBP19.45■□□□□ 0.7
LDB1-201ENST00000361198 PJVKQ0ZLH3 352 aa19.45■□□□□ 0.7
LDB1-201ENST00000361198 RBM39Q14498 530 aaKnown RBP19.45■□□□□ 0.7
LDB1-201ENST00000361198 SLC25A26Q70HW3 274 aa19.45■□□□□ 0.7
LDB1-201ENST00000361198 LDLRAD3Q86YD5 345 aa19.45■□□□□ 0.7
LDB1-201ENST00000361198 CNTNAP3BQ96NU0 1288 aa19.45■□□□□ 0.7
LDB1-201ENST00000361198 GSKIPQ9P0R6 139 aa19.45■□□□□ 0.7
LDB1-201ENST00000361198 EDARQ9UNE0 448 aa19.45■□□□□ 0.7
LDB1-201ENST00000361198 ZNF705EA8MWA4 302 aaPredicted RBP19.44■□□□□ 0.7
LDB1-201ENST00000361198 CTSDP07339 412 aaPredicted RBP19.44■□□□□ 0.7
LDB1-201ENST00000361198 NPBWR2P48146 333 aa19.44■□□□□ 0.7
LDB1-201ENST00000361198 MALLQ13021 153 aa19.44■□□□□ 0.7
LDB1-201ENST00000361198 PRDX4Q13162 271 aa19.44■□□□□ 0.7
LDB1-201ENST00000361198 MRPL21Q7Z2W9 205 aaKnown RBP19.44■□□□□ 0.7
LDB1-201ENST00000361198 ZNF2Q9BSG1 426 aaPredicted RBP19.44■□□□□ 0.7
LDB1-201ENST00000361198 CNTNAP3Q9BZ76 1288 aa19.44■□□□□ 0.7
LDB1-201ENST00000361198 FGF23Q9GZV9 251 aaPredicted RBP19.44■□□□□ 0.7
LDB1-201ENST00000361198 SS18L1O75177 396 aaPredicted RBP19.44■□□□□ 0.7
LDB1-201ENST00000361198 RBMXP38159 391 aaKnown RBP19.44■□□□□ 0.7
LDB1-201ENST00000361198 PLP2Q04941 152 aa19.44■□□□□ 0.7
LDB1-201ENST00000361198 TNRC6AQ8NDV7 1962 aaKnown RBP19.43■□□□□ 0.7
LDB1-201ENST00000361198 NDUFA2O43678 99 aa19.43■□□□□ 0.7
LDB1-201ENST00000361198 FCGR3AP08637 254 aa19.43■□□□□ 0.7
LDB1-201ENST00000361198 HKR1P10072 659 aa19.43■□□□□ 0.7
LDB1-201ENST00000361198 FLI1Q01543 452 aaPredicted RBP19.43■□□□□ 0.7
LDB1-201ENST00000361198 DAZAP2Q15038 168 aaPredicted RBP19.43■□□□□ 0.7
LDB1-201ENST00000361198 FBXW9Q5XUX1 488 aa19.43■□□□□ 0.7
LDB1-201ENST00000361198 EIF5AL1Q6IS14 154 aaKnown RBP19.43■□□□□ 0.7
LDB1-201ENST00000361198 HPSE2Q8WWQ2 592 aa19.43■□□□□ 0.7
LDB1-201ENST00000361198 SEC11CQ9BY50 192 aa19.43■□□□□ 0.7
LDB1-201ENST00000361198 TLNRD1Q9H1K6 362 aa19.43■□□□□ 0.7
LDB1-201ENST00000361198 PQLC2LA1A4F0 135 aa19.42■□□□□ 0.7
LDB1-201ENST00000361198 FAM221AA4D161 298 aa19.42■□□□□ 0.7
LDB1-201ENST00000361198 F8W036 122 aa19.42■□□□□ 0.7
LDB1-201ENST00000361198 RBM11P57052 281 aaKnown RBP19.42■□□□□ 0.7
LDB1-201ENST00000361198 BLOC1S1P78537 153 aa19.42■□□□□ 0.7
LDB1-201ENST00000361198 TMEM200AQ86VY9 491 aa19.42■□□□□ 0.7
LDB1-201ENST00000361198 SGPP2Q8IWX5 399 aa19.42■□□□□ 0.7
LDB1-201ENST00000361198 OR1K1Q8NGR3 316 aa19.42■□□□□ 0.7
LDB1-201ENST00000361198 OR2S2Q9NQN1 319 aa19.42■□□□□ 0.7
LDB1-201ENST00000361198 UQCC1Q9NVA1 299 aa19.42■□□□□ 0.7
LDB1-201ENST00000361198 NDRG3Q9UGV2 375 aa19.42■□□□□ 0.7
LDB1-201ENST00000361198 TUBD1Q9UJT1 453 aa19.42■□□□□ 0.7
LDB1-201ENST00000361198 CRYM-AS1A6NIL9 109 aa19.42■□□□□ 0.7
LDB1-201ENST00000361198 DTYMKP23919 212 aa19.42■□□□□ 0.7
LDB1-201ENST00000361198 S100A10P60903 97 aa19.42■□□□□ 0.7
LDB1-201ENST00000361198 IAH1Q2TAA2 248 aaPredicted RBP19.42■□□□□ 0.7
LDB1-201ENST00000361198 LIME1Q9H400 295 aa19.42■□□□□ 0.7
LDB1-201ENST00000361198 GPM6AP51674 278 aa19.41■□□□□ 0.7
LDB1-201ENST00000361198 CLN3Q13286 438 aa19.41■□□□□ 0.7
LDB1-201ENST00000361198 RPL7L1Q6DKI1 246 aaKnown RBP19.41■□□□□ 0.7
LDB1-201ENST00000361198 DHRS7BQ6IAN0 325 aaPredicted RBP19.41■□□□□ 0.7
LDB1-201ENST00000361198 FAM219AQ8IW50 185 aa19.41■□□□□ 0.7
LDB1-201ENST00000361198 TAF9BQ9HBM6 251 aa19.41■□□□□ 0.7
LDB1-201ENST00000361198 OR5H8P0DN80 308 aa19.41■□□□□ 0.7
LDB1-201ENST00000361198 HAAOP46952 286 aa19.41■□□□□ 0.7
LDB1-201ENST00000361198 BCL2L2Q92843 193 aaPredicted RBP19.41■□□□□ 0.7
LDB1-201ENST00000361198 SHANK1Q9Y566 2161 aa19.4■□□□□ 0.7
LDB1-201ENST00000361198 PDCD6O75340 191 aa19.4■□□□□ 0.7
LDB1-201ENST00000361198 WISP2O76076 250 aa19.4■□□□□ 0.7
LDB1-201ENST00000361198 WNT5AP41221 380 aa19.4■□□□□ 0.7
LDB1-201ENST00000361198 CAV2P51636 162 aa19.4■□□□□ 0.7
LDB1-201ENST00000361198 CEACAM21Q3KPI0 293 aa19.4■□□□□ 0.7
LDB1-201ENST00000361198 DHRS11Q6UWP2 260 aa19.4■□□□□ 0.7
LDB1-201ENST00000361198 ZDHHC23Q8IYP9 409 aa19.4■□□□□ 0.7
LDB1-201ENST00000361198 OR7C1O76099 320 aaPredicted RBP19.4■□□□□ 0.7
LDB1-201ENST00000361198 ZNF205O95201 554 aa19.4■□□□□ 0.7
LDB1-201ENST00000361198 CST4P01036 141 aa19.4■□□□□ 0.7
LDB1-201ENST00000361198 GAPDHP04406 335 aaKnown RBP19.4■□□□□ 0.7
LDB1-201ENST00000361198 APLNRP35414 380 aa19.4■□□□□ 0.7
LDB1-201ENST00000361198 HFEQ30201 348 aa19.4■□□□□ 0.7
LDB1-201ENST00000361198 TMEM268Q5VZI3 342 aa19.4■□□□□ 0.7
LDB1-201ENST00000361198 OR10Z1Q8NGY1 313 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms