RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 ISLRO14498 428 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 ANKRD55Q3KP44 614 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 PATE1Q8WXA2 126 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 ICAM5Q9UMF0 924 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 CCL27Q9Y4X3 112 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 DOT1LQ8TEK3 1739 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 HSPB1P04792 205 aaKnown RBP11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 FAM157BP0CG42 384 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 BCL2P10415 239 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 GZMMP51124 257 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 DSCR4P56555 118 aaPredicted RBP11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 LEMD1Q68G75 181 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 NPEPL1Q8NDH3 523 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 OR10AD1Q8NGE0 317 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 OR1N1Q8NGS0 311 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 OR4C3Q8NH37 302 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 TRMT61AQ96FX7 289 aaKnown RBP11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 UQCR10Q9UDW1 63 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 IGHV3-64DA0A0J9YX35 117 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 OR2T8A6NH00 312 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 TRDCB7Z8K6 153 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 HLA-DQB1P01920 261 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 FCARP24071 287 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 OR3A1P47881 315 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 PSMB2P49721 201 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 OR2V1Q8NHB1 315 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 DTD1Q8TEA8 209 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 TBX21Q9UL17 535 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 GAGE10A6NGK3 116 aa11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 PAGE4O60829 102 aa11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 CFDP00746 253 aaPredicted RBP11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 DCAF12L2Q5VW00 463 aa11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 H0Y8X5 98 aa11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 SOCS1O15524 211 aa11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 HOXD4P09016 255 aaPredicted RBP11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 CTLA4P16410 223 aa11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 TCL1AP56279 114 aa11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 C12orf54Q6X4T0 127 aa11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 KMT5CQ86Y97 462 aa11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 D2HGDHQ8N465 521 aa11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 OR2D3Q8NGH3 330 aa11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 WDR13Q9H1Z4 485 aa11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 PLPP3O14495 311 aa11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 IGFBP6P24592 240 aaPredicted RBP11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 CD82P27701 267 aa11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 OPRK1P41145 380 aa11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 UBE2L3P68036 154 aaKnown RBP11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 RIGQ13278 110 aa11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 PDCD1Q15116 288 aa11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 PMCHL1Q16048 86 aa11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 GPX7Q96SL4 187 aaPredicted RBP11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 SMPD2O60906 423 aa11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 MT-ND6P03923 174 aa11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 ANKRD34CP0C6C1 535 aa11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 FDX2Q6P4F2 183 aa11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 RTN4RL1Q86UN2 441 aaPredicted RBP11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 WDFY1Q8IWB7 410 aa11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 CYB561D1Q8N8Q1 229 aa11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 TMEM116Q8NCL8 245 aa11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 OR4D11Q8NGI4 311 aa11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 OR1L3Q8NH93 324 aa11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 RPL7P18124 248 aaKnown RBP11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 MMP16P51512 607 aa11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 GMPPAQ96IJ6 420 aaPredicted RBP11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 COL25A1Q9BXS0 654 aaPredicted RBP11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 ST6GALNAC2Q9UJ37 374 aa11.26□□□□□ -0.61
SYNCRIP-201ENST00000355238 A0A1B0GU03 582 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 RCC1P18754 421 aaPredicted RBP11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 CD226Q15762 336 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 ZFP64Q9NPA5 681 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 IGSF23A1L1A6 192 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 CRYAAP02489 173 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 Q56UQ5 140 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 TSPO2Q5TGU0 170 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 MTURNQ8N3F0 131 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 OR11G2Q8NGC1 345 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 ALKBH3Q96Q83 286 aaPredicted RBP11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 KLF13Q9Y2Y9 288 aaPredicted RBP11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 PHLPP1O60346 1717 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 A0A1B0GV90 55 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 SERF2P84101 59 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 MRPL54Q6P161 138 aaKnown RBP11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 DEFB108BQ8NET1 73 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 TIMD4Q96H15 378 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 HSPB9Q9BQS6 159 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 TLNRD1Q9H1K6 362 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 OR2D2Q9H210 308 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 SHROOM3Q8TF72 1996 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 SPATA45Q537H7 98 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 FNDC7Q5VTL7 733 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 MOB3AQ96BX8 217 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 SPACA9Q96E40 222 aaPredicted RBP11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 SLC52A3Q9NQ40 469 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 NUP205Q92621 2012 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 CXorf1O96002 111 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 CSN3P07498 182 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 ZGLP1P0C6A0 271 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 HERVK_113P61574 105 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 PLPPR5Q32ZL2 321 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 PDPNQ86YL7 162 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms