RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 FGFBP3Q8TAT2 258 aa12.37□□□□□ -0.43
SIRPA-202ENST00000358771 DHRS9Q9BPW9 319 aa12.37□□□□□ -0.43
SIRPA-202ENST00000358771 SPACA1Q9HBV2 294 aa12.37□□□□□ -0.43
SIRPA-202ENST00000358771 SLC2A9Q9NRM0 540 aa12.37□□□□□ -0.43
SIRPA-202ENST00000358771 ZNF107Q9UII5 783 aaPredicted RBP12.37□□□□□ -0.43
SIRPA-202ENST00000358771 PUS1Q9Y606 427 aaKnown RBP eCLIP12.37□□□□□ -0.43
SIRPA-202ENST00000358771 C21orf140B9A014 251 aa12.36□□□□□ -0.43
SIRPA-202ENST00000358771 MFNGO00587 321 aa12.36□□□□□ -0.43
SIRPA-202ENST00000358771 DNPH1O43598 174 aa12.36□□□□□ -0.43
SIRPA-202ENST00000358771 RNPS1Q15287 305 aaKnown RBP12.36□□□□□ -0.43
SIRPA-202ENST00000358771 C10orf128Q5T292 105 aa12.36□□□□□ -0.43
SIRPA-202ENST00000358771 BPIFCQ8NFQ6 507 aa12.36□□□□□ -0.43
SIRPA-202ENST00000358771 FBXL17Q9UF56 701 aa12.36□□□□□ -0.43
SIRPA-202ENST00000358771 FOXG1P55316 489 aaPredicted RBP12.36□□□□□ -0.43
SIRPA-202ENST00000358771 FAHD2BQ6P2I3 314 aaPredicted RBP12.36□□□□□ -0.43
SIRPA-202ENST00000358771 PRSS54Q6PEW0 395 aa12.36□□□□□ -0.43
SIRPA-202ENST00000358771 FAHD2AQ96GK7 314 aa12.36□□□□□ -0.43
SIRPA-202ENST00000358771 SUCNR1Q9BXA5 334 aa12.36□□□□□ -0.43
SIRPA-202ENST00000358771 A0A0A6YYD4 124 aa12.36□□□□□ -0.43
SIRPA-202ENST00000358771 CDIPTO14735 213 aa12.36□□□□□ -0.43
SIRPA-202ENST00000358771 COL19A1Q14993 1142 aa12.36□□□□□ -0.43
SIRPA-202ENST00000358771 BMPERQ8N8U9 685 aa12.36□□□□□ -0.43
SIRPA-202ENST00000358771 NAA60Q9H7X0 242 aa12.36□□□□□ -0.43
SIRPA-202ENST00000358771 E9PLN8 166 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 B3GALNT1O75752 331 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 JTBO76095 146 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 AGFG2O95081 481 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 IGHV3-13P01766 116 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 IGHV3-7P01780 117 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 RCC1P18754 421 aaPredicted RBP12.35□□□□□ -0.43
SIRPA-202ENST00000358771 NOVA1P51513 510 aaKnown RBP12.35□□□□□ -0.43
SIRPA-202ENST00000358771 TMEM33P57088 247 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 RPL23AP62750 156 aaKnown RBP12.35□□□□□ -0.43
SIRPA-202ENST00000358771 FAM3AP98173 230 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 VAX1Q5SQQ9 334 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 TMEM123Q8N131 208 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 FAM58AQ8N1B3 248 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 ZIC4Q8N9L1 334 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 OR5T1Q8NG75 326 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 WNT2BQ93097 391 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 TMEM54Q969K7 222 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 RNF166Q96A37 237 aaPredicted RBP12.35□□□□□ -0.43
SIRPA-202ENST00000358771 PIEZO2Q9H5I5 2752 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 CYC1P08574 325 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 FCGR3AP08637 254 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 OR13C7P0DN81 318 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 IAPPP10997 89 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 RPS16P62249 146 aaKnown RBP12.35□□□□□ -0.43
SIRPA-202ENST00000358771 OR8G2PQ6IF36 304 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 FAM166AQ6J272 317 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 NUFIP2Q7Z417 695 aaKnown RBP12.35□□□□□ -0.43
SIRPA-202ENST00000358771 MUCL1Q96DR8 90 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 PBDC1Q9BVG4 233 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 CNTNAP3Q9BZ76 1288 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 ZNF391Q9UJN7 358 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 RCL1Q9Y2P8 373 aaKnown RBP12.35□□□□□ -0.43
SIRPA-202ENST00000358771 IGLV3-32A0A0A0MS00 114 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 E5RGE8 158 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 CLDN1O95832 211 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 Q0VFX4 171 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 OR2G3Q8NGZ4 309 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 ASB13Q8WXK3 278 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 NKX6-2Q9C056 277 aaPredicted RBP12.35□□□□□ -0.43
SIRPA-202ENST00000358771 SLC25A31Q9H0C2 315 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 NSG2Q9Y328 171 aa12.35□□□□□ -0.43
SIRPA-202ENST00000358771 P2RY4P51582 365 aa12.34□□□□□ -0.43
SIRPA-202ENST00000358771 POLR2GP62487 172 aaKnown RBP eCLIP12.34□□□□□ -0.43
SIRPA-202ENST00000358771 RPUSD3Q6P087 351 aaKnown RBP12.34□□□□□ -0.43
SIRPA-202ENST00000358771 CALHM1Q8IU99 346 aa12.34□□□□□ -0.43
SIRPA-202ENST00000358771 ZNF709Q8N972 641 aa12.34□□□□□ -0.43
SIRPA-202ENST00000358771 ZC3H10Q96K80 434 aaKnown RBP12.34□□□□□ -0.43
SIRPA-202ENST00000358771 ADAT1Q9BUB4 502 aaKnown RBP12.34□□□□□ -0.43
SIRPA-202ENST00000358771 TINAGQ9UJW2 476 aa12.34□□□□□ -0.43
SIRPA-202ENST00000358771 SYNGR1O43759 233 aa12.34□□□□□ -0.43
SIRPA-202ENST00000358771 SNAPINO95295 136 aa12.34□□□□□ -0.43
SIRPA-202ENST00000358771 PPYP01298 95 aa12.34□□□□□ -0.43
SIRPA-202ENST00000358771 ACP1P24666 158 aa12.34□□□□□ -0.43
SIRPA-202ENST00000358771 MDP1Q86V88 176 aa12.34□□□□□ -0.43
SIRPA-202ENST00000358771 ZFP62Q8NB50 900 aaPredicted RBP12.34□□□□□ -0.43
SIRPA-202ENST00000358771 SPEGQ15772 3267 aa12.34□□□□□ -0.43
SIRPA-202ENST00000358771 FAM24AA6NFZ4 105 aa12.34□□□□□ -0.43
SIRPA-202ENST00000358771 ZNF735P0CB33 412 aa12.34□□□□□ -0.43
SIRPA-202ENST00000358771 NHLRC3Q5JS37 347 aa12.34□□□□□ -0.43
SIRPA-202ENST00000358771 ZADH2Q8N4Q0 377 aa12.34□□□□□ -0.43
SIRPA-202ENST00000358771 BVESQ8NE79 360 aa12.34□□□□□ -0.43
SIRPA-202ENST00000358771 SARAFQ96BY9 339 aa12.34□□□□□ -0.43
SIRPA-202ENST00000358771 OR2J1Q9GZK6 312 aa12.34□□□□□ -0.43
SIRPA-202ENST00000358771 CTSDP07339 412 aaPredicted RBP12.33□□□□□ -0.44
SIRPA-202ENST00000358771 FAM209AQ5JX71 171 aa12.33□□□□□ -0.44
SIRPA-202ENST00000358771 LY6G6FQ5SQ64 297 aa12.33□□□□□ -0.44
SIRPA-202ENST00000358771 OR2A2Q6IF42 318 aa12.33□□□□□ -0.44
SIRPA-202ENST00000358771 SLC38A6Q8IZM9 456 aa12.33□□□□□ -0.44
SIRPA-202ENST00000358771 SFT2D1Q8WV19 159 aa12.33□□□□□ -0.44
SIRPA-202ENST00000358771 HEXA-AS1Q9H8Q6 139 aa12.33□□□□□ -0.44
SIRPA-202ENST00000358771 POLDIP2Q9Y2S7 368 aa12.33□□□□□ -0.44
SIRPA-202ENST00000358771 NPTNQ9Y639 398 aa12.33□□□□□ -0.44
SIRPA-202ENST00000358771 TUBAL3A6NHL2 446 aa12.33□□□□□ -0.44
SIRPA-202ENST00000358771 GPR31O00270 319 aa12.33□□□□□ -0.44
SIRPA-202ENST00000358771 ADAM20O43506 726 aa12.33□□□□□ -0.44
SIRPA-202ENST00000358771 ZNF14P17017 642 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms