RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 OR52B4Q8NGK2 314 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 OR1L1Q8NH94 360 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 DDA1Q9BW61 102 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 DBX1A6NMT0 343 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 C1SP09871 688 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 SLC25A6P12236 298 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 OR3A1P47881 315 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 ANKRD55Q3KP44 614 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 VN1R2Q8NFZ6 395 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 CDX2Q99626 313 aaPredicted RBP5.87□□□□□ -1.47
VPS13B-202ENST00000357162 COL24A1Q17RW2 1714 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 PLXND1Q9Y4D7 1925 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 WTIPA6NIX2 430 aaPredicted RBP5.87□□□□□ -1.47
VPS13B-202ENST00000357162 RPS20P60866 119 aaKnown RBP5.87□□□□□ -1.47
VPS13B-202ENST00000357162 C19orf48Q6RUI8 117 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 OSR2Q8N2R0 312 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 LDB3O75112 727 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 OR1C1Q15619 314 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 PAPPA-AS1Q5QFB9 102 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 LINC00469Q8N7U9 141 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 HIF1ANQ9NWT6 349 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 ADAP1O75689 374 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 HAAOP46952 286 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 FAM209BQ5JX69 171 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 TMEM25Q86YD3 366 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 FOXN4Q96NZ1 517 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 GAL3ST2Q9H3Q3 398 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 TMEM231Q9H6L2 316 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 OR6C3Q9NZP0 311 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.86□□□□□ -1.47
VPS13B-202ENST00000357162 ZNF79Q15937 498 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 TUSC1Q2TAM9 212 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 ERGIC1Q969X5 290 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 SLC25A33Q9BSK2 321 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 MRPS16Q9Y3D3 137 aaKnown RBP5.86□□□□□ -1.47
VPS13B-202ENST00000357162 TRBV23OR9-2A0A075B6M9 112 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 UBE2L5PA0A1B0GUS4 154 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 CD74P04233 296 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 HFEQ30201 348 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 PLPPR5Q32ZL2 321 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 SPANXN5Q5MJ07 72 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 OR4F17Q8NGA8 305 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 DYRK2Q92630 601 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 PLA2G12AQ9BZM1 189 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 TMEM242Q9NWH2 141 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 AKAP13Q12802 2813 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 A0A0A6YYC8 382 aaPredicted RBP5.86□□□□□ -1.47
VPS13B-202ENST00000357162 I3L1I5 382 aaPredicted RBP5.86□□□□□ -1.47
VPS13B-202ENST00000357162 PFN4Q8NHR9 129 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 RHBDD1Q8TEB9 315 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 FBLL1A6NHQ2 334 aaKnown RBP5.86□□□□□ -1.47
VPS13B-202ENST00000357162 OR4C45A6NMZ5 311 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 SDCBPO00560 298 aaPredicted RBP5.86□□□□□ -1.47
VPS13B-202ENST00000357162 FAM24BQ8N5W8 94 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 ZNF740Q8NDX6 193 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 TINAGL1Q9GZM7 467 aaPredicted RBP5.86□□□□□ -1.47
VPS13B-202ENST00000357162 TRBV11-1A0A0K0K1C0 115 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 H0Y980 276 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 DTX3Q8N9I9 347 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 INSM2Q96T92 566 aaPredicted RBP5.86□□□□□ -1.47
VPS13B-202ENST00000357162 OR5I1Q13606 314 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 ARSJQ5FYB0 599 aaPredicted RBP5.86□□□□□ -1.47
VPS13B-202ENST00000357162 DHRS11Q6UWP2 260 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 LTBP4Q8N2S1 1624 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 PLA2G10O15496 165 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 CA3P07451 260 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 CLDN17P56750 224 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 PARM1Q6UWI2 310 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 DLK2Q6UY11 383 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 BOLLQ8N9W6 283 aaKnown RBP5.86□□□□□ -1.47
VPS13B-202ENST00000357162 TMEM40Q8WWA1 233 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 FER1L6-AS2Q96M78 137 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 ASB16Q96NS5 453 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 GGACTQ9BVM4 153 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 C1QTNF6Q9BXI9 259 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 DNAJB12Q9NXW2 375 aaKnown RBP5.86□□□□□ -1.47
VPS13B-202ENST00000357162 STARD10Q9Y365 291 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 ALPK3Q96L96 1907 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 FAM171A2A8MVW0 826 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 KLF7O75840 302 aaPredicted RBP5.86□□□□□ -1.47
VPS13B-202ENST00000357162 NUDT3O95989 172 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 Q6AWC8 147 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 REC114Q7Z4M0 266 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 MRPL43Q8N983 215 aaKnown RBP5.86□□□□□ -1.47
VPS13B-202ENST00000357162 C16orf52Q8NHV5 167 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 RALYQ9UKM9 306 aaKnown RBP5.86□□□□□ -1.47
VPS13B-202ENST00000357162 HSF4Q9ULV5 492 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 NR0B2Q15466 257 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 KISS1Q15726 138 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 BTLAQ7Z6A9 289 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 MRGPREQ86SM8 312 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 SPNS2Q8IVW8 549 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 H3BSH0 61 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 COX6CP09669 75 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 ZNF17P17021 662 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 HTR1DP28221 377 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 GAMTQ14353 236 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 OR2B11Q5JQS5 317 aa5.86□□□□□ -1.47
VPS13B-202ENST00000357162 MRPL54Q6P161 138 aaKnown RBP5.86□□□□□ -1.47
VPS13B-202ENST00000357162 IL19Q9UHD0 177 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms