RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 PRDM13Q9H4Q3 707 aa8.79□□□□□ -1
PTPRA-203ENST00000356147 WDFY4Q6ZS81 3184 aa8.79□□□□□ -1
PTPRA-203ENST00000356147 ZFP92A6NM28 416 aa8.79□□□□□ -1
PTPRA-203ENST00000356147 TMEM50AO95807 157 aa8.79□□□□□ -1
PTPRA-203ENST00000356147 LCATP04180 440 aa8.79□□□□□ -1
PTPRA-203ENST00000356147 SRP19P09132 144 aaKnown RBP8.79□□□□□ -1
PTPRA-203ENST00000356147 MMP9P14780 707 aa8.79□□□□□ -1
PTPRA-203ENST00000356147 PMELP40967 661 aa8.79□□□□□ -1
PTPRA-203ENST00000356147 FGF8P55075 233 aaPredicted RBP8.79□□□□□ -1
PTPRA-203ENST00000356147 GRB2P62993 217 aaKnown RBP8.79□□□□□ -1
PTPRA-203ENST00000356147 OR2T2Q6IF00 324 aa8.79□□□□□ -1
PTPRA-203ENST00000356147 LGI3Q8N145 548 aa8.79□□□□□ -1
PTPRA-203ENST00000356147 C14orf144Q96I85 54 aa8.79□□□□□ -1
PTPRA-203ENST00000356147 SSX3Q99909 188 aa8.79□□□□□ -1
PTPRA-203ENST00000356147 ZNF442Q9H7R0 627 aa8.79□□□□□ -1
PTPRA-203ENST00000356147 TREM2Q9NZC2 230 aa8.79□□□□□ -1
PTPRA-203ENST00000356147 GNG13Q9P2W3 67 aa8.79□□□□□ -1
PTPRA-203ENST00000356147 WSB1Q9Y6I7 421 aa8.79□□□□□ -1
PTPRA-203ENST00000356147 PRRC2CQ9Y520 2896 aaKnown RBP8.79□□□□□ -1
PTPRA-203ENST00000356147 ADAM20O43506 726 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 OR7C1O76099 320 aaPredicted RBP8.78□□□□□ -1
PTPRA-203ENST00000356147 MSR1P21757 451 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 PTGDSP41222 190 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 CCR5P51681 352 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 HERV-K104P61576 105 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 FAM189A2Q15884 450 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 ZNF774Q6NX45 483 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 ZNF880Q6PDB4 577 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 D2HGDHQ8N465 521 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 COMMD1Q8N668 190 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 OR14L1PQ8NHC6 308 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 FRZBQ92765 325 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 SNX22Q96L94 193 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 OXGR1Q96P68 337 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 METTL9Q9H1A3 318 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 MTIF3Q9H2K0 278 aaKnown RBP8.78□□□□□ -1
PTPRA-203ENST00000356147 GPR27Q9NS67 375 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 ST3GAL6Q9Y274 331 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 UBE2J1Q9Y385 318 aaPredicted RBP8.78□□□□□ -1
PTPRA-203ENST00000356147 STRAPQ9Y3F4 350 aaKnown RBP8.78□□□□□ -1
PTPRA-203ENST00000356147 NPIPB13A6NJU9 1138 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 NPIPB4C9JG80 1138 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 PROB1E7EW31 1015 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 GATCO43716 136 aaKnown RBP8.78□□□□□ -1
PTPRA-203ENST00000356147 NKX2-1P43699 371 aaPredicted RBP8.78□□□□□ -1
PTPRA-203ENST00000356147 RAB11AP62491 216 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 RPL23AP62750 156 aaKnown RBP8.78□□□□□ -1
PTPRA-203ENST00000356147 RAB1AP62820 205 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 ICAM4Q14773 271 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 MPV17LQ2QL34 196 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 GPR157Q5UAW9 335 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 ZNF468Q5VIY5 522 aaPredicted RBP8.78□□□□□ -1
PTPRA-203ENST00000356147 SLC16A14Q7RTX9 510 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 GJC3Q8NFK1 279 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 ABHD5Q8WTS1 349 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 MALSU1Q96EH3 234 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 MVB12AQ96EY5 273 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 MRGPRX4Q96LA9 322 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 HSF4Q9ULV5 492 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 TERTO14746 1132 aaKnown RBP8.78□□□□□ -1
PTPRA-203ENST00000356147 PPP1R2P9O14990 202 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 TRGC1P0CF51 173 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 NKX6-1P78426 367 aaPredicted RBP8.78□□□□□ -1
PTPRA-203ENST00000356147 NKAIN1Q4KMZ8 207 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 HIKESHIQ53FT3 197 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 TMEM252Q8N6L7 170 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 NFAM1Q8NET5 270 aaPredicted RBP8.78□□□□□ -1
PTPRA-203ENST00000356147 ZNF501Q96CX3 271 aaPredicted RBP8.78□□□□□ -1
PTPRA-203ENST00000356147 BORCS8Q96FH0 119 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 DOCK7Q96N67 2140 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 CRLF2Q9HC73 371 aa8.78□□□□□ -1
PTPRA-203ENST00000356147 KIAA2026Q5HYC2 2103 aa8.77□□□□□ -1
PTPRA-203ENST00000356147 A0A1W2PR80 420 aa8.77□□□□□ -1.01
PTPRA-203ENST00000356147 RRP8O43159 456 aaKnown RBP8.77□□□□□ -1.01
PTPRA-203ENST00000356147 PGA5P0DJD9 388 aa8.77□□□□□ -1.01
PTPRA-203ENST00000356147 NDUFB7P17568 137 aa8.77□□□□□ -1.01
PTPRA-203ENST00000356147 NPBWR2P48146 333 aa8.77□□□□□ -1.01
PTPRA-203ENST00000356147 VAMP2P63027 116 aa8.77□□□□□ -1.01
PTPRA-203ENST00000356147 LCN15Q6UWW0 184 aa8.77□□□□□ -1.01
PTPRA-203ENST00000356147 SSX9Q7RTT3 188 aa8.77□□□□□ -1.01
PTPRA-203ENST00000356147 ZNF695Q8IW36 515 aa8.77□□□□□ -1.01
PTPRA-203ENST00000356147 INTS12Q96CB8 462 aaKnown RBP8.77□□□□□ -1.01
PTPRA-203ENST00000356147 GALNT14Q96FL9 552 aa8.77□□□□□ -1.01
PTPRA-203ENST00000356147 NIPSNAP3BQ9BS92 247 aa8.77□□□□□ -1.01
PTPRA-203ENST00000356147 V9GYS6 101 aa8.77□□□□□ -1.01
PTPRA-203ENST00000356147 C3orf85A0A1B0GTC6 90 aa8.77□□□□□ -1.01
PTPRA-203ENST00000356147 SCAF4O95104 1147 aaKnown RBP8.77□□□□□ -1.01
PTPRA-203ENST00000356147 F10P00742 488 aa8.77□□□□□ -1.01
PTPRA-203ENST00000356147 LMO1P25800 156 aa8.77□□□□□ -1.01
PTPRA-203ENST00000356147 GNRHRP30968 328 aa8.77□□□□□ -1.01
PTPRA-203ENST00000356147 IL13RA2Q14627 380 aa8.77□□□□□ -1.01
PTPRA-203ENST00000356147 RAET1LQ5VY80 246 aa8.77□□□□□ -1.01
PTPRA-203ENST00000356147 NECAP1Q8NC96 275 aa8.77□□□□□ -1.01
PTPRA-203ENST00000356147 OR2M3Q8NG83 312 aa8.77□□□□□ -1.01
PTPRA-203ENST00000356147 OR4D5Q8NGN0 318 aa8.77□□□□□ -1.01
PTPRA-203ENST00000356147 PP6455Q8WZ26 134 aa8.77□□□□□ -1.01
PTPRA-203ENST00000356147 PIGCQ92535 297 aa8.77□□□□□ -1.01
PTPRA-203ENST00000356147 C8orf33Q9H7E9 229 aaPredicted RBP8.77□□□□□ -1.01
PTPRA-203ENST00000356147 CALHM2Q9HA72 323 aa8.77□□□□□ -1.01
PTPRA-203ENST00000356147 SLC7A10Q9NS82 523 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms