RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 DHRS13Q6UX07 377 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 LIAT1Q6ZQX7 453 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 OR11H4Q8NGC9 324 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 SARGQ9BW04 601 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 RAB33BQ9H082 229 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 LIPGQ9Y5X9 500 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 K7EQM0 130 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 PIN1P1O15428 100 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 CCL4P13236 92 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 FGF8P55075 233 aaPredicted RBP12.09□□□□□ -0.47
VCP-201ENST00000358901 TRA2AQ13595 282 aaKnown RBP eCLIP12.09□□□□□ -0.47
VCP-201ENST00000358901 OR2A2Q6IF42 318 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 RGS7BPQ6MZT1 257 aaPredicted RBP12.09□□□□□ -0.47
VCP-201ENST00000358901 MOB1BQ7L9L4 216 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 LYZL2Q7Z4W2 148 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 SLC25A22Q9H936 323 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 SLC35D1Q9NTN3 355 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 WNT16Q9UBV4 365 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 PSG11Q9UQ72 335 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 KCNK7Q9Y2U2 307 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 ROS1P08922 2347 aa12.09□□□□□ -0.47
VCP-201ENST00000358901 A0A1W2PPH5 198 aa12.08□□□□□ -0.48
VCP-201ENST00000358901 FCGR3BO75015 233 aa12.08□□□□□ -0.48
VCP-201ENST00000358901 C17orf78Q8N4C9 275 aa12.08□□□□□ -0.48
VCP-201ENST00000358901 FAM210BQ96KR6 192 aa12.08□□□□□ -0.48
VCP-201ENST00000358901 OCIAD1Q9NX40 245 aa12.08□□□□□ -0.48
VCP-201ENST00000358901 TNFSF18Q9UNG2 199 aa12.08□□□□□ -0.48
VCP-201ENST00000358901 A0A1W2PP11 408 aa12.08□□□□□ -0.48
VCP-201ENST00000358901 C7orf77A4D0Y5 90 aa12.08□□□□□ -0.48
VCP-201ENST00000358901 RBFOX3A6NFN3 312 aa12.08□□□□□ -0.48
VCP-201ENST00000358901 SPRY3O43610 288 aa12.08□□□□□ -0.48
VCP-201ENST00000358901 IGHV4-34P06331 123 aa12.08□□□□□ -0.48
VCP-201ENST00000358901 VDAC1P21796 283 aa12.08□□□□□ -0.48
VCP-201ENST00000358901 TMEM241Q24JQ0 296 aa12.08□□□□□ -0.48
VCP-201ENST00000358901 DEFB109BQ30KR1 87 aa12.08□□□□□ -0.48
VCP-201ENST00000358901 TBC1D26Q86UD7 250 aa12.08□□□□□ -0.48
VCP-201ENST00000358901 OR2Z1Q8NG97 314 aa12.08□□□□□ -0.48
VCP-201ENST00000358901 LHFPL5Q8TAF8 219 aa12.08□□□□□ -0.48
VCP-201ENST00000358901 ACY3Q96HD9 319 aa12.08□□□□□ -0.48
VCP-201ENST00000358901 SDHCQ99643 169 aaPredicted RBP12.08□□□□□ -0.48
VCP-201ENST00000358901 KLK13Q9UKR3 277 aa12.08□□□□□ -0.48
VCP-201ENST00000358901 QSER1Q2KHR3 1735 aa12.08□□□□□ -0.48
VCP-201ENST00000358901 CHST1O43916 411 aa12.08□□□□□ -0.48
VCP-201ENST00000358901 PPYP01298 95 aa12.08□□□□□ -0.48
VCP-201ENST00000358901 UBAC2Q8NBM4 344 aa12.08□□□□□ -0.48
VCP-201ENST00000358901 TMPRSS5Q9H3S3 457 aa12.08□□□□□ -0.48
VCP-201ENST00000358901 PNPP00491 289 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 CD1AP06126 327 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 FABP1P07148 127 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 CCL3P10147 92 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 BMP5P22003 454 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 S100A7P31151 101 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 OR3A1P47881 315 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 PPP1CBP62140 327 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 Q3ZCU0 254 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 OR2Y1Q8NGV0 311 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 BOD1Q96IK1 185 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 POMT1Q9Y6A1 747 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 SHISA3A0PJX4 238 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 NGFRP08138 427 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 ERVFC1-1P60608 527 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 RNPS1Q15287 305 aaKnown RBP12.07□□□□□ -0.48
VCP-201ENST00000358901 ZNF721Q8TF20 911 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 HDHD3Q9BSH5 251 aaPredicted RBP12.07□□□□□ -0.48
VCP-201ENST00000358901 DXOO77932 396 aaKnown RBP12.07□□□□□ -0.48
VCP-201ENST00000358901 HPP00738 406 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 F12P00748 615 aaPredicted RBP12.07□□□□□ -0.48
VCP-201ENST00000358901 CT45A10P0DMU9 189 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 MEOX2P50222 304 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 SPINK9Q5DT21 86 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 SPINK14Q6IE38 97 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 DEFB123Q8N688 67 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 CLCF1Q9UBD9 225 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 FZR1Q9UM11 496 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 ESPL1Q14674 2120 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 IGHV3-43A0A0B4J1X8 118 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 SIGLEC5O15389 551 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 UPK3AO75631 287 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 LYZL6O75951 148 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 IGHV3-13P01766 116 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 IGHV3-7P01780 117 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 IGHV3-43DP0DP04 118 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 DYNLT3P51808 116 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 SIGLEC14Q08ET2 396 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 OR6S1Q8NH40 331 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 SEC11CQ9BY50 192 aa12.07□□□□□ -0.48
VCP-201ENST00000358901 TDRD15B5MCY1 1934 aaKnown RBP12.06□□□□□ -0.48
VCP-201ENST00000358901 TRGV10A0A0A0MS01 117 aa12.06□□□□□ -0.48
VCP-201ENST00000358901 CHEK1O14757 476 aa12.06□□□□□ -0.48
VCP-201ENST00000358901 TOX3O15405 576 aaPredicted RBP12.06□□□□□ -0.48
VCP-201ENST00000358901 CHRNA7P36544 502 aa12.06□□□□□ -0.48
VCP-201ENST00000358901 KRTDAPP60985 99 aa12.06□□□□□ -0.48
VCP-201ENST00000358901 HLA-DRB3P79483 266 aa12.06□□□□□ -0.48
VCP-201ENST00000358901 PIGYQ3MUY2 71 aa12.06□□□□□ -0.48
VCP-201ENST00000358901 ZNF385AQ96PM9 386 aaKnown RBP12.06□□□□□ -0.48
VCP-201ENST00000358901 SMOC1Q9H4F8 434 aa12.06□□□□□ -0.48
VCP-201ENST00000358901 STARD10Q9Y365 291 aa12.06□□□□□ -0.48
VCP-201ENST00000358901 LRRC37AA6NMS7 1700 aa12.06□□□□□ -0.48
VCP-201ENST00000358901 OR5B21A6NL26 309 aa12.06□□□□□ -0.48
VCP-201ENST00000358901 ADH4P08319 380 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms