RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 ZFP36L2P47974 494 aaKnown RBP6.46□□□□□ -1.38
VPS13A-202ENST00000357409 PJVKQ0ZLH3 352 aa6.46□□□□□ -1.38
VPS13A-202ENST00000357409 ASAH1Q13510 395 aa6.46□□□□□ -1.38
VPS13A-202ENST00000357409 TBC1D26Q86UD7 250 aa6.46□□□□□ -1.38
VPS13A-202ENST00000357409 APOBEC3DQ96AK3 386 aaPredicted RBP6.46□□□□□ -1.38
VPS13A-202ENST00000357409 TUBA4BQ9H853 241 aa6.46□□□□□ -1.38
VPS13A-202ENST00000357409 SCPEP1Q9HB40 452 aa6.46□□□□□ -1.38
VPS13A-202ENST00000357409 INPP5EQ9NRR6 644 aa6.46□□□□□ -1.38
VPS13A-202ENST00000357409 A0A0J9YW62 118 aa6.46□□□□□ -1.38
VPS13A-202ENST00000357409 DMRTA1Q5VZB9 504 aa6.46□□□□□ -1.38
VPS13A-202ENST00000357409 OR4X1Q8NH49 305 aa6.46□□□□□ -1.38
VPS13A-202ENST00000357409 RNASEK-C17orf49H0YIS7 233 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 CD160O95971 181 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 BTF3P20290 206 aaKnown RBP6.45□□□□□ -1.38
VPS13A-202ENST00000357409 GAB4Q2WGN9 574 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 SPATS1Q496A3 300 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 MIDNQ504T8 468 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 C17orf47Q8NEP4 570 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 HARBI1Q96MB7 349 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 CHST1O43916 411 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 HSBP1O75506 76 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 PRR35P0CG20 571 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 MRPS10P82664 201 aaKnown RBP6.45□□□□□ -1.38
VPS13A-202ENST00000357409 TIGITQ495A1 244 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 MZB1Q8WU39 189 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 CORO2AQ92828 525 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 PCED1AQ9H1Q7 454 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 RBFOX1Q9NWB1 397 aaKnown RBP6.45□□□□□ -1.38
VPS13A-202ENST00000357409 VSIG10L2P0DP72 767 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 GABRA1P14867 456 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 PSMB6P28072 239 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 FCGR2BP31994 310 aaPredicted RBP6.45□□□□□ -1.38
VPS13A-202ENST00000357409 SMIM21Q3B7S5 101 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 MARVELD3Q96A59 401 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 MRGPRFQ96AM1 343 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 ALG14Q96F25 216 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 METTL1Q9UBP6 276 aaKnown RBP6.45□□□□□ -1.38
VPS13A-202ENST00000357409 VAMP5O95183 116 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 IGLV3-25P01717 112 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 CDK5Q00535 292 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 PSG6Q00889 435 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 C5orf46Q6UWT4 87 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 ZNF574Q6ZN55 896 aaPredicted RBP6.45□□□□□ -1.38
VPS13A-202ENST00000357409 OR5C1Q8NGR4 320 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 ZNF629Q9UEG4 869 aaPredicted RBP6.45□□□□□ -1.38
VPS13A-202ENST00000357409 TUBD1Q9UJT1 453 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 PMS2P2O95744 297 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 HAND1O96004 215 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 EPXP11678 715 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 OTX1P32242 354 aaPredicted RBP6.45□□□□□ -1.38
VPS13A-202ENST00000357409 PPP1CCP36873 323 aaKnown RBP6.45□□□□□ -1.38
VPS13A-202ENST00000357409 MMP15P51511 669 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 MRPL54Q6P161 138 aaKnown RBP6.45□□□□□ -1.38
VPS13A-202ENST00000357409 RNF165Q6ZSG1 346 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 VN1R4Q7Z5H5 301 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 SLC25A45Q8N413 288 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 GPBAR1Q8TDU6 330 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 ITPKCQ96DU7 683 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 TMEFF2Q9UIK5 374 aaPredicted RBP6.45□□□□□ -1.38
VPS13A-202ENST00000357409 MOSPD3O75425 235 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 RAB5AP20339 215 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 SKP2Q13309 424 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 DCAF10Q5QP82 559 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 GGNBP1Q5YKI7 109 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 TLNRD1Q9H1K6 362 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 SLC25A10Q9UBX3 287 aaPredicted RBP6.45□□□□□ -1.38
VPS13A-202ENST00000357409 ANKRD26Q9UPS8 1709 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 TRAV38-1A0A0B4J264 116 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 ASPDHA6ND91 283 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 TGFBR3LH3BV60 316 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 IGHA1P01876 353 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 IGHA2P01877 340 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 CELA3AP09093 270 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 S100A7P31151 101 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 BHLHA9Q7RTU4 235 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 NUBPLQ8TB37 319 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 KCNMB2Q9Y691 235 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 A0A1W2PQF6 199 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 hADV38S2A0JD32 116 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 IGHV3-11P01762 117 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 MT-ND4LP03901 98 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 KIR2DL1P43626 348 aaPredicted RBP6.45□□□□□ -1.38
VPS13A-202ENST00000357409 RAB5CP51148 216 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 RPL30P62888 115 aaKnown RBP6.45□□□□□ -1.38
VPS13A-202ENST00000357409 SIGLECL1Q8N7X8 197 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 NKAIN3Q8N8D7 197 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 OTOSQ8NHW6 89 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 ST8SIA1Q92185 356 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 WFIKKN1Q96NZ8 548 aa6.45□□□□□ -1.38
VPS13A-202ENST00000357409 LIN7CQ9NUP9 197 aaKnown RBP6.45□□□□□ -1.38
VPS13A-202ENST00000357409 THY1P04216 161 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 EGR1P18146 543 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 ETFRF1Q6IPR1 90 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 D2HGDHQ8N465 521 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 C16orf92Q96LL3 132 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 SLC7A10Q9NS82 523 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 TRAPPC1Q9Y5R8 145 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 TMEM229AB2RXF0 380 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 HPXP02790 462 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 STXBP6Q8NFX7 210 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms